Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 OR2AQ1P-201ENST00000451972 200 ntBASIC2.56□□□□□ -2
DDR1Q08345 AC112771.1-201ENST00000463581 102 ntBASIC2.56□□□□□ -2
DDR1Q08345 RPL17P19-201ENST00000489069 552 ntBASIC2.56□□□□□ -2
DDR1Q08345 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.56□□□□□ -2
DDR1Q08345 RPL23AP63-201ENST00000498752 471 ntBASIC2.56□□□□□ -2
DDR1Q08345 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.56□□□□□ -2
DDR1Q08345 AC091874.1-201ENST00000511402 339 ntBASIC2.56□□□□□ -2
DDR1Q08345 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.56□□□□□ -2
DDR1Q08345 RNU6-397P-201ENST00000516226 104 ntBASIC2.56□□□□□ -2
DDR1Q08345 Y_RNA.715-201ENST00000517082 110 ntBASIC2.56□□□□□ -2
DDR1Q08345 MIR3128-201ENST00000581957 66 ntBASIC2.56□□□□□ -2
DDR1Q08345 MIR5188-201ENST00000583467 113 ntBASIC2.56□□□□□ -2
DDR1Q08345 AL355297.3-201ENST00000604082 446 ntBASIC2.56□□□□□ -2
DDR1Q08345 RAC1P9-201ENST00000604990 392 ntBASIC2.56□□□□□ -2
DDR1Q08345 snoU13.31-201ENST00000607291 104 ntBASIC2.56□□□□□ -2
DDR1Q08345 AL021879.1-201ENST00000611756 288 ntBASIC2.56□□□□□ -2
DDR1Q08345 AL159153.1-201ENST00000619688 317 ntBASIC2.56□□□□□ -2
DDR1Q08345 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.56□□□□□ -2
DDR1Q08345 AL450472.1-202ENST00000637286 180 ntBASIC2.56□□□□□ -2
DDR1Q08345 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
DDR1Q08345 RBBP8P1-201ENST00000449447 1844 ntBASIC2.56□□□□□ -2
DDR1Q08345 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.55□□□□□ -2
DDR1Q08345 Y_RNA.39-201ENST00000362620 98 ntBASIC2.55□□□□□ -2
DDR1Q08345 RNY1P16-201ENST00000363063 111 ntBASIC2.55□□□□□ -2
DDR1Q08345 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
DDR1Q08345 SNORA51.11-201ENST00000384442 131 ntBASIC2.55□□□□□ -2
DDR1Q08345 Y_RNA.556-201ENST00000384677 113 ntBASIC2.55□□□□□ -2
DDR1Q08345 Y_RNA.577-201ENST00000384794 101 ntBASIC2.55□□□□□ -2
DDR1Q08345 MIR524-201ENST00000385242 87 ntBASIC2.55□□□□□ -2
DDR1Q08345 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.55□□□□□ -2
DDR1Q08345 CYCSP48-201ENST00000417124 323 ntBASIC2.55□□□□□ -2
DDR1Q08345 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.55□□□□□ -2
DDR1Q08345 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.55□□□□□ -2
DDR1Q08345 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.55□□□□□ -2
DDR1Q08345 RNU7-169P-201ENST00000459456 61 ntBASIC2.55□□□□□ -2
DDR1Q08345 RPL30P10-201ENST00000488148 337 ntBASIC2.55□□□□□ -2
DDR1Q08345 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC2.55□□□□□ -2
DDR1Q08345 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.55□□□□□ -2
DDR1Q08345 RNU6-408P-201ENST00000515910 100 ntBASIC2.55□□□□□ -2
DDR1Q08345 RNU2-53P-201ENST00000516257 147 ntBASIC2.55□□□□□ -2
DDR1Q08345 RNY3P15-201ENST00000516297 97 ntBASIC2.55□□□□□ -2
DDR1Q08345 AC023442.1-201ENST00000531247 422 ntBASIC2.55□□□□□ -2
DDR1Q08345 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.55□□□□□ -2
DDR1Q08345 AC007375.1-201ENST00000554513 578 ntBASIC2.55□□□□□ -2
DDR1Q08345 MIR4273-201ENST00000582824 84 ntBASIC2.55□□□□□ -2
DDR1Q08345 MIR203B-201ENST00000636080 86 ntBASIC2.55□□□□□ -2
DDR1Q08345 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
DDR1Q08345 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.54□□□□□ -2
DDR1Q08345 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.54□□□□□ -2
DDR1Q08345 Y_RNA.64-201ENST00000362845 102 ntBASIC2.54□□□□□ -2
DDR1Q08345 Y_RNA.123-201ENST00000363338 102 ntBASIC2.54□□□□□ -2
DDR1Q08345 RNU6-457P-201ENST00000363999 107 ntBASIC2.54□□□□□ -2
DDR1Q08345 RNU6-1141P-201ENST00000364520 107 ntBASIC2.54□□□□□ -2
DDR1Q08345 RNU4-42P-201ENST00000364738 142 ntBASIC2.54□□□□□ -2
DDR1Q08345 Y_RNA.288-201ENST00000364854 92 ntBASIC2.54□□□□□ -2
DDR1Q08345 Y_RNA.376-201ENST00000365638 108 ntBASIC2.54□□□□□ -2
DDR1Q08345 Y_RNA.489-201ENST00000384410 101 ntBASIC2.54□□□□□ -2
DDR1Q08345 RNU4-70P-201ENST00000384579 139 ntBASIC2.54□□□□□ -2
DDR1Q08345 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.54□□□□□ -2
DDR1Q08345 SNORA26.3-201ENST00000391119 136 ntBASIC2.54□□□□□ -2
DDR1Q08345 BTF3L4P2-201ENST00000392798 346 ntBASIC2.54□□□□□ -2
DDR1Q08345 MIR1252-201ENST00000408861 65 ntBASIC2.54□□□□□ -2
DDR1Q08345 RN7SKP61-201ENST00000410642 295 ntBASIC2.54□□□□□ -2
DDR1Q08345 AC124916.1-201ENST00000444020 547 ntBASIC2.54□□□□□ -2
DDR1Q08345 AL139109.1-201ENST00000455491 297 ntBASIC2.54□□□□□ -2
DDR1Q08345 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.54□□□□□ -2
DDR1Q08345 RNU6-1132P-201ENST00000459214 107 ntBASIC2.54□□□□□ -2
DDR1Q08345 RNA5SP182-201ENST00000516064 82 ntBASIC2.54□□□□□ -2
DDR1Q08345 RNU6-475P-201ENST00000516073 104 ntBASIC2.54□□□□□ -2
DDR1Q08345 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.54□□□□□ -2
DDR1Q08345 AC040926.1-201ENST00000530195 238 ntBASIC2.54□□□□□ -2
DDR1Q08345 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.54□□□□□ -2
DDR1Q08345 AC016256.1-201ENST00000547971 354 ntBASIC2.54□□□□□ -2
DDR1Q08345 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.54□□□□□ -2
DDR1Q08345 AC073410.2-201ENST00000603240 332 ntBASIC2.54□□□□□ -2
DDR1Q08345 AC010615.1-201ENST00000594254 1764 ntBASIC2.54□□□□□ -2
DDR1Q08345 Y_RNA.105-201ENST00000363182 111 ntBASIC2.53□□□□□ -2
DDR1Q08345 Y_RNA.214-201ENST00000364201 112 ntBASIC2.53□□□□□ -2
DDR1Q08345 RNU1-57P-201ENST00000384491 166 ntBASIC2.53□□□□□ -2
DDR1Q08345 RNU6-713P-201ENST00000384761 107 ntBASIC2.53□□□□□ -2
DDR1Q08345 EIF4EP4-201ENST00000424916 578 ntBASIC2.53□□□□□ -2
DDR1Q08345 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.53□□□□□ -2
DDR1Q08345 AC099799.1-201ENST00000439809 192 ntBASIC2.53□□□□□ -2
DDR1Q08345 AC003989.2-201ENST00000440224 169 ntBASIC2.53□□□□□ -2
DDR1Q08345 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.53□□□□□ -2
DDR1Q08345 AC022616.4-201ENST00000522985 181 ntBASIC2.53□□□□□ -2
DDR1Q08345 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.53□□□□□ -2
DDR1Q08345 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.53□□□□□ -2
DDR1Q08345 AC090517.1-201ENST00000569307 266 ntBASIC2.53□□□□□ -2
DDR1Q08345 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.53□□□□□ -2
DDR1Q08345 MIR4658-201ENST00000584344 65 ntBASIC2.53□□□□□ -2
DDR1Q08345 SNRPGP19-201ENST00000603826 189 ntBASIC2.53□□□□□ -2
DDR1Q08345 AL138963.2-201ENST00000605137 226 ntBASIC2.53□□□□□ -2
DDR1Q08345 MIR1244-1-201ENST00000612829 85 ntBASIC2.53□□□□□ -2
DDR1Q08345 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.53□□□□□ -2
DDR1Q08345 MIR1244-3-201ENST00000635744 85 ntBASIC2.53□□□□□ -2
DDR1Q08345 MIR1244-2-201ENST00000636449 85 ntBASIC2.53□□□□□ -2
DDR1Q08345 MIR1244-4-202ENST00000636813 85 ntBASIC2.53□□□□□ -2
DDR1Q08345 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.53□□□□□ -2
DDR1Q08345 RNU5B-2P-201ENST00000363036 113 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms