Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC-0.25□□□□□ -2.45
LSM3P62310 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC-0.25□□□□□ -2.45
LSM3P62310 AC027288.2-201ENST00000553028 243 ntBASIC-0.25□□□□□ -2.45
LSM3P62310 MIR4769-201ENST00000584126 77 ntBASIC-0.25□□□□□ -2.45
LSM3P62310 AP000907.4-201ENST00000604143 237 ntBASIC-0.25□□□□□ -2.45
LSM3P62310 AL078596.1-201ENST00000624856 447 ntBASIC-0.25□□□□□ -2.45
LSM3P62310 AL359697.1-201ENST00000624879 587 ntBASIC-0.25□□□□□ -2.45
LSM3P62310 SNORD113.3-201ENST00000364630 78 ntBASIC-0.26□□□□□ -2.45
LSM3P62310 SNORD115-7-201ENST00000365306 82 ntBASIC-0.26□□□□□ -2.45
LSM3P62310 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC-0.26□□□□□ -2.45
LSM3P62310 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC-0.26□□□□□ -2.45
LSM3P62310 SEPT7P4-201ENST00000437076 306 ntBASIC-0.26□□□□□ -2.45
LSM3P62310 MTCO2P6-201ENST00000463134 685 ntBASIC-0.26□□□□□ -2.45
LSM3P62310 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC-0.26□□□□□ -2.45
LSM3P62310 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC-0.26□□□□□ -2.45
LSM3P62310 AC104136.1-201ENST00000512969 394 ntBASIC-0.26□□□□□ -2.45
LSM3P62310 AC026470.2-201ENST00000561492 181 ntBASIC-0.26□□□□□ -2.45
LSM3P62310 Six3os1_7.1-201ENST00000621512 201 ntBASIC-0.26□□□□□ -2.45
LSM3P62310 RNU6-179P-201ENST00000363350 107 ntBASIC-0.27□□□□□ -2.45
LSM3P62310 RNU6-1097P-201ENST00000363586 107 ntBASIC-0.27□□□□□ -2.45
LSM3P62310 SNORA2B-201ENST00000384583 137 ntBASIC-0.27□□□□□ -2.45
LSM3P62310 MTND1P20-201ENST00000430341 950 ntBASIC-0.27□□□□□ -2.45
LSM3P62310 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC-0.27□□□□□ -2.45
LSM3P62310 AC119618.1-201ENST00000434191 222 ntBASIC-0.27□□□□□ -2.45
LSM3P62310 ELOCP24-201ENST00000456370 334 ntBASIC-0.27□□□□□ -2.45
LSM3P62310 RPL39P5-202ENST00000512505 151 ntBASIC-0.27□□□□□ -2.45
LSM3P62310 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC-0.27□□□□□ -2.45
LSM3P62310 ZNF204P-201ENST00000416749 2397 ntBASIC-0.27□□□□□ -2.45
LSM3P62310 RNU6-550P-201ENST00000391057 101 ntBASIC-0.28□□□□□ -2.45
LSM3P62310 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC-0.28□□□□□ -2.45
LSM3P62310 MRPS10P2-201ENST00000431226 381 ntBASIC-0.28□□□□□ -2.45
LSM3P62310 RNU7-94P-201ENST00000459576 63 ntBASIC-0.28□□□□□ -2.45
LSM3P62310 RNA5SP436-201ENST00000516020 115 ntBASIC-0.28□□□□□ -2.45
LSM3P62310 RNU6-1223P-201ENST00000517124 104 ntBASIC-0.28□□□□□ -2.45
LSM3P62310 RNU6-58P-201ENST00000517143 103 ntBASIC-0.28□□□□□ -2.45
LSM3P62310 AC112693.2-201ENST00000556538 232 ntBASIC-0.28□□□□□ -2.45
LSM3P62310 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC-0.28□□□□□ -2.45
LSM3P62310 BNIP3P40-201ENST00000596017 556 ntBASIC-0.28□□□□□ -2.45
LSM3P62310 MIR6715A-201ENST00000615929 79 ntBASIC-0.28□□□□□ -2.45
LSM3P62310 AC008873.1-201ENST00000625051 138 ntBASIC-0.28□□□□□ -2.45
LSM3P62310 AC004808.1-201ENST00000627671 721 ntBASIC-0.28□□□□□ -2.45
LSM3P62310 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC-0.29□□□□□ -2.46
LSM3P62310 ELOCP4-201ENST00000420090 333 ntBASIC-0.29□□□□□ -2.46
LSM3P62310 AC015818.7-201ENST00000428754 109 ntBASIC-0.29□□□□□ -2.46
LSM3P62310 MTND3P1-201ENST00000441336 220 ntBASIC-0.29□□□□□ -2.46
LSM3P62310 AC087499.7-201ENST00000441958 109 ntBASIC-0.29□□□□□ -2.46
LSM3P62310 EXOSC3P1-201ENST00000448649 500 ntBASIC-0.29□□□□□ -2.46
LSM3P62310 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC-0.29□□□□□ -2.46
LSM3P62310 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC-0.29□□□□□ -2.46
LSM3P62310 AC023442.1-201ENST00000531247 422 ntBASIC-0.29□□□□□ -2.46
LSM3P62310 MIR548AO-201ENST00000579992 96 ntBASIC-0.29□□□□□ -2.46
LSM3P62310 AC002044.1-201ENST00000606707 158 ntBASIC-0.29□□□□□ -2.46
LSM3P62310 Y_RNA.100-201ENST00000363141 102 ntBASIC-0.3□□□□□ -2.46
LSM3P62310 SNORD118-201ENST00000363593 134 ntBASIC-0.3□□□□□ -2.46
LSM3P62310 MIR487A-201ENST00000385009 80 ntBASIC-0.3□□□□□ -2.46
LSM3P62310 MIR1302-7-201ENST00000408841 72 ntBASIC-0.3□□□□□ -2.46
LSM3P62310 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC-0.3□□□□□ -2.46
LSM3P62310 AL139396.1-201ENST00000421137 167 ntBASIC-0.3□□□□□ -2.46
LSM3P62310 AL596276.1-201ENST00000434465 418 ntBASIC-0.3□□□□□ -2.46
LSM3P62310 EEF1A1P39-201ENST00000440791 250 ntBASIC-0.3□□□□□ -2.46
LSM3P62310 BTBD7P2-201ENST00000441962 620 ntBASIC-0.3□□□□□ -2.46
LSM3P62310 snoU13.21-201ENST00000459368 105 ntBASIC-0.3□□□□□ -2.46
LSM3P62310 RNA5SP94-201ENST00000516917 108 ntBASIC-0.3□□□□□ -2.46
LSM3P62310 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC-0.3□□□□□ -2.46
LSM3P62310 AC104695.3-201ENST00000604052 296 ntBASIC-0.3□□□□□ -2.46
LSM3P62310 AC112187.2-201ENST00000604345 283 ntBASIC-0.3□□□□□ -2.46
LSM3P62310 AC112191.3-201ENST00000604371 277 ntBASIC-0.3□□□□□ -2.46
LSM3P62310 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC-0.31□□□□□ -2.46
LSM3P62310 SNORA1B-201ENST00000362535 133 ntBASIC-0.31□□□□□ -2.46
LSM3P62310 MTCO2P23-201ENST00000425216 680 ntBASIC-0.31□□□□□ -2.46
LSM3P62310 AC137499.1-201ENST00000427602 88 ntBASIC-0.31□□□□□ -2.46
LSM3P62310 HSPE1P23-201ENST00000509838 286 ntBASIC-0.31□□□□□ -2.46
LSM3P62310 RNU2-56P-201ENST00000516826 190 ntBASIC-0.31□□□□□ -2.46
LSM3P62310 SNORA25.17-201ENST00000517184 124 ntBASIC-0.31□□□□□ -2.46
LSM3P62310 AP001372.4-201ENST00000524889 472 ntBASIC-0.31□□□□□ -2.46
LSM3P62310 AC104383.1-201ENST00000530297 370 ntBASIC-0.31□□□□□ -2.46
LSM3P62310 AC023157.2-201ENST00000540596 141 ntBASIC-0.31□□□□□ -2.46
LSM3P62310 NDUFAF4P1-201ENST00000559425 519 ntBASIC-0.31□□□□□ -2.46
LSM3P62310 MIR4438-201ENST00000585271 93 ntBASIC-0.31□□□□□ -2.46
LSM3P62310 AL592221.1-201ENST00000605266 382 ntBASIC-0.31□□□□□ -2.46
LSM3P62310 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC-0.31□□□□□ -2.46
LSM3P62310 AC139792.3-201ENST00000623525 224 ntBASIC-0.31□□□□□ -2.46
LSM3P62310 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC-0.32□□□□□ -2.46
LSM3P62310 SNORA32.1-201ENST00000364514 115 ntBASIC-0.32□□□□□ -2.46
LSM3P62310 RNU6-387P-201ENST00000411331 105 ntBASIC-0.32□□□□□ -2.46
LSM3P62310 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC-0.32□□□□□ -2.46
LSM3P62310 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC-0.32□□□□□ -2.46
LSM3P62310 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC-0.32□□□□□ -2.46
LSM3P62310 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC-0.32□□□□□ -2.46
LSM3P62310 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC-0.32□□□□□ -2.46
LSM3P62310 AC116562.3-201ENST00000506136 177 ntBASIC-0.32□□□□□ -2.46
LSM3P62310 SCARNA24.1-201ENST00000516465 137 ntBASIC-0.32□□□□□ -2.46
LSM3P62310 AC068587.5-201ENST00000528506 175 ntBASIC-0.32□□□□□ -2.46
LSM3P62310 AC012433.1-201ENST00000588916 398 ntBASIC-0.32□□□□□ -2.46
LSM3P62310 RBM11P1-201ENST00000604951 799 ntBASIC-0.32□□□□□ -2.46
LSM3P62310 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC-0.33□□□□□ -2.46
LSM3P62310 RNU5B-2P-201ENST00000363036 113 ntBASIC-0.33□□□□□ -2.46
LSM3P62310 Y_RNA.267-201ENST00000364679 109 ntBASIC-0.33□□□□□ -2.46
LSM3P62310 MIR520C-201ENST00000385005 87 ntBASIC-0.33□□□□□ -2.46
LSM3P62310 RNU6-700P-201ENST00000391043 107 ntBASIC-0.33□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms