Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 C1DP2-201ENST00000418167 426 ntBASIC-0.4□□□□□ -2.47
PRKDCP78527 C1DP4-201ENST00000455429 424 ntBASIC-0.4□□□□□ -2.47
PRKDCP78527 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC-0.4□□□□□ -2.47
PRKDCP78527 AL451064.1-201ENST00000607718 471 ntBASIC-0.4□□□□□ -2.47
PRKDCP78527 RNU6-142P-201ENST00000384019 107 ntBASIC-0.41□□□□□ -2.47
PRKDCP78527 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC-0.41□□□□□ -2.47
PRKDCP78527 AC106883.1-201ENST00000418805 562 ntBASIC-0.41□□□□□ -2.47
PRKDCP78527 MTCO1P57-201ENST00000432182 261 ntBASIC-0.41□□□□□ -2.47
PRKDCP78527 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC-0.41□□□□□ -2.47
PRKDCP78527 AC010531.2-201ENST00000465012 153 ntBASIC-0.41□□□□□ -2.47
PRKDCP78527 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC-0.41□□□□□ -2.47
PRKDCP78527 MIR6079-201ENST00000635807 62 ntBASIC-0.41□□□□□ -2.47
PRKDCP78527 Y_RNA.234-201ENST00000364409 97 ntBASIC-0.41□□□□□ -2.48
PRKDCP78527 MIR16-1-201ENST00000385271 89 ntBASIC-0.41□□□□□ -2.48
PRKDCP78527 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC-0.41□□□□□ -2.48
PRKDCP78527 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC-0.41□□□□□ -2.48
PRKDCP78527 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC-0.41□□□□□ -2.48
PRKDCP78527 AC107297.1-201ENST00000459991 176 ntBASIC-0.41□□□□□ -2.48
PRKDCP78527 AC114755.3-201ENST00000481111 251 ntBASIC-0.41□□□□□ -2.48
PRKDCP78527 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC-0.41□□□□□ -2.48
PRKDCP78527 RNU7-129P-201ENST00000516128 62 ntBASIC-0.41□□□□□ -2.48
PRKDCP78527 RNA5SP94-201ENST00000516917 108 ntBASIC-0.41□□□□□ -2.48
PRKDCP78527 UBE2Q2P8-201ENST00000560644 102 ntBASIC-0.41□□□□□ -2.48
PRKDCP78527 SNORD38B-202ENST00000625943 69 ntBASIC-0.41□□□□□ -2.48
PRKDCP78527 SNORA2B-201ENST00000384583 137 ntBASIC-0.41□□□□□ -2.48
PRKDCP78527 MIR549A-201ENST00000385268 96 ntBASIC-0.41□□□□□ -2.48
PRKDCP78527 AL953862.1-201ENST00000423016 168 ntBASIC-0.41□□□□□ -2.48
PRKDCP78527 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC-0.41□□□□□ -2.48
PRKDCP78527 HSFY5P-201ENST00000453726 309 ntBASIC-0.41□□□□□ -2.48
PRKDCP78527 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC-0.41□□□□□ -2.48
PRKDCP78527 RNU6-914P-201ENST00000516749 109 ntBASIC-0.41□□□□□ -2.48
PRKDCP78527 AC100830.2-201ENST00000581636 240 ntBASIC-0.41□□□□□ -2.48
PRKDCP78527 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC-0.41□□□□□ -2.48
PRKDCP78527 Y_RNA.287-201ENST00000364853 94 ntBASIC-0.42□□□□□ -2.48
PRKDCP78527 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC-0.42□□□□□ -2.48
PRKDCP78527 AC244670.1-201ENST00000436879 112 ntBASIC-0.42□□□□□ -2.48
PRKDCP78527 AC016925.1-201ENST00000458303 298 ntBASIC-0.42□□□□□ -2.48
PRKDCP78527 AC109445.1-201ENST00000512356 383 ntBASIC-0.42□□□□□ -2.48
PRKDCP78527 RNA5SP135-201ENST00000517019 125 ntBASIC-0.42□□□□□ -2.48
PRKDCP78527 RNU6-1315P-201ENST00000517187 99 ntBASIC-0.42□□□□□ -2.48
PRKDCP78527 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC-0.42□□□□□ -2.48
PRKDCP78527 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-0.42□□□□□ -2.48
PRKDCP78527 Y_RNA.548-201ENST00000384656 105 ntBASIC-0.42□□□□□ -2.48
PRKDCP78527 MIR454-201ENST00000390180 115 ntBASIC-0.42□□□□□ -2.48
PRKDCP78527 SNORA12.2-201ENST00000391040 156 ntBASIC-0.42□□□□□ -2.48
PRKDCP78527 USP9YP28-201ENST00000435142 589 ntBASIC-0.42□□□□□ -2.48
PRKDCP78527 FGF7P1-201ENST00000582820 288 ntBASIC-0.42□□□□□ -2.48
PRKDCP78527 BX322639.1-202ENST00000423987 2213 ntBASIC-0.42□□□□□ -2.48
PRKDCP78527 SNORD114-11-201ENST00000363738 75 ntBASIC-0.42□□□□□ -2.48
PRKDCP78527 RNU6-447P-201ENST00000410293 104 ntBASIC-0.42□□□□□ -2.48
PRKDCP78527 RNU6-1118P-201ENST00000410382 104 ntBASIC-0.42□□□□□ -2.48
PRKDCP78527 RNU6-1076P-201ENST00000410397 104 ntBASIC-0.42□□□□□ -2.48
PRKDCP78527 RNU6-355P-201ENST00000410427 104 ntBASIC-0.42□□□□□ -2.48
PRKDCP78527 RNU6-791P-201ENST00000410467 104 ntBASIC-0.42□□□□□ -2.48
PRKDCP78527 RNU6-705P-201ENST00000410601 104 ntBASIC-0.42□□□□□ -2.48
PRKDCP78527 RNU6-1100P-201ENST00000410691 104 ntBASIC-0.42□□□□□ -2.48
PRKDCP78527 RNU6-860P-201ENST00000410860 104 ntBASIC-0.42□□□□□ -2.48
PRKDCP78527 RNU6-1217P-201ENST00000411276 104 ntBASIC-0.42□□□□□ -2.48
PRKDCP78527 RNU6-785P-201ENST00000411324 104 ntBASIC-0.42□□□□□ -2.48
PRKDCP78527 AL606517.2-201ENST00000442855 241 ntBASIC-0.42□□□□□ -2.48
PRKDCP78527 Y_RNA.674-201ENST00000516362 113 ntBASIC-0.42□□□□□ -2.48
PRKDCP78527 LRRC34P1-201ENST00000542742 915 ntBASIC-0.42□□□□□ -2.48
PRKDCP78527 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC-0.42□□□□□ -2.48
PRKDCP78527 AC080078.2-201ENST00000603766 501 ntBASIC-0.42□□□□□ -2.48
PRKDCP78527 U6.90-201ENST00000614007 104 ntBASIC-0.42□□□□□ -2.48
PRKDCP78527 U6.70-201ENST00000620287 104 ntBASIC-0.42□□□□□ -2.48
PRKDCP78527 RNY1P7-201ENST00000384743 110 ntBASIC-0.43□□□□□ -2.48
PRKDCP78527 snoU109.2-201ENST00000459316 135 ntBASIC-0.43□□□□□ -2.48
PRKDCP78527 RN7SKP164-201ENST00000516138 266 ntBASIC-0.43□□□□□ -2.48
PRKDCP78527 AP003716.2-201ENST00000528260 108 ntBASIC-0.43□□□□□ -2.48
PRKDCP78527 Z99497.2-201ENST00000603634 310 ntBASIC-0.43□□□□□ -2.48
PRKDCP78527 Y_RNA.439-201ENST00000384119 94 ntBASIC-0.43□□□□□ -2.48
PRKDCP78527 SNORA67.2-201ENST00000384300 149 ntBASIC-0.43□□□□□ -2.48
PRKDCP78527 RNU6-364P-201ENST00000384387 107 ntBASIC-0.43□□□□□ -2.48
PRKDCP78527 Y_RNA.562-201ENST00000384695 113 ntBASIC-0.43□□□□□ -2.48
PRKDCP78527 SNORA26.3-201ENST00000391119 136 ntBASIC-0.43□□□□□ -2.48
PRKDCP78527 SNORD111-201ENST00000408139 94 ntBASIC-0.43□□□□□ -2.48
PRKDCP78527 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC-0.43□□□□□ -2.48
PRKDCP78527 AC104563.1-201ENST00000476147 376 ntBASIC-0.43□□□□□ -2.48
PRKDCP78527 AC091885.1-201ENST00000506658 268 ntBASIC-0.43□□□□□ -2.48
PRKDCP78527 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.43□□□□□ -2.48
PRKDCP78527 AC009902.1-201ENST00000519351 183 ntBASIC-0.43□□□□□ -2.48
PRKDCP78527 RBM11P1-201ENST00000604951 799 ntBASIC-0.43□□□□□ -2.48
PRKDCP78527 RNU6-673P-201ENST00000365084 104 ntBASIC-0.43□□□□□ -2.48
PRKDCP78527 RNU6-744P-201ENST00000365557 107 ntBASIC-0.43□□□□□ -2.48
PRKDCP78527 RNU6-1316P-201ENST00000384242 108 ntBASIC-0.43□□□□□ -2.48
PRKDCP78527 RNY4P36-201ENST00000391116 96 ntBASIC-0.43□□□□□ -2.48
PRKDCP78527 AP000870.1-201ENST00000472927 406 ntBASIC-0.43□□□□□ -2.48
PRKDCP78527 RN7SKP19-201ENST00000516016 252 ntBASIC-0.43□□□□□ -2.48
PRKDCP78527 MTND1P36-201ENST00000522384 936 ntBASIC-0.43□□□□□ -2.48
PRKDCP78527 ELOCP32-201ENST00000548625 324 ntBASIC-0.43□□□□□ -2.48
PRKDCP78527 MIR544A-201ENST00000384855 91 ntBASIC-0.44□□□□□ -2.48
PRKDCP78527 MIR562-201ENST00000384894 95 ntBASIC-0.44□□□□□ -2.48
PRKDCP78527 MTCO3P43-201ENST00000440974 771 ntBASIC-0.44□□□□□ -2.48
PRKDCP78527 NDUFB1P2-201ENST00000449477 176 ntBASIC-0.44□□□□□ -2.48
PRKDCP78527 AP000568.1-201ENST00000282964 442 ntBASIC-0.44□□□□□ -2.48
PRKDCP78527 SNORD114-14-201ENST00000362723 75 ntBASIC-0.44□□□□□ -2.48
PRKDCP78527 RNU6-839P-201ENST00000363347 108 ntBASIC-0.44□□□□□ -2.48
PRKDCP78527 RNU2-3P-201ENST00000410144 191 ntBASIC-0.44□□□□□ -2.48
PRKDCP78527 AL162725.1-201ENST00000435405 301 ntBASIC-0.44□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms