Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 MTND3P9-201ENST00000429526 346 ntBASIC1.24□□□□□ -2.21
IRX3P78415 MRPS10P2-201ENST00000431226 381 ntBASIC1.24□□□□□ -2.21
IRX3P78415 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.24□□□□□ -2.21
IRX3P78415 MTND1P29-201ENST00000448112 647 ntBASIC1.24□□□□□ -2.21
IRX3P78415 NFU1P2-201ENST00000448700 469 ntBASIC1.24□□□□□ -2.21
IRX3P78415 TPT1P7-201ENST00000458300 517 ntBASIC1.24□□□□□ -2.21
IRX3P78415 MRPS36P4-201ENST00000534436 298 ntBASIC1.24□□□□□ -2.21
IRX3P78415 MIR5006-201ENST00000583027 110 ntBASIC1.24□□□□□ -2.21
IRX3P78415 PIGPP4-201ENST00000584447 307 ntBASIC1.24□□□□□ -2.21
IRX3P78415 Z99129.1-201ENST00000612510 255 ntBASIC1.24□□□□□ -2.21
IRX3P78415 DISC2.1-201ENST00000612827 205 ntBASIC1.24□□□□□ -2.21
IRX3P78415 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.24□□□□□ -2.21
IRX3P78415 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.24□□□□□ -2.21
IRX3P78415 OR5AK4P-201ENST00000635912 903 ntBASIC1.24□□□□□ -2.21
IRX3P78415 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.23□□□□□ -2.21
IRX3P78415 Y_RNA.123-201ENST00000363338 102 ntBASIC1.23□□□□□ -2.21
IRX3P78415 RNU1-96P-201ENST00000364163 162 ntBASIC1.23□□□□□ -2.21
IRX3P78415 RNU6-877P-201ENST00000383868 107 ntBASIC1.23□□□□□ -2.21
IRX3P78415 RNU6-950P-201ENST00000384651 107 ntBASIC1.23□□□□□ -2.21
IRX3P78415 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
IRX3P78415 MIR450B-201ENST00000401182 78 ntBASIC1.23□□□□□ -2.21
IRX3P78415 RNU2-66P-201ENST00000410650 161 ntBASIC1.23□□□□□ -2.21
IRX3P78415 RNU2-16P-201ENST00000410712 136 ntBASIC1.23□□□□□ -2.21
IRX3P78415 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.23□□□□□ -2.21
IRX3P78415 HSPE1P9-201ENST00000440046 311 ntBASIC1.23□□□□□ -2.21
IRX3P78415 AC004386.2-201ENST00000441858 148 ntBASIC1.23□□□□□ -2.21
IRX3P78415 MTND1P1-201ENST00000445453 368 ntBASIC1.23□□□□□ -2.21
IRX3P78415 AC011406.1-201ENST00000512440 370 ntBASIC1.23□□□□□ -2.21
IRX3P78415 RNU6-344P-201ENST00000516635 111 ntBASIC1.23□□□□□ -2.21
IRX3P78415 AC024995.1-201ENST00000523014 93 ntBASIC1.23□□□□□ -2.21
IRX3P78415 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.23□□□□□ -2.21
IRX3P78415 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.23□□□□□ -2.21
IRX3P78415 AL512360.1-201ENST00000555346 234 ntBASIC1.23□□□□□ -2.21
IRX3P78415 AL118558.2-201ENST00000556294 238 ntBASIC1.23□□□□□ -2.21
IRX3P78415 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.23□□□□□ -2.21
IRX3P78415 SNORA77B-201ENST00000578179 125 ntBASIC1.23□□□□□ -2.21
IRX3P78415 AC012676.2-201ENST00000619258 186 ntBASIC1.23□□□□□ -2.21
IRX3P78415 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
IRX3P78415 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.23□□□□□ -2.21
IRX3P78415 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.23□□□□□ -2.21
IRX3P78415 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
IRX3P78415 RNU6-862P-201ENST00000362804 105 ntBASIC1.22□□□□□ -2.21
IRX3P78415 SNORD113-7-201ENST00000363762 77 ntBASIC1.22□□□□□ -2.21
IRX3P78415 RNU6-271P-201ENST00000363858 105 ntBASIC1.22□□□□□ -2.21
IRX3P78415 RNU6-325P-201ENST00000411132 105 ntBASIC1.22□□□□□ -2.21
IRX3P78415 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.22□□□□□ -2.21
IRX3P78415 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.22□□□□□ -2.21
IRX3P78415 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1.22□□□□□ -2.21
IRX3P78415 USP9YP14-201ENST00000430663 563 ntBASIC1.22□□□□□ -2.21
IRX3P78415 AC099677.2-201ENST00000436385 175 ntBASIC1.22□□□□□ -2.21
IRX3P78415 RPL39P28-201ENST00000465655 155 ntBASIC1.22□□□□□ -2.21
IRX3P78415 RPS26P55-201ENST00000471178 356 ntBASIC1.22□□□□□ -2.21
IRX3P78415 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.22□□□□□ -2.21
IRX3P78415 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC1.22□□□□□ -2.21
IRX3P78415 AC024909.2-201ENST00000553035 286 ntBASIC1.22□□□□□ -2.21
IRX3P78415 AC016727.2-201ENST00000603988 621 ntBASIC1.22□□□□□ -2.21
IRX3P78415 RNU6-89P-201ENST00000606519 100 ntBASIC1.22□□□□□ -2.21
IRX3P78415 AL133215.3-201ENST00000609801 448 ntBASIC1.22□□□□□ -2.21
IRX3P78415 AL121757.2-201ENST00000611223 313 ntBASIC1.22□□□□□ -2.21
IRX3P78415 AC245060.5-201ENST00000610778 3293 ntBASIC1.22□□□□□ -2.21
IRX3P78415 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
IRX3P78415 RNU6-545P-201ENST00000362681 104 ntBASIC1.21□□□□□ -2.22
IRX3P78415 Y_RNA.167-201ENST00000363735 109 ntBASIC1.21□□□□□ -2.22
IRX3P78415 SNORD115-8-201ENST00000363856 82 ntBASIC1.21□□□□□ -2.22
IRX3P78415 SNORD115-38-201ENST00000365037 82 ntBASIC1.21□□□□□ -2.22
IRX3P78415 RNU4-20P-201ENST00000365601 151 ntBASIC1.21□□□□□ -2.22
IRX3P78415 AL117342.1-201ENST00000404861 406 ntBASIC1.21□□□□□ -2.22
IRX3P78415 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.21□□□□□ -2.22
IRX3P78415 ZNF885P-201ENST00000420174 1098 ntBASIC1.21□□□□□ -2.22
IRX3P78415 AC008134.1-201ENST00000420943 193 ntBASIC1.21□□□□□ -2.22
IRX3P78415 AC245047.4-201ENST00000433189 144 ntBASIC1.21□□□□□ -2.22
IRX3P78415 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.21□□□□□ -2.22
IRX3P78415 AL353572.1-201ENST00000442490 417 ntBASIC1.21□□□□□ -2.22
IRX3P78415 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC1.21□□□□□ -2.22
IRX3P78415 RNU7-40P-201ENST00000516397 64 ntBASIC1.21□□□□□ -2.22
IRX3P78415 AC019176.1-201ENST00000518519 225 ntBASIC1.21□□□□□ -2.22
IRX3P78415 AC104576.1-201ENST00000524225 88 ntBASIC1.21□□□□□ -2.22
IRX3P78415 MTND1P35-201ENST00000526739 508 ntBASIC1.21□□□□□ -2.22
IRX3P78415 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.21□□□□□ -2.22
IRX3P78415 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.21□□□□□ -2.22
IRX3P78415 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.21□□□□□ -2.22
IRX3P78415 AC068792.1-201ENST00000621354 417 ntBASIC1.21□□□□□ -2.22
IRX3P78415 Y_RNA.100-201ENST00000363141 102 ntBASIC1.2□□□□□ -2.22
IRX3P78415 RNU6-254P-201ENST00000363377 107 ntBASIC1.2□□□□□ -2.22
IRX3P78415 SNORD115-32-201ENST00000364079 82 ntBASIC1.2□□□□□ -2.22
IRX3P78415 Y_RNA.530-201ENST00000384587 101 ntBASIC1.2□□□□□ -2.22
IRX3P78415 MIR521-1-201ENST00000384902 87 ntBASIC1.2□□□□□ -2.22
IRX3P78415 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
IRX3P78415 DAP3P1-201ENST00000441522 278 ntBASIC1.2□□□□□ -2.22
IRX3P78415 RPS29P28-201ENST00000446439 141 ntBASIC1.2□□□□□ -2.22
IRX3P78415 Z83846.1-201ENST00000446798 265 ntBASIC1.2□□□□□ -2.22
IRX3P78415 NDUFB4P10-201ENST00000452541 359 ntBASIC1.2□□□□□ -2.22
IRX3P78415 AC019235.1-201ENST00000503847 207 ntBASIC1.2□□□□□ -2.22
IRX3P78415 RNU6-1038P-201ENST00000516516 104 ntBASIC1.2□□□□□ -2.22
IRX3P78415 RNA5SP384-201ENST00000516615 116 ntBASIC1.2□□□□□ -2.22
IRX3P78415 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
IRX3P78415 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.2□□□□□ -2.22
IRX3P78415 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.2□□□□□ -2.22
IRX3P78415 AC211469.2-201ENST00000605461 205 ntBASIC1.2□□□□□ -2.22
IRX3P78415 SNORD114-21-201ENST00000606412 72 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms