Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 MRPL42P3-201ENST00000401492 326 ntBASIC0.81□□□□□ -2.28
CLDN18P56856 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.81□□□□□ -2.28
CLDN18P56856 AC048334.1-201ENST00000477975 159 ntBASIC0.81□□□□□ -2.28
CLDN18P56856 CCDC34P1-201ENST00000507441 517 ntBASIC0.81□□□□□ -2.28
CLDN18P56856 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC0.81□□□□□ -2.28
CLDN18P56856 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.81□□□□□ -2.28
CLDN18P56856 AC022217.4-201ENST00000604389 163 ntBASIC0.81□□□□□ -2.28
CLDN18P56856 AC211469.2-201ENST00000605461 205 ntBASIC0.81□□□□□ -2.28
CLDN18P56856 AC005609.4-201ENST00000625071 447 ntBASIC0.81□□□□□ -2.28
CLDN18P56856 Y_RNA.122-201ENST00000363331 96 ntBASIC0.8□□□□□ -2.28
CLDN18P56856 Y_RNA.159-201ENST00000363674 87 ntBASIC0.8□□□□□ -2.28
CLDN18P56856 Y_RNA.169-201ENST00000363745 96 ntBASIC0.8□□□□□ -2.28
CLDN18P56856 RNU6-1329P-201ENST00000365664 107 ntBASIC0.8□□□□□ -2.28
CLDN18P56856 RNU5A-6P-201ENST00000384136 116 ntBASIC0.8□□□□□ -2.28
CLDN18P56856 AC016909.1-201ENST00000415916 166 ntBASIC0.8□□□□□ -2.28
CLDN18P56856 POLR2J4-204ENST00000418424 324 ntBASIC0.8□□□□□ -2.28
CLDN18P56856 AC063976.4-201ENST00000421971 163 ntBASIC0.8□□□□□ -2.28
CLDN18P56856 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.8□□□□□ -2.28
CLDN18P56856 MTCO2P18-201ENST00000457151 658 ntBASIC0.8□□□□□ -2.28
CLDN18P56856 SRRM1P2-201ENST00000464531 1192 ntBASIC0.8□□□□□ -2.28
CLDN18P56856 RPS29P1-201ENST00000465274 159 ntBASIC0.8□□□□□ -2.28
CLDN18P56856 MTCO3P38-201ENST00000468910 766 ntBASIC0.8□□□□□ -2.28
CLDN18P56856 AC105758.1-201ENST00000506038 399 ntBASIC0.8□□□□□ -2.28
CLDN18P56856 RNU4ATAC8P-201ENST00000516196 109 ntBASIC0.8□□□□□ -2.28
CLDN18P56856 RNU6-1038P-201ENST00000516516 104 ntBASIC0.8□□□□□ -2.28
CLDN18P56856 MTCO2P4-201ENST00000517968 247 ntBASIC0.8□□□□□ -2.28
CLDN18P56856 AP001372.4-201ENST00000524889 472 ntBASIC0.8□□□□□ -2.28
CLDN18P56856 CBX3P8-201ENST00000532412 525 ntBASIC0.8□□□□□ -2.28
CLDN18P56856 SCOCP1-201ENST00000554676 349 ntBASIC0.8□□□□□ -2.28
CLDN18P56856 AC092747.3-201ENST00000603769 301 ntBASIC0.8□□□□□ -2.28
CLDN18P56856 AL078603.1-201ENST00000603824 313 ntBASIC0.8□□□□□ -2.28
CLDN18P56856 Z94722.1-201ENST00000604328 474 ntBASIC0.8□□□□□ -2.28
CLDN18P56856 GHRLOS.1-201ENST00000610995 70 ntBASIC0.8□□□□□ -2.28
CLDN18P56856 RNU6-1266P-201ENST00000362794 105 ntBASIC0.79□□□□□ -2.28
CLDN18P56856 Y_RNA.796-201ENST00000364268 102 ntBASIC0.79□□□□□ -2.28
CLDN18P56856 Y_RNA.799-201ENST00000364992 102 ntBASIC0.79□□□□□ -2.28
CLDN18P56856 SNORD114-24-201ENST00000365029 72 ntBASIC0.79□□□□□ -2.28
CLDN18P56856 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.79□□□□□ -2.28
CLDN18P56856 AC073464.1-201ENST00000429823 534 ntBASIC0.79□□□□□ -2.28
CLDN18P56856 MRPS10P2-201ENST00000431226 381 ntBASIC0.79□□□□□ -2.28
CLDN18P56856 RNU6-221P-201ENST00000459541 99 ntBASIC0.79□□□□□ -2.28
CLDN18P56856 BET1P1-201ENST00000482276 359 ntBASIC0.79□□□□□ -2.28
CLDN18P56856 AF186996.7-201ENST00000492781 209 ntBASIC0.79□□□□□ -2.28
CLDN18P56856 RNU6-344P-201ENST00000516635 111 ntBASIC0.79□□□□□ -2.28
CLDN18P56856 AL137100.2-201ENST00000555786 315 ntBASIC0.79□□□□□ -2.28
CLDN18P56856 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.79□□□□□ -2.28
CLDN18P56856 MIR5695-201ENST00000579717 85 ntBASIC0.79□□□□□ -2.28
CLDN18P56856 AL020996.3-201ENST00000606617 222 ntBASIC0.79□□□□□ -2.28
CLDN18P56856 SNORD11B-201ENST00000607707 90 ntBASIC0.79□□□□□ -2.28
CLDN18P56856 AC073349.3-201ENST00000617616 186 ntBASIC0.79□□□□□ -2.28
CLDN18P56856 AL513423.1-201ENST00000621695 132 ntBASIC0.79□□□□□ -2.28
CLDN18P56856 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.79□□□□□ -2.28
CLDN18P56856 RNU1-36P-201ENST00000365130 165 ntBASIC0.78□□□□□ -2.28
CLDN18P56856 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.78□□□□□ -2.28
CLDN18P56856 RNU6-214P-201ENST00000384130 107 ntBASIC0.78□□□□□ -2.28
CLDN18P56856 RNU6-505P-201ENST00000384427 107 ntBASIC0.78□□□□□ -2.28
CLDN18P56856 Y_RNA.508-201ENST00000384502 114 ntBASIC0.78□□□□□ -2.28
CLDN18P56856 MIR19B1-201ENST00000384829 87 ntBASIC0.78□□□□□ -2.28
CLDN18P56856 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
CLDN18P56856 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC0.78□□□□□ -2.28
CLDN18P56856 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.78□□□□□ -2.28
CLDN18P56856 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.78□□□□□ -2.28
CLDN18P56856 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC0.78□□□□□ -2.28
CLDN18P56856 SNORD124-201ENST00000459577 104 ntBASIC0.78□□□□□ -2.28
CLDN18P56856 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.78□□□□□ -2.28
CLDN18P56856 PDCD5P2-201ENST00000507570 312 ntBASIC0.78□□□□□ -2.28
CLDN18P56856 RNA5SP220-201ENST00000516298 104 ntBASIC0.78□□□□□ -2.28
CLDN18P56856 AC090142.3-201ENST00000519012 385 ntBASIC0.78□□□□□ -2.28
CLDN18P56856 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC0.78□□□□□ -2.28
CLDN18P56856 MIR4778-201ENST00000577635 80 ntBASIC0.78□□□□□ -2.28
CLDN18P56856 MIR4698-201ENST00000577795 80 ntBASIC0.78□□□□□ -2.28
CLDN18P56856 AC087683.1-201ENST00000591187 441 ntBASIC0.78□□□□□ -2.28
CLDN18P56856 FAM71BP1-201ENST00000604431 523 ntBASIC0.78□□□□□ -2.28
CLDN18P56856 AL121757.2-201ENST00000611223 313 ntBASIC0.78□□□□□ -2.28
CLDN18P56856 U6.108-201ENST00000637764 58 ntBASIC0.78□□□□□ -2.28
CLDN18P56856 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.77□□□□□ -2.29
CLDN18P56856 RNU11-5P-201ENST00000391216 129 ntBASIC0.77□□□□□ -2.29
CLDN18P56856 RNU6-325P-201ENST00000411132 105 ntBASIC0.77□□□□□ -2.29
CLDN18P56856 RNU2-64P-201ENST00000411315 191 ntBASIC0.77□□□□□ -2.29
CLDN18P56856 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC0.77□□□□□ -2.29
CLDN18P56856 snoU13.18-201ENST00000459483 104 ntBASIC0.77□□□□□ -2.29
CLDN18P56856 PSMC1P5-201ENST00000512850 177 ntBASIC0.77□□□□□ -2.29
CLDN18P56856 RNA5SP168-201ENST00000516642 112 ntBASIC0.77□□□□□ -2.29
CLDN18P56856 RNA5SP454-201ENST00000517231 127 ntBASIC0.77□□□□□ -2.29
CLDN18P56856 AL157687.1-201ENST00000554853 619 ntBASIC0.77□□□□□ -2.29
CLDN18P56856 AL162424.1-201ENST00000602325 221 ntBASIC0.77□□□□□ -2.29
CLDN18P56856 MIR8076-201ENST00000611401 83 ntBASIC0.77□□□□□ -2.29
CLDN18P56856 AC103705.1-201ENST00000619013 241 ntBASIC0.77□□□□□ -2.29
CLDN18P56856 AC139792.3-201ENST00000623525 224 ntBASIC0.77□□□□□ -2.29
CLDN18P56856 AC008873.1-201ENST00000625051 138 ntBASIC0.77□□□□□ -2.29
CLDN18P56856 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.77□□□□□ -2.29
CLDN18P56856 Y_RNA.124-201ENST00000363339 93 ntBASIC0.76□□□□□ -2.29
CLDN18P56856 RNU4-66P-201ENST00000365199 138 ntBASIC0.76□□□□□ -2.29
CLDN18P56856 Y_RNA.381-201ENST00000365666 102 ntBASIC0.76□□□□□ -2.29
CLDN18P56856 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.76□□□□□ -2.29
CLDN18P56856 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.76□□□□□ -2.29
CLDN18P56856 AC002429.1-201ENST00000437672 148 ntBASIC0.76□□□□□ -2.29
CLDN18P56856 AL359672.1-201ENST00000442302 409 ntBASIC0.76□□□□□ -2.29
CLDN18P56856 RNA5SP401-201ENST00000515920 127 ntBASIC0.76□□□□□ -2.29
CLDN18P56856 RNA5SP54-201ENST00000516951 92 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 133.1 ms