Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 MIR3941-201ENST00000582572 103 ntBASIC0.16□□□□□ -2.38
SPCS3P61009 MIR4452-201ENST00000583004 71 ntBASIC0.16□□□□□ -2.38
SPCS3P61009 MIR4509-2-201ENST00000583920 94 ntBASIC0.16□□□□□ -2.38
SPCS3P61009 BNIP3P39-201ENST00000601077 554 ntBASIC0.16□□□□□ -2.38
SPCS3P61009 AL136317.1-201ENST00000612653 226 ntBASIC0.16□□□□□ -2.38
SPCS3P61009 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.16□□□□□ -2.38
SPCS3P61009 SEPT14P17-201ENST00000617978 177 ntBASIC0.16□□□□□ -2.38
SPCS3P61009 MIR4509-1-201ENST00000618224 94 ntBASIC0.16□□□□□ -2.38
SPCS3P61009 AC139792.3-201ENST00000623525 224 ntBASIC0.16□□□□□ -2.38
SPCS3P61009 AC100810.6-201ENST00000638068 285 ntBASIC0.16□□□□□ -2.38
SPCS3P61009 RNU6-349P-201ENST00000362402 107 ntBASIC0.15□□□□□ -2.39
SPCS3P61009 RNU6-227P-201ENST00000362865 103 ntBASIC0.15□□□□□ -2.39
SPCS3P61009 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC0.15□□□□□ -2.39
SPCS3P61009 AC004854.1-201ENST00000440356 349 ntBASIC0.15□□□□□ -2.39
SPCS3P61009 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC0.15□□□□□ -2.39
SPCS3P61009 RNU6-612P-201ENST00000516909 102 ntBASIC0.15□□□□□ -2.39
SPCS3P61009 MIR3192-201ENST00000584920 77 ntBASIC0.15□□□□□ -2.39
SPCS3P61009 RNU6-85P-201ENST00000605989 107 ntBASIC0.15□□□□□ -2.39
SPCS3P61009 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.15□□□□□ -2.39
SPCS3P61009 RNU6-1327P-201ENST00000365302 105 ntBASIC0.14□□□□□ -2.39
SPCS3P61009 RNU6-342P-201ENST00000384521 104 ntBASIC0.14□□□□□ -2.39
SPCS3P61009 AL663109.1-201ENST00000411498 844 ntBASIC0.14□□□□□ -2.39
SPCS3P61009 MRPS18CP6-201ENST00000423587 223 ntBASIC0.14□□□□□ -2.39
SPCS3P61009 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC0.14□□□□□ -2.39
SPCS3P61009 GPR143P-201ENST00000434155 205 ntBASIC0.14□□□□□ -2.39
SPCS3P61009 AC093019.1-201ENST00000443135 252 ntBASIC0.14□□□□□ -2.39
SPCS3P61009 RPS29P27-201ENST00000463711 170 ntBASIC0.14□□□□□ -2.39
SPCS3P61009 RNA5SP454-201ENST00000517231 127 ntBASIC0.14□□□□□ -2.39
SPCS3P61009 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC0.14□□□□□ -2.39
SPCS3P61009 MIR4703-201ENST00000577728 79 ntBASIC0.14□□□□□ -2.39
SPCS3P61009 AC017083.3-201ENST00000609955 700 ntBASIC0.14□□□□□ -2.39
SPCS3P61009 AC007014.2-201ENST00000615581 479 ntBASIC0.14□□□□□ -2.39
SPCS3P61009 AC107308.1-201ENST00000615897 301 ntBASIC0.14□□□□□ -2.39
SPCS3P61009 MIR8070-201ENST00000616510 88 ntBASIC0.14□□□□□ -2.39
SPCS3P61009 MTND4P9-201ENST00000507819 1346 ntBASIC0.13□□□□□ -2.39
SPCS3P61009 RNU6-1286P-201ENST00000383871 107 ntBASIC0.13□□□□□ -2.39
SPCS3P61009 Y_RNA.399-201ENST00000383955 105 ntBASIC0.13□□□□□ -2.39
SPCS3P61009 RNY1P8-201ENST00000383970 114 ntBASIC0.13□□□□□ -2.39
SPCS3P61009 RNU6-793P-201ENST00000384233 104 ntBASIC0.13□□□□□ -2.39
SPCS3P61009 RNU6-1106P-201ENST00000390845 107 ntBASIC0.13□□□□□ -2.39
SPCS3P61009 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.13□□□□□ -2.39
SPCS3P61009 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.13□□□□□ -2.39
SPCS3P61009 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.13□□□□□ -2.39
SPCS3P61009 RPS29P15-201ENST00000458329 171 ntBASIC0.13□□□□□ -2.39
SPCS3P61009 SCARNA18-201ENST00000459004 134 ntBASIC0.13□□□□□ -2.39
SPCS3P61009 RPL39P5-202ENST00000512505 151 ntBASIC0.13□□□□□ -2.39
SPCS3P61009 RNU7-12P-201ENST00000516030 62 ntBASIC0.13□□□□□ -2.39
SPCS3P61009 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC0.13□□□□□ -2.39
SPCS3P61009 AP003716.2-201ENST00000528260 108 ntBASIC0.13□□□□□ -2.39
SPCS3P61009 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC0.13□□□□□ -2.39
SPCS3P61009 MIR4711-201ENST00000578274 70 ntBASIC0.13□□□□□ -2.39
SPCS3P61009 AL117336.2-201ENST00000602435 335 ntBASIC0.13□□□□□ -2.39
SPCS3P61009 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.13□□□□□ -2.39
SPCS3P61009 SCARNA4-201ENST00000629045 128 ntBASIC0.13□□□□□ -2.39
SPCS3P61009 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.13□□□□□ -2.39
SPCS3P61009 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC0.12□□□□□ -2.39
SPCS3P61009 Y_RNA.265-201ENST00000364677 108 ntBASIC0.12□□□□□ -2.39
SPCS3P61009 RNU1-133P-201ENST00000364867 167 ntBASIC0.12□□□□□ -2.39
SPCS3P61009 MIR140-201ENST00000385282 100 ntBASIC0.12□□□□□ -2.39
SPCS3P61009 MIR320B2-201ENST00000408479 138 ntBASIC0.12□□□□□ -2.39
SPCS3P61009 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC0.12□□□□□ -2.39
SPCS3P61009 USP9YP29-201ENST00000445112 563 ntBASIC0.12□□□□□ -2.39
SPCS3P61009 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC0.12□□□□□ -2.39
SPCS3P61009 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.12□□□□□ -2.39
SPCS3P61009 GMFBP1-201ENST00000467831 427 ntBASIC0.12□□□□□ -2.39
SPCS3P61009 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC0.12□□□□□ -2.39
SPCS3P61009 RNU1-117P-201ENST00000517041 158 ntBASIC0.12□□□□□ -2.39
SPCS3P61009 MTND2P32-201ENST00000521584 1038 ntBASIC0.12□□□□□ -2.39
SPCS3P61009 MTND4P33-201ENST00000556706 766 ntBASIC0.12□□□□□ -2.39
SPCS3P61009 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.12□□□□□ -2.39
SPCS3P61009 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.12□□□□□ -2.39
SPCS3P61009 MTND4P4-201ENST00000439033 1366 ntBASIC0.11□□□□□ -2.39
SPCS3P61009 MIR103A2-201ENST00000362154 78 ntBASIC0.11□□□□□ -2.39
SPCS3P61009 RNU6-500P-201ENST00000362349 107 ntBASIC0.11□□□□□ -2.39
SPCS3P61009 SNORA25.9-201ENST00000365087 128 ntBASIC0.11□□□□□ -2.39
SPCS3P61009 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.11□□□□□ -2.39
SPCS3P61009 RNA5SP247-201ENST00000411181 105 ntBASIC0.11□□□□□ -2.39
SPCS3P61009 AC067940.1-201ENST00000458411 300 ntBASIC0.11□□□□□ -2.39
SPCS3P61009 RNU7-28P-201ENST00000516759 62 ntBASIC0.11□□□□□ -2.39
SPCS3P61009 RNU6-430P-201ENST00000517078 107 ntBASIC0.11□□□□□ -2.39
SPCS3P61009 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.11□□□□□ -2.39
SPCS3P61009 FRG2DP-202ENST00000566967 323 ntBASIC0.11□□□□□ -2.39
SPCS3P61009 AL158050.2-201ENST00000605336 568 ntBASIC0.11□□□□□ -2.39
SPCS3P61009 AC122133.1-201ENST00000613964 233 ntBASIC0.11□□□□□ -2.39
SPCS3P61009 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.11□□□□□ -2.39
SPCS3P61009 AL390237.1-201ENST00000404226 1415 ntBASIC0.11□□□□□ -2.39
SPCS3P61009 RNU6-1097P-201ENST00000363586 107 ntBASIC0.1□□□□□ -2.39
SPCS3P61009 RNU6-108P-201ENST00000365558 107 ntBASIC0.1□□□□□ -2.39
SPCS3P61009 MIR1185-2-201ENST00000408687 86 ntBASIC0.1□□□□□ -2.39
SPCS3P61009 RNU6-177P-201ENST00000411257 104 ntBASIC0.1□□□□□ -2.39
SPCS3P61009 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC0.1□□□□□ -2.39
SPCS3P61009 MTATP6P14-201ENST00000455189 673 ntBASIC0.1□□□□□ -2.39
SPCS3P61009 RNU7-167P-201ENST00000459160 62 ntBASIC0.1□□□□□ -2.39
SPCS3P61009 AP000870.1-201ENST00000472927 406 ntBASIC0.1□□□□□ -2.39
SPCS3P61009 RNU6-1223P-201ENST00000517124 104 ntBASIC0.1□□□□□ -2.39
SPCS3P61009 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.1□□□□□ -2.39
SPCS3P61009 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.1□□□□□ -2.39
SPCS3P61009 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.1□□□□□ -2.39
SPCS3P61009 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.09□□□□□ -2.4
SPCS3P61009 RNU5F-7P-201ENST00000363696 115 ntBASIC0.09□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms