Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 RNA5SP118-201ENST00000410385 109 ntBASIC1.49□□□□□ -2.17
SRP54P61011 RNU6-174P-201ENST00000410406 106 ntBASIC1.49□□□□□ -2.17
SRP54P61011 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.49□□□□□ -2.17
SRP54P61011 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.49□□□□□ -2.17
SRP54P61011 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.49□□□□□ -2.17
SRP54P61011 HSPE1P24-201ENST00000450782 238 ntBASIC1.49□□□□□ -2.17
SRP54P61011 AL163540.1-201ENST00000485382 386 ntBASIC1.49□□□□□ -2.17
SRP54P61011 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.49□□□□□ -2.17
SRP54P61011 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.49□□□□□ -2.17
SRP54P61011 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.49□□□□□ -2.17
SRP54P61011 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.49□□□□□ -2.17
SRP54P61011 AL160236.1-201ENST00000556317 195 ntBASIC1.49□□□□□ -2.17
SRP54P61011 TPRKBP2-201ENST00000565969 475 ntBASIC1.49□□□□□ -2.17
SRP54P61011 AC012557.2-201ENST00000605919 418 ntBASIC1.49□□□□□ -2.17
SRP54P61011 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.49□□□□□ -2.17
SRP54P61011 snoZ196.1-201ENST00000625269 89 ntBASIC1.49□□□□□ -2.17
SRP54P61011 MIR302D-201ENST00000362275 68 ntBASIC1.48□□□□□ -2.17
SRP54P61011 RNU1-62P-201ENST00000362599 164 ntBASIC1.48□□□□□ -2.17
SRP54P61011 Y_RNA.319-201ENST00000365138 92 ntBASIC1.48□□□□□ -2.17
SRP54P61011 SNORD116-11-201ENST00000383882 92 ntBASIC1.48□□□□□ -2.17
SRP54P61011 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.48□□□□□ -2.17
SRP54P61011 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
SRP54P61011 RNU6-57P-201ENST00000411348 103 ntBASIC1.48□□□□□ -2.17
SRP54P61011 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.48□□□□□ -2.17
SRP54P61011 AC009161.1-201ENST00000417306 376 ntBASIC1.48□□□□□ -2.17
SRP54P61011 AC008134.1-201ENST00000420943 193 ntBASIC1.48□□□□□ -2.17
SRP54P61011 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.48□□□□□ -2.17
SRP54P61011 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.48□□□□□ -2.17
SRP54P61011 snoU13.27-201ENST00000459278 104 ntBASIC1.48□□□□□ -2.17
SRP54P61011 RNA5SP445-201ENST00000515889 115 ntBASIC1.48□□□□□ -2.17
SRP54P61011 RNU6-58P-201ENST00000517143 103 ntBASIC1.48□□□□□ -2.17
SRP54P61011 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.48□□□□□ -2.17
SRP54P61011 AC024995.1-201ENST00000523014 93 ntBASIC1.48□□□□□ -2.17
SRP54P61011 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.48□□□□□ -2.17
SRP54P61011 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.48□□□□□ -2.17
SRP54P61011 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.48□□□□□ -2.17
SRP54P61011 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.48□□□□□ -2.17
SRP54P61011 U4.5-201ENST00000617137 123 ntBASIC1.48□□□□□ -2.17
SRP54P61011 AC006001.4-201ENST00000622243 395 ntBASIC1.48□□□□□ -2.17
SRP54P61011 AC090617.10-201ENST00000624308 134 ntBASIC1.48□□□□□ -2.17
SRP54P61011 ICE2P2-201ENST00000483823 2787 ntBASIC1.48□□□□□ -2.17
SRP54P61011 AC100821.1-201ENST00000523153 2479 ntBASIC1.48□□□□□ -2.17
SRP54P61011 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.48□□□□□ -2.17
SRP54P61011 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.48□□□□□ -2.17
SRP54P61011 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
SRP54P61011 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
SRP54P61011 Y_RNA.157-201ENST00000363638 102 ntBASIC1.47□□□□□ -2.17
SRP54P61011 RNU6-271P-201ENST00000363858 105 ntBASIC1.47□□□□□ -2.17
SRP54P61011 Y_RNA.450-201ENST00000384198 113 ntBASIC1.47□□□□□ -2.17
SRP54P61011 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
SRP54P61011 MIR1304-201ENST00000408243 91 ntBASIC1.47□□□□□ -2.17
SRP54P61011 AL161935.2-201ENST00000414627 60 ntBASIC1.47□□□□□ -2.17
SRP54P61011 Z82188.1-201ENST00000436709 154 ntBASIC1.47□□□□□ -2.17
SRP54P61011 AC009474.2-201ENST00000451383 136 ntBASIC1.47□□□□□ -2.17
SRP54P61011 FO393415.2-201ENST00000480085 343 ntBASIC1.47□□□□□ -2.17
SRP54P61011 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.47□□□□□ -2.17
SRP54P61011 RNU6-864P-201ENST00000516256 108 ntBASIC1.47□□□□□ -2.17
SRP54P61011 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.47□□□□□ -2.17
SRP54P61011 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.47□□□□□ -2.17
SRP54P61011 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.47□□□□□ -2.17
SRP54P61011 uc_338.5-201ENST00000611839 155 ntBASIC1.47□□□□□ -2.17
SRP54P61011 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.47□□□□□ -2.17
SRP54P61011 AL161722.3-201ENST00000605789 2983 ntBASIC1.47□□□□□ -2.17
SRP54P61011 ZNF209P-201ENST00000593450 2304 ntBASIC1.46□□□□□ -2.18
SRP54P61011 SNORD33-201ENST00000362761 85 ntBASIC1.46□□□□□ -2.18
SRP54P61011 Y_RNA.89-201ENST00000363031 102 ntBASIC1.46□□□□□ -2.18
SRP54P61011 RNU5F-3P-201ENST00000363767 117 ntBASIC1.46□□□□□ -2.18
SRP54P61011 RNU4-13P-201ENST00000364019 141 ntBASIC1.46□□□□□ -2.18
SRP54P61011 RNU6-534P-201ENST00000364877 106 ntBASIC1.46□□□□□ -2.18
SRP54P61011 MIR1253-201ENST00000408273 105 ntBASIC1.46□□□□□ -2.18
SRP54P61011 RNU6-955P-201ENST00000410497 104 ntBASIC1.46□□□□□ -2.18
SRP54P61011 RNA5SP504-201ENST00000410676 117 ntBASIC1.46□□□□□ -2.18
SRP54P61011 AL354695.1-201ENST00000427935 228 ntBASIC1.46□□□□□ -2.18
SRP54P61011 NDUFB4P10-201ENST00000452541 359 ntBASIC1.46□□□□□ -2.18
SRP54P61011 RNU6-221P-201ENST00000459541 99 ntBASIC1.46□□□□□ -2.18
SRP54P61011 RPS26P55-201ENST00000471178 356 ntBASIC1.46□□□□□ -2.18
SRP54P61011 RNU1-92P-201ENST00000517017 135 ntBASIC1.46□□□□□ -2.18
SRP54P61011 RNU1-117P-201ENST00000517041 158 ntBASIC1.46□□□□□ -2.18
SRP54P61011 RNU6-1314P-201ENST00000517139 104 ntBASIC1.46□□□□□ -2.18
SRP54P61011 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.46□□□□□ -2.18
SRP54P61011 AC027288.2-201ENST00000553028 243 ntBASIC1.46□□□□□ -2.18
SRP54P61011 AL161670.1-201ENST00000554348 137 ntBASIC1.46□□□□□ -2.18
SRP54P61011 MIR5696-201ENST00000578474 85 ntBASIC1.46□□□□□ -2.18
SRP54P61011 AP003465.2-201ENST00000602571 373 ntBASIC1.46□□□□□ -2.18
SRP54P61011 7SK.7-201ENST00000603504 247 ntBASIC1.46□□□□□ -2.18
SRP54P61011 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
SRP54P61011 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.46□□□□□ -2.18
SRP54P61011 AP000648.3-201ENST00000623539 4507 ntBASIC1.46□□□□□ -2.18
SRP54P61011 Y_RNA.4-201ENST00000362333 112 ntBASIC1.45□□□□□ -2.18
SRP54P61011 Y_RNA.164-201ENST00000363709 102 ntBASIC1.45□□□□□ -2.18
SRP54P61011 RNU6-596P-201ENST00000365395 98 ntBASIC1.45□□□□□ -2.18
SRP54P61011 Y_RNA.554-201ENST00000384672 102 ntBASIC1.45□□□□□ -2.18
SRP54P61011 AC016909.1-201ENST00000415916 166 ntBASIC1.45□□□□□ -2.18
SRP54P61011 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.45□□□□□ -2.18
SRP54P61011 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.45□□□□□ -2.18
SRP54P61011 AC023790.1-201ENST00000482174 347 ntBASIC1.45□□□□□ -2.18
SRP54P61011 MTCYBP18-201ENST00000501056 747 ntBASIC1.45□□□□□ -2.18
SRP54P61011 RNU6-902P-201ENST00000517212 91 ntBASIC1.45□□□□□ -2.18
SRP54P61011 AC025647.1-201ENST00000517879 253 ntBASIC1.45□□□□□ -2.18
SRP54P61011 MIR3942-201ENST00000585264 109 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 124.8 ms