Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 AC023141.11-201ENST00000508864 202 ntBASIC2.83□□□□□ -1.96
PER3P56645 ATP5EP1-201ENST00000510257 156 ntBASIC2.83□□□□□ -1.96
PER3P56645 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.83□□□□□ -1.96
PER3P56645 RNU6-56P-201ENST00000516986 93 ntBASIC2.83□□□□□ -1.96
PER3P56645 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.83□□□□□ -1.96
PER3P56645 MIR4643-201ENST00000577473 78 ntBASIC2.83□□□□□ -1.96
PER3P56645 MIR3668-201ENST00000582138 75 ntBASIC2.83□□□□□ -1.96
PER3P56645 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.83□□□□□ -1.96
PER3P56645 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.83□□□□□ -1.96
PER3P56645 AC008873.1-201ENST00000625051 138 ntBASIC2.83□□□□□ -1.96
PER3P56645 IGHVIII-44-202ENST00000636235 289 ntBASIC2.83□□□□□ -1.96
PER3P56645 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.83□□□□□ -1.96
PER3P56645 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
PER3P56645 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.82□□□□□ -1.96
PER3P56645 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
PER3P56645 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
PER3P56645 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
PER3P56645 SNORD27-201ENST00000363981 72 ntBASIC2.82□□□□□ -1.96
PER3P56645 RNU6-461P-201ENST00000364195 107 ntBASIC2.82□□□□□ -1.96
PER3P56645 RNU6-234P-201ENST00000365229 104 ntBASIC2.82□□□□□ -1.96
PER3P56645 RNU6-326P-201ENST00000365480 107 ntBASIC2.82□□□□□ -1.96
PER3P56645 RNU6-1264P-201ENST00000383891 107 ntBASIC2.82□□□□□ -1.96
PER3P56645 Y_RNA.418-201ENST00000384029 102 ntBASIC2.82□□□□□ -1.96
PER3P56645 Y_RNA.478-201ENST00000384358 107 ntBASIC2.82□□□□□ -1.96
PER3P56645 Y_RNA.569-201ENST00000384749 103 ntBASIC2.82□□□□□ -1.96
PER3P56645 MIR548B-201ENST00000385247 97 ntBASIC2.82□□□□□ -1.96
PER3P56645 SNORD58.1-201ENST00000391313 66 ntBASIC2.82□□□□□ -1.96
PER3P56645 EEF1A1P41-201ENST00000414667 207 ntBASIC2.82□□□□□ -1.96
PER3P56645 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.82□□□□□ -1.96
PER3P56645 MRPS10P1-201ENST00000448483 130 ntBASIC2.82□□□□□ -1.96
PER3P56645 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.82□□□□□ -1.96
PER3P56645 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC2.82□□□□□ -1.96
PER3P56645 RNA5SP367-201ENST00000516557 118 ntBASIC2.82□□□□□ -1.96
PER3P56645 RNU5F-4P-201ENST00000516581 114 ntBASIC2.82□□□□□ -1.96
PER3P56645 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.82□□□□□ -1.96
PER3P56645 AC107016.2-201ENST00000547968 190 ntBASIC2.82□□□□□ -1.96
PER3P56645 GTF3AP2-201ENST00000557014 266 ntBASIC2.82□□□□□ -1.96
PER3P56645 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.82□□□□□ -1.96
PER3P56645 AC006001.4-201ENST00000622243 395 ntBASIC2.82□□□□□ -1.96
PER3P56645 MIR6733-201ENST00000635723 61 ntBASIC2.82□□□□□ -1.96
PER3P56645 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
PER3P56645 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
PER3P56645 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.81□□□□□ -1.96
PER3P56645 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.81□□□□□ -1.96
PER3P56645 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.81□□□□□ -1.96
PER3P56645 RNU6-545P-201ENST00000362681 104 ntBASIC2.81□□□□□ -1.96
PER3P56645 Y_RNA.277-201ENST00000364754 102 ntBASIC2.81□□□□□ -1.96
PER3P56645 SNORA72.2-201ENST00000365028 127 ntBASIC2.81□□□□□ -1.96
PER3P56645 RNU6-1310P-201ENST00000384153 107 ntBASIC2.81□□□□□ -1.96
PER3P56645 FO393413.1-201ENST00000402892 195 ntBASIC2.81□□□□□ -1.96
PER3P56645 RNA5SP475-201ENST00000410568 110 ntBASIC2.81□□□□□ -1.96
PER3P56645 RNU2-14P-201ENST00000411053 191 ntBASIC2.81□□□□□ -1.96
PER3P56645 RPL23AP36-201ENST00000413895 458 ntBASIC2.81□□□□□ -1.96
PER3P56645 OOSP1P1-201ENST00000423265 274 ntBASIC2.81□□□□□ -1.96
PER3P56645 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.81□□□□□ -1.96
PER3P56645 RPL39P40-201ENST00000445481 146 ntBASIC2.81□□□□□ -1.96
PER3P56645 AC005042.3-201ENST00000453230 174 ntBASIC2.81□□□□□ -1.96
PER3P56645 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.81□□□□□ -1.96
PER3P56645 RNU6-107P-201ENST00000516643 102 ntBASIC2.81□□□□□ -1.96
PER3P56645 RNU2-31P-201ENST00000516954 155 ntBASIC2.81□□□□□ -1.96
PER3P56645 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.81□□□□□ -1.96
PER3P56645 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.81□□□□□ -1.96
PER3P56645 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.81□□□□□ -1.96
PER3P56645 MIR2682-201ENST00000580305 110 ntBASIC2.81□□□□□ -1.96
PER3P56645 UBL5P2-201ENST00000583788 219 ntBASIC2.81□□□□□ -1.96
PER3P56645 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.81□□□□□ -1.96
PER3P56645 AL033523.1-201ENST00000605153 153 ntBASIC2.81□□□□□ -1.96
PER3P56645 U2.14-201ENST00000615943 113 ntBASIC2.81□□□□□ -1.96
PER3P56645 AC141273.2-201ENST00000618989 130 ntBASIC2.81□□□□□ -1.96
PER3P56645 MIR1248-201ENST00000629190 106 ntBASIC2.81□□□□□ -1.96
PER3P56645 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
PER3P56645 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
PER3P56645 AL136360.1-201ENST00000503377 1900 ntBASIC2.81□□□□□ -1.96
PER3P56645 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
PER3P56645 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
PER3P56645 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
PER3P56645 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
PER3P56645 RNU6-1266P-201ENST00000362794 105 ntBASIC2.8□□□□□ -1.96
PER3P56645 RNU1-23P-201ENST00000363361 144 ntBASIC2.8□□□□□ -1.96
PER3P56645 Y_RNA.383-201ENST00000383855 97 ntBASIC2.8□□□□□ -1.96
PER3P56645 RNU6-338P-201ENST00000383888 105 ntBASIC2.8□□□□□ -1.96
PER3P56645 Y_RNA.552-201ENST00000384665 112 ntBASIC2.8□□□□□ -1.96
PER3P56645 MIR586-201ENST00000385035 97 ntBASIC2.8□□□□□ -1.96
PER3P56645 RNU2-54P-201ENST00000410299 190 ntBASIC2.8□□□□□ -1.96
PER3P56645 RNA5SP184-201ENST00000411071 108 ntBASIC2.8□□□□□ -1.96
PER3P56645 AC009963.1-201ENST00000417265 157 ntBASIC2.8□□□□□ -1.96
PER3P56645 AL161788.1-201ENST00000441805 169 ntBASIC2.8□□□□□ -1.96
PER3P56645 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.8□□□□□ -1.96
PER3P56645 RNU7-14P-201ENST00000459331 62 ntBASIC2.8□□□□□ -1.96
PER3P56645 HMGN2P9-201ENST00000476875 229 ntBASIC2.8□□□□□ -1.96
PER3P56645 RNU6-965P-201ENST00000516721 96 ntBASIC2.8□□□□□ -1.96
PER3P56645 RNU2-12P-201ENST00000517216 168 ntBASIC2.8□□□□□ -1.96
PER3P56645 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.8□□□□□ -1.96
PER3P56645 MIR3945-201ENST00000581853 98 ntBASIC2.8□□□□□ -1.96
PER3P56645 AC090616.3-201ENST00000582184 217 ntBASIC2.8□□□□□ -1.96
PER3P56645 MIR5739-201ENST00000619803 80 ntBASIC2.8□□□□□ -1.96
PER3P56645 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
PER3P56645 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
PER3P56645 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.79□□□□□ -1.96
PER3P56645 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 143 ms