Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 MIR4781-201ENST00000585250 76 ntBASIC1.69□□□□□ -2.14
GABPAQ06546 AC060780.3-201ENST00000589464 80 ntBASIC1.69□□□□□ -2.14
GABPAQ06546 AL359697.1-201ENST00000624879 587 ntBASIC1.69□□□□□ -2.14
GABPAQ06546 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.69□□□□□ -2.14
GABPAQ06546 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
GABPAQ06546 Y_RNA.48-201ENST00000362710 103 ntBASIC1.68□□□□□ -2.14
GABPAQ06546 Y_RNA.164-201ENST00000363709 102 ntBASIC1.68□□□□□ -2.14
GABPAQ06546 SNORA7.1-201ENST00000363750 139 ntBASIC1.68□□□□□ -2.14
GABPAQ06546 Y_RNA.505-201ENST00000384489 102 ntBASIC1.68□□□□□ -2.14
GABPAQ06546 MIR153-2-201ENST00000385225 87 ntBASIC1.68□□□□□ -2.14
GABPAQ06546 AL445305.1-201ENST00000432577 575 ntBASIC1.68□□□□□ -2.14
GABPAQ06546 AC016717.1-201ENST00000448918 286 ntBASIC1.68□□□□□ -2.14
GABPAQ06546 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.68□□□□□ -2.14
GABPAQ06546 RPL30P10-201ENST00000488148 337 ntBASIC1.68□□□□□ -2.14
GABPAQ06546 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
GABPAQ06546 RNU6-1198P-201ENST00000516904 67 ntBASIC1.68□□□□□ -2.14
GABPAQ06546 RNU1-117P-201ENST00000517041 158 ntBASIC1.68□□□□□ -2.14
GABPAQ06546 RNU6-58P-201ENST00000517143 103 ntBASIC1.68□□□□□ -2.14
GABPAQ06546 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.68□□□□□ -2.14
GABPAQ06546 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.68□□□□□ -2.14
GABPAQ06546 MIR5696-201ENST00000578474 85 ntBASIC1.68□□□□□ -2.14
GABPAQ06546 MIR5094-201ENST00000578766 85 ntBASIC1.68□□□□□ -2.14
GABPAQ06546 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.68□□□□□ -2.14
GABPAQ06546 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
GABPAQ06546 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
GABPAQ06546 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
GABPAQ06546 RNA5SP363-201ENST00000365072 115 ntBASIC1.67□□□□□ -2.14
GABPAQ06546 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.67□□□□□ -2.14
GABPAQ06546 NCOR1P3-201ENST00000420479 303 ntBASIC1.67□□□□□ -2.14
GABPAQ06546 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.67□□□□□ -2.14
GABPAQ06546 AC092473.1-201ENST00000441098 221 ntBASIC1.67□□□□□ -2.14
GABPAQ06546 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.67□□□□□ -2.14
GABPAQ06546 FGF7P6-202ENST00000451282 293 ntBASIC1.67□□□□□ -2.14
GABPAQ06546 ATP5J2P3-201ENST00000451550 258 ntBASIC1.67□□□□□ -2.14
GABPAQ06546 MTND5P5-201ENST00000503764 376 ntBASIC1.67□□□□□ -2.14
GABPAQ06546 AC067942.3-201ENST00000512025 362 ntBASIC1.67□□□□□ -2.14
GABPAQ06546 TRMT112P2-201ENST00000512910 132 ntBASIC1.67□□□□□ -2.14
GABPAQ06546 RNU7-175P-201ENST00000515915 61 ntBASIC1.67□□□□□ -2.14
GABPAQ06546 RNU6-1041P-201ENST00000516254 102 ntBASIC1.67□□□□□ -2.14
GABPAQ06546 RNU6-948P-201ENST00000516374 107 ntBASIC1.67□□□□□ -2.14
GABPAQ06546 SNORA25.14-201ENST00000516481 132 ntBASIC1.67□□□□□ -2.14
GABPAQ06546 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.67□□□□□ -2.14
GABPAQ06546 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.67□□□□□ -2.14
GABPAQ06546 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.67□□□□□ -2.14
GABPAQ06546 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.67□□□□□ -2.14
GABPAQ06546 AC022513.1-201ENST00000624512 117 ntBASIC1.67□□□□□ -2.14
GABPAQ06546 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.67□□□□□ -2.14
GABPAQ06546 CASC19-280ENST00000642102 1351 ntBASIC1.67□□□□□ -2.14
GABPAQ06546 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.67□□□□□ -2.14
GABPAQ06546 SNORD115-32-201ENST00000364079 82 ntBASIC1.66□□□□□ -2.14
GABPAQ06546 Y_RNA.238-201ENST00000364441 102 ntBASIC1.66□□□□□ -2.14
GABPAQ06546 Y_RNA.248-201ENST00000364501 109 ntBASIC1.66□□□□□ -2.14
GABPAQ06546 RNU6-392P-201ENST00000364926 101 ntBASIC1.66□□□□□ -2.14
GABPAQ06546 Y_RNA.319-201ENST00000365138 92 ntBASIC1.66□□□□□ -2.14
GABPAQ06546 RNU6-596P-201ENST00000365395 98 ntBASIC1.66□□□□□ -2.14
GABPAQ06546 Y_RNA.473-201ENST00000384333 102 ntBASIC1.66□□□□□ -2.14
GABPAQ06546 RNA5SP100-201ENST00000410903 110 ntBASIC1.66□□□□□ -2.14
GABPAQ06546 RNA5SP59-201ENST00000410922 110 ntBASIC1.66□□□□□ -2.14
GABPAQ06546 AC074085.1-201ENST00000413598 418 ntBASIC1.66□□□□□ -2.14
GABPAQ06546 MTCO3P46-201ENST00000425787 232 ntBASIC1.66□□□□□ -2.14
GABPAQ06546 AL357134.1-201ENST00000445848 426 ntBASIC1.66□□□□□ -2.14
GABPAQ06546 AC114982.1-201ENST00000469402 321 ntBASIC1.66□□□□□ -2.14
GABPAQ06546 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.66□□□□□ -2.14
GABPAQ06546 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.66□□□□□ -2.14
GABPAQ06546 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.66□□□□□ -2.14
GABPAQ06546 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.66□□□□□ -2.14
GABPAQ06546 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.66□□□□□ -2.14
GABPAQ06546 AL391987.6-201ENST00000305671 199 ntBASIC1.65□□□□□ -2.15
GABPAQ06546 RNU6-862P-201ENST00000362804 105 ntBASIC1.65□□□□□ -2.15
GABPAQ06546 Y_RNA.72-201ENST00000362894 103 ntBASIC1.65□□□□□ -2.15
GABPAQ06546 Y_RNA.160-201ENST00000363677 92 ntBASIC1.65□□□□□ -2.15
GABPAQ06546 Y_RNA.405-201ENST00000383979 100 ntBASIC1.65□□□□□ -2.15
GABPAQ06546 Y_RNA.451-201ENST00000384200 100 ntBASIC1.65□□□□□ -2.15
GABPAQ06546 RNU6-842P-201ENST00000384269 107 ntBASIC1.65□□□□□ -2.15
GABPAQ06546 RNU6-975P-201ENST00000384296 105 ntBASIC1.65□□□□□ -2.15
GABPAQ06546 Y_RNA.524-201ENST00000384564 100 ntBASIC1.65□□□□□ -2.15
GABPAQ06546 Y_RNA.561-201ENST00000384694 100 ntBASIC1.65□□□□□ -2.15
GABPAQ06546 MIR548F5-201ENST00000408421 86 ntBASIC1.65□□□□□ -2.15
GABPAQ06546 AC243428.1-201ENST00000421099 264 ntBASIC1.65□□□□□ -2.15
GABPAQ06546 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.65□□□□□ -2.15
GABPAQ06546 RPS3AP52-201ENST00000435639 297 ntBASIC1.65□□□□□ -2.15
GABPAQ06546 SNORD5.1-201ENST00000458800 75 ntBASIC1.65□□□□□ -2.15
GABPAQ06546 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.65□□□□□ -2.15
GABPAQ06546 AL590705.4-201ENST00000532209 134 ntBASIC1.65□□□□□ -2.15
GABPAQ06546 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.65□□□□□ -2.15
GABPAQ06546 MIR4713-201ENST00000582691 75 ntBASIC1.65□□□□□ -2.15
GABPAQ06546 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.65□□□□□ -2.15
GABPAQ06546 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
GABPAQ06546 ZNF299P-201ENST00000406845 1804 ntBASIC1.64□□□□□ -2.15
GABPAQ06546 Y_RNA.2-201ENST00000362330 96 ntBASIC1.64□□□□□ -2.15
GABPAQ06546 RNY1P10-201ENST00000363268 113 ntBASIC1.64□□□□□ -2.15
GABPAQ06546 RNU6-767P-201ENST00000384132 107 ntBASIC1.64□□□□□ -2.15
GABPAQ06546 RNU6-876P-201ENST00000391295 104 ntBASIC1.64□□□□□ -2.15
GABPAQ06546 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
GABPAQ06546 AL033519.2-201ENST00000403958 392 ntBASIC1.64□□□□□ -2.15
GABPAQ06546 MIR548K-201ENST00000408406 116 ntBASIC1.64□□□□□ -2.15
GABPAQ06546 AC009310.1-201ENST00000414414 451 ntBASIC1.64□□□□□ -2.15
GABPAQ06546 RPL21P111-201ENST00000418453 477 ntBASIC1.64□□□□□ -2.15
GABPAQ06546 AC060773.1-201ENST00000421698 310 ntBASIC1.64□□□□□ -2.15
GABPAQ06546 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms