Protein–RNA interactions for Protein: Q00341

HDLBP, Vigilin, humanhuman

Known RBP Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBPQ00341 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
HDLBPQ00341 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.47□□□□□ -1.85
HDLBPQ00341 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.47□□□□□ -1.85
HDLBPQ00341 RNU1-23P-201ENST00000363361 144 ntBASIC3.47□□□□□ -1.85
HDLBPQ00341 U8.9-201ENST00000365667 134 ntBASIC3.47□□□□□ -1.85
HDLBPQ00341 Y_RNA.478-201ENST00000384358 107 ntBASIC3.47□□□□□ -1.85
HDLBPQ00341 MIR215-201ENST00000384858 110 ntBASIC3.47□□□□□ -1.85
HDLBPQ00341 MIR887-201ENST00000401258 79 ntBASIC3.47□□□□□ -1.85
HDLBPQ00341 RNU2-54P-201ENST00000410299 190 ntBASIC3.47□□□□□ -1.85
HDLBPQ00341 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.47□□□□□ -1.85
HDLBPQ00341 AC108938.1-201ENST00000451204 136 ntBASIC3.47□□□□□ -1.85
HDLBPQ00341 SUMO1P2-201ENST00000452524 304 ntBASIC3.47□□□□□ -1.85
HDLBPQ00341 AL109933.2-201ENST00000452651 260 ntBASIC3.47□□□□□ -1.85
HDLBPQ00341 RN7SL429P-201ENST00000479090 223 ntBASIC3.47□□□□□ -1.85
HDLBPQ00341 RN7SL489P-201ENST00000486185 223 ntBASIC3.47□□□□□ -1.85
HDLBPQ00341 RN7SL327P-201ENST00000488659 223 ntBASIC3.47□□□□□ -1.85
HDLBPQ00341 RNU2-34P-201ENST00000516534 121 ntBASIC3.47□□□□□ -1.85
HDLBPQ00341 RN7SKP40-201ENST00000517211 242 ntBASIC3.47□□□□□ -1.85
HDLBPQ00341 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC3.47□□□□□ -1.85
HDLBPQ00341 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.47□□□□□ -1.85
HDLBPQ00341 AL109918.3-201ENST00000603072 338 ntBASIC3.47□□□□□ -1.85
HDLBPQ00341 AL590240.4-201ENST00000616908 390 ntBASIC3.47□□□□□ -1.85
HDLBPQ00341 RN7SL853P-201ENST00000617250 223 ntBASIC3.47□□□□□ -1.85
HDLBPQ00341 AC091932.3-201ENST00000624223 323 ntBASIC3.47□□□□□ -1.85
HDLBPQ00341 AC127459.3-201ENST00000624328 466 ntBASIC3.47□□□□□ -1.85
HDLBPQ00341 MTND5P6-201ENST00000422338 1798 ntBASIC3.47□□□□□ -1.85
HDLBPQ00341 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
HDLBPQ00341 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
HDLBPQ00341 AC092593.1-201ENST00000515413 1815 ntBASIC3.47□□□□□ -1.85
HDLBPQ00341 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.46□□□□□ -1.86
HDLBPQ00341 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
HDLBPQ00341 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
HDLBPQ00341 Y_RNA.14-201ENST00000362415 103 ntBASIC3.46□□□□□ -1.86
HDLBPQ00341 RNU6-545P-201ENST00000362681 104 ntBASIC3.46□□□□□ -1.86
HDLBPQ00341 RNA5SP125-201ENST00000364843 120 ntBASIC3.46□□□□□ -1.86
HDLBPQ00341 RPL21P3-201ENST00000395517 478 ntBASIC3.46□□□□□ -1.86
HDLBPQ00341 RNU4-30P-201ENST00000410245 143 ntBASIC3.46□□□□□ -1.86
HDLBPQ00341 AC139712.2-201ENST00000424302 339 ntBASIC3.46□□□□□ -1.86
HDLBPQ00341 POLR2KP2-201ENST00000438155 177 ntBASIC3.46□□□□□ -1.86
HDLBPQ00341 AC016925.1-201ENST00000458303 298 ntBASIC3.46□□□□□ -1.86
HDLBPQ00341 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.46□□□□□ -1.86
HDLBPQ00341 RNU6-1338P-201ENST00000516328 91 ntBASIC3.46□□□□□ -1.86
HDLBPQ00341 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.46□□□□□ -1.86
HDLBPQ00341 AC090616.3-201ENST00000582184 217 ntBASIC3.46□□□□□ -1.86
HDLBPQ00341 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.46□□□□□ -1.86
HDLBPQ00341 AC093831.2-201ENST00000624393 3427 ntBASIC3.45□□□□□ -1.86
HDLBPQ00341 RNU6-326P-201ENST00000365480 107 ntBASIC3.45□□□□□ -1.86
HDLBPQ00341 Y_RNA.541-201ENST00000384640 113 ntBASIC3.45□□□□□ -1.86
HDLBPQ00341 Y_RNA.569-201ENST00000384749 103 ntBASIC3.45□□□□□ -1.86
HDLBPQ00341 MIR9-1-201ENST00000385198 89 ntBASIC3.45□□□□□ -1.86
HDLBPQ00341 SNORA26.7-201ENST00000391288 122 ntBASIC3.45□□□□□ -1.86
HDLBPQ00341 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC3.45□□□□□ -1.86
HDLBPQ00341 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.45□□□□□ -1.86
HDLBPQ00341 AC104389.3-201ENST00000445629 235 ntBASIC3.45□□□□□ -1.86
HDLBPQ00341 HSPE1P25-201ENST00000455484 251 ntBASIC3.45□□□□□ -1.86
HDLBPQ00341 AC107222.1-201ENST00000510899 637 ntBASIC3.45□□□□□ -1.86
HDLBPQ00341 RNU6-948P-201ENST00000516374 107 ntBASIC3.45□□□□□ -1.86
HDLBPQ00341 AC079600.2-201ENST00000550076 130 ntBASIC3.45□□□□□ -1.86
HDLBPQ00341 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.45□□□□□ -1.86
HDLBPQ00341 AP001282.2-201ENST00000616149 309 ntBASIC3.45□□□□□ -1.86
HDLBPQ00341 SDR42E1P4-201ENST00000620894 481 ntBASIC3.45□□□□□ -1.86
HDLBPQ00341 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.45□□□□□ -1.86
HDLBPQ00341 IGHVIII-44-202ENST00000636235 289 ntBASIC3.45□□□□□ -1.86
HDLBPQ00341 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
HDLBPQ00341 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HDLBPQ00341 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HDLBPQ00341 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.45□□□□□ -1.86
HDLBPQ00341 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.44□□□□□ -1.86
HDLBPQ00341 RNA5SP126-201ENST00000365092 109 ntBASIC3.44□□□□□ -1.86
HDLBPQ00341 Y_RNA.446-201ENST00000384178 104 ntBASIC3.44□□□□□ -1.86
HDLBPQ00341 RNU6-514P-201ENST00000384208 107 ntBASIC3.44□□□□□ -1.86
HDLBPQ00341 Y_RNA.562-201ENST00000384695 113 ntBASIC3.44□□□□□ -1.86
HDLBPQ00341 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.44□□□□□ -1.86
HDLBPQ00341 RNA5SP492-201ENST00000411330 114 ntBASIC3.44□□□□□ -1.86
HDLBPQ00341 AC024067.1-201ENST00000426199 223 ntBASIC3.44□□□□□ -1.86
HDLBPQ00341 AC009238.1-201ENST00000442165 424 ntBASIC3.44□□□□□ -1.86
HDLBPQ00341 AC009237.6-201ENST00000446969 424 ntBASIC3.44□□□□□ -1.86
HDLBPQ00341 HMGN2P18-201ENST00000450680 270 ntBASIC3.44□□□□□ -1.86
HDLBPQ00341 AL137159.1-201ENST00000452808 512 ntBASIC3.44□□□□□ -1.86
HDLBPQ00341 RN7SL75P-201ENST00000461926 281 ntBASIC3.44□□□□□ -1.86
HDLBPQ00341 ATP5EP1-201ENST00000510257 156 ntBASIC3.44□□□□□ -1.86
HDLBPQ00341 RNU6-155P-201ENST00000516347 100 ntBASIC3.44□□□□□ -1.86
HDLBPQ00341 RNU2-31P-201ENST00000516954 155 ntBASIC3.44□□□□□ -1.86
HDLBPQ00341 DEFB108E-201ENST00000524692 240 ntBASIC3.44□□□□□ -1.86
HDLBPQ00341 AC007536.1-201ENST00000533382 349 ntBASIC3.44□□□□□ -1.86
HDLBPQ00341 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.44□□□□□ -1.86
HDLBPQ00341 MIR1248-201ENST00000629190 106 ntBASIC3.44□□□□□ -1.86
HDLBPQ00341 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
HDLBPQ00341 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.44□□□□□ -1.86
HDLBPQ00341 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
HDLBPQ00341 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HDLBPQ00341 AC008264.2-201ENST00000610193 3731 ntBASIC3.43□□□□□ -1.86
HDLBPQ00341 AL136360.1-201ENST00000503377 1900 ntBASIC3.43□□□□□ -1.86
HDLBPQ00341 Y_RNA.237-201ENST00000364439 102 ntBASIC3.43□□□□□ -1.86
HDLBPQ00341 Y_RNA.307-201ENST00000365022 117 ntBASIC3.43□□□□□ -1.86
HDLBPQ00341 RNU6-301P-201ENST00000384277 107 ntBASIC3.43□□□□□ -1.86
HDLBPQ00341 RNU6-975P-201ENST00000384296 105 ntBASIC3.43□□□□□ -1.86
HDLBPQ00341 RNU6-102P-201ENST00000384485 104 ntBASIC3.43□□□□□ -1.86
HDLBPQ00341 MIR548B-201ENST00000385247 97 ntBASIC3.43□□□□□ -1.86
HDLBPQ00341 RNU2-38P-201ENST00000410856 79 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms