Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 AL590095.2-201ENST00000604136 117 ntBASIC0.55□□□□□ -2.32
ACTBP60709 AC097065.2-201ENST00000608159 533 ntBASIC0.55□□□□□ -2.32
ACTBP60709 AC022709.1-201ENST00000615967 87 ntBASIC0.55□□□□□ -2.32
ACTBP60709 AC073349.3-201ENST00000617616 186 ntBASIC0.55□□□□□ -2.32
ACTBP60709 AC079248.2-201ENST00000623779 326 ntBASIC0.55□□□□□ -2.32
ACTBP60709 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.55□□□□□ -2.32
ACTBP60709 RNU4-76P-201ENST00000364509 141 ntBASIC0.54□□□□□ -2.32
ACTBP60709 RNU6-1240P-201ENST00000365155 104 ntBASIC0.54□□□□□ -2.32
ACTBP60709 SNORA80D-201ENST00000384488 135 ntBASIC0.54□□□□□ -2.32
ACTBP60709 MIR508-201ENST00000384857 115 ntBASIC0.54□□□□□ -2.32
ACTBP60709 MIR92A1-201ENST00000385233 78 ntBASIC0.54□□□□□ -2.32
ACTBP60709 RNU6-1106P-201ENST00000390845 107 ntBASIC0.54□□□□□ -2.32
ACTBP60709 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.54□□□□□ -2.32
ACTBP60709 MRPL42P3-201ENST00000401492 326 ntBASIC0.54□□□□□ -2.32
ACTBP60709 RNA5SP504-201ENST00000410676 117 ntBASIC0.54□□□□□ -2.32
ACTBP60709 MTATP6P19-201ENST00000413797 659 ntBASIC0.54□□□□□ -2.32
ACTBP60709 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.54□□□□□ -2.32
ACTBP60709 AC245047.3-201ENST00000429428 127 ntBASIC0.54□□□□□ -2.32
ACTBP60709 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC0.54□□□□□ -2.32
ACTBP60709 AC005002.2-201ENST00000438228 269 ntBASIC0.54□□□□□ -2.32
ACTBP60709 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC0.54□□□□□ -2.32
ACTBP60709 OFD1P4Y-201ENST00000455273 1179 ntBASIC0.54□□□□□ -2.32
ACTBP60709 AF186996.7-201ENST00000492781 209 ntBASIC0.54□□□□□ -2.32
ACTBP60709 SNORA18.6-201ENST00000516792 115 ntBASIC0.54□□□□□ -2.32
ACTBP60709 DEFB108E-201ENST00000524692 240 ntBASIC0.54□□□□□ -2.32
ACTBP60709 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.54□□□□□ -2.32
ACTBP60709 AC009094.1-201ENST00000564443 426 ntBASIC0.54□□□□□ -2.32
ACTBP60709 AC080078.2-201ENST00000603766 501 ntBASIC0.54□□□□□ -2.32
ACTBP60709 SNRPGP20-201ENST00000604477 205 ntBASIC0.54□□□□□ -2.32
ACTBP60709 AC104465.1-201ENST00000611365 139 ntBASIC0.54□□□□□ -2.32
ACTBP60709 uc_338.17-201ENST00000619633 179 ntBASIC0.54□□□□□ -2.32
ACTBP60709 SCARNA4-201ENST00000629045 128 ntBASIC0.54□□□□□ -2.32
ACTBP60709 RNU4-21P-201ENST00000362802 126 ntBASIC0.53□□□□□ -2.32
ACTBP60709 RNU6-553P-201ENST00000364047 96 ntBASIC0.53□□□□□ -2.32
ACTBP60709 RNU6-517P-201ENST00000384362 110 ntBASIC0.53□□□□□ -2.32
ACTBP60709 Y_RNA.560-201ENST00000384689 102 ntBASIC0.53□□□□□ -2.32
ACTBP60709 AL034345.1-201ENST00000407768 123 ntBASIC0.53□□□□□ -2.32
ACTBP60709 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.53□□□□□ -2.32
ACTBP60709 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.53□□□□□ -2.32
ACTBP60709 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC0.53□□□□□ -2.32
ACTBP60709 MTND4P32-201ENST00000437189 1237 ntBASIC0.53□□□□□ -2.32
ACTBP60709 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.53□□□□□ -2.32
ACTBP60709 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC0.53□□□□□ -2.32
ACTBP60709 RNA5SP255-201ENST00000516370 107 ntBASIC0.53□□□□□ -2.32
ACTBP60709 AC090049.2-201ENST00000550377 109 ntBASIC0.53□□□□□ -2.32
ACTBP60709 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.53□□□□□ -2.32
ACTBP60709 HIF1AP1-201ENST00000553642 175 ntBASIC0.53□□□□□ -2.32
ACTBP60709 MIR4714-201ENST00000580728 77 ntBASIC0.53□□□□□ -2.32
ACTBP60709 FGF7P1-201ENST00000582820 288 ntBASIC0.53□□□□□ -2.32
ACTBP60709 AL162424.1-201ENST00000602325 221 ntBASIC0.53□□□□□ -2.32
ACTBP60709 AC016597.2-201ENST00000613256 341 ntBASIC0.53□□□□□ -2.32
ACTBP60709 AC106754.2-201ENST00000623006 233 ntBASIC0.53□□□□□ -2.32
ACTBP60709 AL078596.1-201ENST00000624856 447 ntBASIC0.53□□□□□ -2.32
ACTBP60709 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.53□□□□□ -2.32
ACTBP60709 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
ACTBP60709 MIR605-201ENST00000385078 83 ntBASIC0.52□□□□□ -2.33
ACTBP60709 MIR613-201ENST00000385248 95 ntBASIC0.52□□□□□ -2.33
ACTBP60709 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.52□□□□□ -2.33
ACTBP60709 CCDC34P1-201ENST00000507441 517 ntBASIC0.52□□□□□ -2.33
ACTBP60709 SNORA14.1-201ENST00000516113 141 ntBASIC0.52□□□□□ -2.33
ACTBP60709 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.52□□□□□ -2.33
ACTBP60709 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.52□□□□□ -2.33
ACTBP60709 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
ACTBP60709 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
ACTBP60709 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
ACTBP60709 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.51□□□□□ -2.33
ACTBP60709 RNU6-199P-201ENST00000362954 107 ntBASIC0.51□□□□□ -2.33
ACTBP60709 MIR598-201ENST00000384868 97 ntBASIC0.51□□□□□ -2.33
ACTBP60709 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC0.51□□□□□ -2.33
ACTBP60709 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
ACTBP60709 MIR942-201ENST00000401111 86 ntBASIC0.51□□□□□ -2.33
ACTBP60709 RNU2-9P-201ENST00000410194 145 ntBASIC0.51□□□□□ -2.33
ACTBP60709 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC0.51□□□□□ -2.33
ACTBP60709 BX295541.1-201ENST00000417774 250 ntBASIC0.51□□□□□ -2.33
ACTBP60709 RPS26P5-201ENST00000418544 335 ntBASIC0.51□□□□□ -2.33
ACTBP60709 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.51□□□□□ -2.33
ACTBP60709 MTND3P9-201ENST00000429526 346 ntBASIC0.51□□□□□ -2.33
ACTBP60709 RPS27P22-201ENST00000478056 241 ntBASIC0.51□□□□□ -2.33
ACTBP60709 COX6CP6-201ENST00000490840 228 ntBASIC0.51□□□□□ -2.33
ACTBP60709 RNU6-917P-201ENST00000516294 104 ntBASIC0.51□□□□□ -2.33
ACTBP60709 RNU6-430P-201ENST00000517078 107 ntBASIC0.51□□□□□ -2.33
ACTBP60709 RNU6-232P-201ENST00000517144 64 ntBASIC0.51□□□□□ -2.33
ACTBP60709 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC0.51□□□□□ -2.33
ACTBP60709 MRPS36P4-201ENST00000534436 298 ntBASIC0.51□□□□□ -2.33
ACTBP60709 APOOP3-201ENST00000536787 586 ntBASIC0.51□□□□□ -2.33
ACTBP60709 SCOCP1-201ENST00000554676 349 ntBASIC0.51□□□□□ -2.33
ACTBP60709 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.51□□□□□ -2.33
ACTBP60709 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.51□□□□□ -2.33
ACTBP60709 MIR4424-201ENST00000585257 86 ntBASIC0.51□□□□□ -2.33
ACTBP60709 AC064836.2-201ENST00000609491 462 ntBASIC0.51□□□□□ -2.33
ACTBP60709 HULC.1-201ENST00000612720 240 ntBASIC0.51□□□□□ -2.33
ACTBP60709 U6.73-201ENST00000619194 103 ntBASIC0.51□□□□□ -2.33
ACTBP60709 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.51□□□□□ -2.33
ACTBP60709 FGF7P2-201ENST00000332473 296 ntBASIC0.5□□□□□ -2.33
ACTBP60709 RNA5SP361-201ENST00000362686 118 ntBASIC0.5□□□□□ -2.33
ACTBP60709 RNU6-1120P-201ENST00000362988 108 ntBASIC0.5□□□□□ -2.33
ACTBP60709 RNU1-133P-201ENST00000364867 167 ntBASIC0.5□□□□□ -2.33
ACTBP60709 Y_RNA.354-201ENST00000365448 111 ntBASIC0.5□□□□□ -2.33
ACTBP60709 RNU5A-2P-201ENST00000384337 116 ntBASIC0.5□□□□□ -2.33
ACTBP60709 AL049545.1-201ENST00000401856 572 ntBASIC0.5□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 168.6 ms