Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 RNU7-128P-201ENST00000517247 62 ntBASIC0.06□□□□□ -2.4
LSM6P62312 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC0.06□□□□□ -2.4
LSM6P62312 AC068790.2-201ENST00000602601 557 ntBASIC0.06□□□□□ -2.4
LSM6P62312 AC138749.5-201ENST00000611461 208 ntBASIC0.06□□□□□ -2.4
LSM6P62312 AC104010.1-201ENST00000616889 150 ntBASIC0.06□□□□□ -2.4
LSM6P62312 AC004808.1-201ENST00000627671 721 ntBASIC0.06□□□□□ -2.4
LSM6P62312 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.05□□□□□ -2.4
LSM6P62312 Y_RNA.265-201ENST00000364677 108 ntBASIC0.05□□□□□ -2.4
LSM6P62312 MIR562-201ENST00000384894 95 ntBASIC0.05□□□□□ -2.4
LSM6P62312 SNORD105-201ENST00000386910 85 ntBASIC0.05□□□□□ -2.4
LSM6P62312 RNU6-177P-201ENST00000411257 104 ntBASIC0.05□□□□□ -2.4
LSM6P62312 CALM2P4-201ENST00000430810 426 ntBASIC0.05□□□□□ -2.4
LSM6P62312 AC007215.1-201ENST00000464893 276 ntBASIC0.05□□□□□ -2.4
LSM6P62312 RNU7-12P-201ENST00000516030 62 ntBASIC0.05□□□□□ -2.4
LSM6P62312 SCARNA24.1-201ENST00000516465 137 ntBASIC0.05□□□□□ -2.4
LSM6P62312 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.05□□□□□ -2.4
LSM6P62312 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC0.05□□□□□ -2.4
LSM6P62312 PCMTD1P2-201ENST00000565017 355 ntBASIC0.05□□□□□ -2.4
LSM6P62312 AL607023.1-201ENST00000620045 248 ntBASIC0.05□□□□□ -2.4
LSM6P62312 AL078595.3-201ENST00000623815 1166 ntBASIC0.05□□□□□ -2.4
LSM6P62312 AC010487.4-201ENST00000637027 61 ntBASIC0.05□□□□□ -2.4
LSM6P62312 AC100810.6-201ENST00000638068 285 ntBASIC0.05□□□□□ -2.4
LSM6P62312 RNU6-1266P-201ENST00000362794 105 ntBASIC0.04□□□□□ -2.4
LSM6P62312 RNU6-660P-201ENST00000364566 109 ntBASIC0.04□□□□□ -2.4
LSM6P62312 U8.16-201ENST00000391279 133 ntBASIC0.04□□□□□ -2.4
LSM6P62312 MIR1295A-201ENST00000408463 79 ntBASIC0.04□□□□□ -2.4
LSM6P62312 RNU6-994P-201ENST00000410507 111 ntBASIC0.04□□□□□ -2.4
LSM6P62312 RNA5SP494-201ENST00000410653 129 ntBASIC0.04□□□□□ -2.4
LSM6P62312 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC0.04□□□□□ -2.4
LSM6P62312 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC0.04□□□□□ -2.4
LSM6P62312 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.04□□□□□ -2.4
LSM6P62312 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC0.04□□□□□ -2.4
LSM6P62312 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.04□□□□□ -2.4
LSM6P62312 RNU6-344P-201ENST00000516635 111 ntBASIC0.04□□□□□ -2.4
LSM6P62312 RNU6-410P-201ENST00000517006 107 ntBASIC0.04□□□□□ -2.4
LSM6P62312 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC0.04□□□□□ -2.4
LSM6P62312 MIR98-201ENST00000606724 119 ntBASIC0.04□□□□□ -2.4
LSM6P62312 RNU6-501P-201ENST00000364072 100 ntBASIC0.03□□□□□ -2.4
LSM6P62312 RNU6-1105P-201ENST00000384774 107 ntBASIC0.03□□□□□ -2.4
LSM6P62312 SNORD111-201ENST00000408139 94 ntBASIC0.03□□□□□ -2.4
LSM6P62312 AL663109.1-201ENST00000411498 844 ntBASIC0.03□□□□□ -2.4
LSM6P62312 MTCO2P3-201ENST00000442543 421 ntBASIC0.03□□□□□ -2.4
LSM6P62312 AC079781.2-201ENST00000446424 169 ntBASIC0.03□□□□□ -2.4
LSM6P62312 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC0.03□□□□□ -2.4
LSM6P62312 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.03□□□□□ -2.4
LSM6P62312 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC0.03□□□□□ -2.4
LSM6P62312 AC009159.2-201ENST00000617603 606 ntBASIC0.03□□□□□ -2.4
LSM6P62312 RNU4-45P-201ENST00000365469 141 ntBASIC0.02□□□□□ -2.41
LSM6P62312 SNORA67.2-201ENST00000384300 149 ntBASIC0.02□□□□□ -2.41
LSM6P62312 RNA5SP219-201ENST00000390940 113 ntBASIC0.02□□□□□ -2.41
LSM6P62312 MTCO2P34-201ENST00000421994 607 ntBASIC0.02□□□□□ -2.41
LSM6P62312 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC0.02□□□□□ -2.41
LSM6P62312 USP9YP25-201ENST00000457708 443 ntBASIC0.02□□□□□ -2.41
LSM6P62312 RNU7-182P-201ENST00000459009 62 ntBASIC0.02□□□□□ -2.41
LSM6P62312 snoU13.18-201ENST00000459483 104 ntBASIC0.02□□□□□ -2.41
LSM6P62312 AC002044.1-201ENST00000606707 158 ntBASIC0.02□□□□□ -2.41
LSM6P62312 RNU6-266P-201ENST00000364225 107 ntBASIC0.01□□□□□ -2.41
LSM6P62312 Y_RNA.796-201ENST00000364268 102 ntBASIC0.01□□□□□ -2.41
LSM6P62312 Y_RNA.799-201ENST00000364992 102 ntBASIC0.01□□□□□ -2.41
LSM6P62312 RNU6-169P-201ENST00000365336 107 ntBASIC0.01□□□□□ -2.41
LSM6P62312 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.01□□□□□ -2.41
LSM6P62312 Y_RNA.476-201ENST00000384347 108 ntBASIC0.01□□□□□ -2.41
LSM6P62312 CALM2P3-201ENST00000400429 449 ntBASIC0.01□□□□□ -2.41
LSM6P62312 AC004866.1-201ENST00000411748 78 ntBASIC0.01□□□□□ -2.41
LSM6P62312 AC084290.1-201ENST00000434995 374 ntBASIC0.01□□□□□ -2.41
LSM6P62312 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC0.01□□□□□ -2.41
LSM6P62312 AC093850.1-201ENST00000454121 251 ntBASIC0.01□□□□□ -2.41
LSM6P62312 snoU13.25-201ENST00000458945 104 ntBASIC0.01□□□□□ -2.41
LSM6P62312 RNU2-69P-201ENST00000516061 100 ntBASIC0.01□□□□□ -2.41
LSM6P62312 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC0.01□□□□□ -2.41
LSM6P62312 AC023932.2-201ENST00000603176 175 ntBASIC0.01□□□□□ -2.41
LSM6P62312 AC069431.2-201ENST00000604149 1099 ntBASIC0.01□□□□□ -2.41
LSM6P62312 AC100812.1-201ENST00000607622 580 ntBASIC0.01□□□□□ -2.41
LSM6P62312 AL139418.1-201ENST00000613613 177 ntBASIC0.01□□□□□ -2.41
LSM6P62312 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.01□□□□□ -2.41
LSM6P62312 SEPT14P19-203ENST00000633205 211 ntBASIC0.01□□□□□ -2.41
LSM6P62312 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.01□□□□□ -2.41
LSM6P62312 RNU6-227P-201ENST00000362865 103 ntBASIC0□□□□□ -2.41
LSM6P62312 RNU5B-2P-201ENST00000363036 113 ntBASIC0□□□□□ -2.41
LSM6P62312 RNY1-201ENST00000364228 113 ntBASIC0□□□□□ -2.41
LSM6P62312 Y_RNA.367-201ENST00000365544 101 ntBASIC0□□□□□ -2.41
LSM6P62312 MIR454-201ENST00000390180 115 ntBASIC0□□□□□ -2.41
LSM6P62312 MIR1827-201ENST00000408549 66 ntBASIC0□□□□□ -2.41
LSM6P62312 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC0□□□□□ -2.41
LSM6P62312 RPL31P35-201ENST00000431058 377 ntBASIC0□□□□□ -2.41
LSM6P62312 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC0□□□□□ -2.41
LSM6P62312 RNU6-430P-201ENST00000517078 107 ntBASIC0□□□□□ -2.41
LSM6P62312 AC005771.1-201ENST00000585581 349 ntBASIC0□□□□□ -2.41
LSM6P62312 AC008133.2-201ENST00000624540 351 ntBASIC0□□□□□ -2.41
LSM6P62312 AL138960.2-201ENST00000625145 535 ntBASIC0□□□□□ -2.41
LSM6P62312 MIR6079-201ENST00000635807 62 ntBASIC0□□□□□ -2.41
LSM6P62312 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC-0.01□□□□□ -2.41
LSM6P62312 RNU5F-6P-201ENST00000362979 116 ntBASIC-0.01□□□□□ -2.41
LSM6P62312 RNU6-1097P-201ENST00000363586 107 ntBASIC-0.01□□□□□ -2.41
LSM6P62312 SNORD70.1-201ENST00000391007 85 ntBASIC-0.01□□□□□ -2.41
LSM6P62312 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC-0.01□□□□□ -2.41
LSM6P62312 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC-0.01□□□□□ -2.41
LSM6P62312 AC092989.1-201ENST00000481235 277 ntBASIC-0.01□□□□□ -2.41
LSM6P62312 RNU2-56P-201ENST00000516826 190 ntBASIC-0.01□□□□□ -2.41
LSM6P62312 AP003716.2-201ENST00000528260 108 ntBASIC-0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms