Protein–RNA interactions for Protein: Q13133

NR1H3, Oxysterols receptor LXR-alpha, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3Q13133 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.03□□□□□ -1.76
NR1H3Q13133 RNU6-1240P-201ENST00000365155 104 ntBASIC4.03□□□□□ -1.76
NR1H3Q13133 Y_RNA.525-201ENST00000384570 113 ntBASIC4.03□□□□□ -1.76
NR1H3Q13133 RNU6-476P-201ENST00000384726 107 ntBASIC4.03□□□□□ -1.76
NR1H3Q13133 AC023449.1-201ENST00000454464 154 ntBASIC4.03□□□□□ -1.76
NR1H3Q13133 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.03□□□□□ -1.76
NR1H3Q13133 YWHAEP4-201ENST00000505390 198 ntBASIC4.03□□□□□ -1.76
NR1H3Q13133 Y_RNA.712-201ENST00000517011 92 ntBASIC4.03□□□□□ -1.76
NR1H3Q13133 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
NR1H3Q13133 MIR4474-201ENST00000579189 78 ntBASIC4.03□□□□□ -1.76
NR1H3Q13133 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
NR1H3Q13133 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
NR1H3Q13133 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
NR1H3Q13133 CEP170P1-201ENST00000502249 4587 ntBASIC4.03□□□□□ -1.76
NR1H3Q13133 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
NR1H3Q13133 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
NR1H3Q13133 Z82209.1-201ENST00000422141 2135 ntBASIC4.03□□□□□ -1.76
NR1H3Q13133 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.77
NR1H3Q13133 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.02□□□□□ -1.77
NR1H3Q13133 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
NR1H3Q13133 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.02□□□□□ -1.77
NR1H3Q13133 AP003122.5-201ENST00000527668 3766 ntBASIC4.02□□□□□ -1.77
NR1H3Q13133 RNU6-1336P-201ENST00000383886 109 ntBASIC4.02□□□□□ -1.77
NR1H3Q13133 RNU6-484P-201ENST00000384016 107 ntBASIC4.02□□□□□ -1.77
NR1H3Q13133 RNU6-136P-201ENST00000384663 107 ntBASIC4.02□□□□□ -1.77
NR1H3Q13133 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC4.02□□□□□ -1.77
NR1H3Q13133 AC090515.1-201ENST00000465295 476 ntBASIC4.02□□□□□ -1.77
NR1H3Q13133 FCF1P8-201ENST00000510322 597 ntBASIC4.02□□□□□ -1.77
NR1H3Q13133 AL160236.1-201ENST00000556317 195 ntBASIC4.02□□□□□ -1.77
NR1H3Q13133 MIR2681-201ENST00000581814 105 ntBASIC4.02□□□□□ -1.77
NR1H3Q13133 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.02□□□□□ -1.77
NR1H3Q13133 AC023043.3-201ENST00000593113 385 ntBASIC4.02□□□□□ -1.77
NR1H3Q13133 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
NR1H3Q13133 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.02□□□□□ -1.77
NR1H3Q13133 AC091564.4-201ENST00000533934 2194 ntBASIC4.02□□□□□ -1.77
NR1H3Q13133 SNORA71.3-201ENST00000362582 128 ntBASIC4.01□□□□□ -1.77
NR1H3Q13133 RNU6-235P-201ENST00000362644 107 ntBASIC4.01□□□□□ -1.77
NR1H3Q13133 RNA5SP124-201ENST00000362739 110 ntBASIC4.01□□□□□ -1.77
NR1H3Q13133 Y_RNA.294-201ENST00000364916 102 ntBASIC4.01□□□□□ -1.77
NR1H3Q13133 RNU6-117P-201ENST00000365415 107 ntBASIC4.01□□□□□ -1.77
NR1H3Q13133 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC4.01□□□□□ -1.77
NR1H3Q13133 DBIP2-201ENST00000419076 262 ntBASIC4.01□□□□□ -1.77
NR1H3Q13133 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC4.01□□□□□ -1.77
NR1H3Q13133 snoU13.22-201ENST00000459428 104 ntBASIC4.01□□□□□ -1.77
NR1H3Q13133 RNU1-95P-201ENST00000516357 160 ntBASIC4.01□□□□□ -1.77
NR1H3Q13133 RNU2-34P-201ENST00000516534 121 ntBASIC4.01□□□□□ -1.77
NR1H3Q13133 Y_RNA.692-201ENST00000516627 105 ntBASIC4.01□□□□□ -1.77
NR1H3Q13133 RNU1-128P-201ENST00000516704 160 ntBASIC4.01□□□□□ -1.77
NR1H3Q13133 SCARNA11.3-201ENST00000517276 130 ntBASIC4.01□□□□□ -1.77
NR1H3Q13133 AC018630.3-201ENST00000542637 96 ntBASIC4.01□□□□□ -1.77
NR1H3Q13133 AC110741.2-201ENST00000605278 268 ntBASIC4.01□□□□□ -1.77
NR1H3Q13133 AC019176.2-201ENST00000611579 315 ntBASIC4.01□□□□□ -1.77
NR1H3Q13133 AC110079.1-202ENST00000635213 138 ntBASIC4.01□□□□□ -1.77
NR1H3Q13133 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
NR1H3Q13133 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.01□□□□□ -1.77
NR1H3Q13133 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.01□□□□□ -1.77
NR1H3Q13133 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
NR1H3Q13133 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
NR1H3Q13133 RNU6-978P-201ENST00000364371 103 ntBASIC4□□□□□ -1.77
NR1H3Q13133 DYNLT3P1-201ENST00000378574 347 ntBASIC4□□□□□ -1.77
NR1H3Q13133 RNU2-70P-201ENST00000410718 179 ntBASIC4□□□□□ -1.77
NR1H3Q13133 RPL30P4-201ENST00000429309 333 ntBASIC4□□□□□ -1.77
NR1H3Q13133 AC083863.1-201ENST00000438811 231 ntBASIC4□□□□□ -1.77
NR1H3Q13133 PDCD5P2-201ENST00000507570 312 ntBASIC4□□□□□ -1.77
NR1H3Q13133 RAC1P2-201ENST00000511164 579 ntBASIC4□□□□□ -1.77
NR1H3Q13133 RNU6-965P-201ENST00000516721 96 ntBASIC4□□□□□ -1.77
NR1H3Q13133 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC4□□□□□ -1.77
NR1H3Q13133 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC4□□□□□ -1.77
NR1H3Q13133 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC4□□□□□ -1.77
NR1H3Q13133 AL929325.1-201ENST00000603096 117 ntBASIC4□□□□□ -1.77
NR1H3Q13133 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
NR1H3Q13133 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4□□□□□ -1.77
NR1H3Q13133 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4□□□□□ -1.77
NR1H3Q13133 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
NR1H3Q13133 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.99□□□□□ -1.77
NR1H3Q13133 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
NR1H3Q13133 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
NR1H3Q13133 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.99□□□□□ -1.77
NR1H3Q13133 RNA5SP119-201ENST00000362715 117 ntBASIC3.99□□□□□ -1.77
NR1H3Q13133 RNU1-72P-201ENST00000362976 153 ntBASIC3.99□□□□□ -1.77
NR1H3Q13133 SNORD46.1-201ENST00000364139 104 ntBASIC3.99□□□□□ -1.77
NR1H3Q13133 RNU6-1144P-201ENST00000384247 104 ntBASIC3.99□□□□□ -1.77
NR1H3Q13133 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
NR1H3Q13133 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
NR1H3Q13133 AL158823.1-201ENST00000418441 478 ntBASIC3.99□□□□□ -1.77
NR1H3Q13133 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.99□□□□□ -1.77
NR1H3Q13133 AC026403.1-201ENST00000518938 295 ntBASIC3.99□□□□□ -1.77
NR1H3Q13133 RPL23AP91-201ENST00000569211 455 ntBASIC3.99□□□□□ -1.77
NR1H3Q13133 AC087499.8-201ENST00000578406 226 ntBASIC3.99□□□□□ -1.77
NR1H3Q13133 MIR6129-201ENST00000616087 109 ntBASIC3.99□□□□□ -1.77
NR1H3Q13133 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
NR1H3Q13133 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
NR1H3Q13133 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
NR1H3Q13133 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
NR1H3Q13133 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
NR1H3Q13133 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
NR1H3Q13133 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.98□□□□□ -1.77
NR1H3Q13133 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.98□□□□□ -1.77
NR1H3Q13133 SNORA63.4-201ENST00000362763 126 ntBASIC3.98□□□□□ -1.77
NR1H3Q13133 Y_RNA.203-201ENST00000364106 102 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms