Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AC098869.1-201ENST00000481627 292 ntBASIC2.27□□□□□ -2.05
CDH12P55289 AC025465.3-201ENST00000510570 311 ntBASIC2.27□□□□□ -2.05
CDH12P55289 AC074133.1-201ENST00000515696 183 ntBASIC2.27□□□□□ -2.05
CDH12P55289 AC109329.2-201ENST00000519658 482 ntBASIC2.27□□□□□ -2.05
CDH12P55289 CYCSP23-201ENST00000519781 313 ntBASIC2.27□□□□□ -2.05
CDH12P55289 AP002001.1-203ENST00000534002 267 ntBASIC2.27□□□□□ -2.05
CDH12P55289 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.27□□□□□ -2.05
CDH12P55289 MIR4300-201ENST00000581016 96 ntBASIC2.27□□□□□ -2.05
CDH12P55289 MIR4503-201ENST00000582187 83 ntBASIC2.27□□□□□ -2.05
CDH12P55289 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.27□□□□□ -2.05
CDH12P55289 AC068205.3-201ENST00000636385 468 ntBASIC2.27□□□□□ -2.05
CDH12P55289 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
CDH12P55289 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
CDH12P55289 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
CDH12P55289 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
CDH12P55289 RNU6-626P-201ENST00000363354 107 ntBASIC2.26□□□□□ -2.05
CDH12P55289 RNU1-138P-201ENST00000384093 164 ntBASIC2.26□□□□□ -2.05
CDH12P55289 RNU6-20P-201ENST00000384106 107 ntBASIC2.26□□□□□ -2.05
CDH12P55289 MIR27B-201ENST00000385129 97 ntBASIC2.26□□□□□ -2.05
CDH12P55289 RPL21P38-201ENST00000418090 167 ntBASIC2.26□□□□□ -2.05
CDH12P55289 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.26□□□□□ -2.05
CDH12P55289 COTL1P1-201ENST00000422309 375 ntBASIC2.26□□□□□ -2.05
CDH12P55289 AC063976.3-201ENST00000426849 329 ntBASIC2.26□□□□□ -2.05
CDH12P55289 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.26□□□□□ -2.05
CDH12P55289 AL513328.1-201ENST00000446460 224 ntBASIC2.26□□□□□ -2.05
CDH12P55289 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.26□□□□□ -2.05
CDH12P55289 RNU6-625P-201ENST00000459412 107 ntBASIC2.26□□□□□ -2.05
CDH12P55289 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.26□□□□□ -2.05
CDH12P55289 Y_RNA.713-201ENST00000517013 96 ntBASIC2.26□□□□□ -2.05
CDH12P55289 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.26□□□□□ -2.05
CDH12P55289 PRELID2P1-201ENST00000552837 301 ntBASIC2.26□□□□□ -2.05
CDH12P55289 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.26□□□□□ -2.05
CDH12P55289 7SK.10-201ENST00000621414 298 ntBASIC2.26□□□□□ -2.05
CDH12P55289 AC006386.2-201ENST00000624491 75 ntBASIC2.26□□□□□ -2.05
CDH12P55289 AC012005.1-201ENST00000624575 75 ntBASIC2.26□□□□□ -2.05
CDH12P55289 AC008873.1-201ENST00000625051 138 ntBASIC2.26□□□□□ -2.05
CDH12P55289 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.26□□□□□ -2.05
CDH12P55289 AL365361.1-201ENST00000566942 3481 ntBASIC2.26□□□□□ -2.05
CDH12P55289 MIR21-201ENST00000362134 72 ntBASIC2.25□□□□□ -2.05
CDH12P55289 RNU6-743P-201ENST00000364151 106 ntBASIC2.25□□□□□ -2.05
CDH12P55289 RNU6-196P-201ENST00000384315 107 ntBASIC2.25□□□□□ -2.05
CDH12P55289 SNORD115-46-201ENST00000390982 71 ntBASIC2.25□□□□□ -2.05
CDH12P55289 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.25□□□□□ -2.05
CDH12P55289 RAB28P5-201ENST00000427490 651 ntBASIC2.25□□□□□ -2.05
CDH12P55289 CR769767.1-201ENST00000436337 346 ntBASIC2.25□□□□□ -2.05
CDH12P55289 HMGN2P18-201ENST00000450680 270 ntBASIC2.25□□□□□ -2.05
CDH12P55289 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.25□□□□□ -2.05
CDH12P55289 MIR4423-201ENST00000580922 80 ntBASIC2.25□□□□□ -2.05
CDH12P55289 MIR5194-201ENST00000582634 120 ntBASIC2.25□□□□□ -2.05
CDH12P55289 LINC02555-201ENST00000563933 1951 ntBASIC2.25□□□□□ -2.05
CDH12P55289 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CDH12P55289 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.24□□□□□ -2.05
CDH12P55289 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
CDH12P55289 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.24□□□□□ -2.05
CDH12P55289 SNORA80A-201ENST00000363922 136 ntBASIC2.24□□□□□ -2.05
CDH12P55289 RNU6-1305P-201ENST00000364353 104 ntBASIC2.24□□□□□ -2.05
CDH12P55289 Y_RNA.498-201ENST00000384460 102 ntBASIC2.24□□□□□ -2.05
CDH12P55289 RNU6-1072P-201ENST00000384703 107 ntBASIC2.24□□□□□ -2.05
CDH12P55289 RNU6-443P-201ENST00000384780 107 ntBASIC2.24□□□□□ -2.05
CDH12P55289 MIR215-201ENST00000384858 110 ntBASIC2.24□□□□□ -2.05
CDH12P55289 MIR561-201ENST00000385216 97 ntBASIC2.24□□□□□ -2.05
CDH12P55289 MIR548B-201ENST00000385247 97 ntBASIC2.24□□□□□ -2.05
CDH12P55289 MIR1283-1-201ENST00000408494 87 ntBASIC2.24□□□□□ -2.05
CDH12P55289 HMGN2P9-201ENST00000476875 229 ntBASIC2.24□□□□□ -2.05
CDH12P55289 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.24□□□□□ -2.05
CDH12P55289 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.24□□□□□ -2.05
CDH12P55289 RNA5SP320-201ENST00000516263 124 ntBASIC2.24□□□□□ -2.05
CDH12P55289 AP003733.2-201ENST00000529409 171 ntBASIC2.24□□□□□ -2.05
CDH12P55289 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.24□□□□□ -2.05
CDH12P55289 EIF4BP1-201ENST00000554881 351 ntBASIC2.24□□□□□ -2.05
CDH12P55289 MIR4319-201ENST00000577285 85 ntBASIC2.24□□□□□ -2.05
CDH12P55289 LARP7P3-201ENST00000579888 337 ntBASIC2.24□□□□□ -2.05
CDH12P55289 MIR7106-201ENST00000612419 65 ntBASIC2.24□□□□□ -2.05
CDH12P55289 MIR376A1-201ENST00000616574 68 ntBASIC2.24□□□□□ -2.05
CDH12P55289 MIR8062-201ENST00000621515 85 ntBASIC2.24□□□□□ -2.05
CDH12P55289 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.24□□□□□ -2.05
CDH12P55289 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.24□□□□□ -2.05
CDH12P55289 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.23□□□□□ -2.05
CDH12P55289 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.23□□□□□ -2.05
CDH12P55289 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.23□□□□□ -2.05
CDH12P55289 AC062016.1-201ENST00000355719 319 ntBASIC2.23□□□□□ -2.05
CDH12P55289 snoU2_19.2-201ENST00000363024 80 ntBASIC2.23□□□□□ -2.05
CDH12P55289 SNORD31B-201ENST00000364977 69 ntBASIC2.23□□□□□ -2.05
CDH12P55289 SNORA25B-201ENST00000365507 128 ntBASIC2.23□□□□□ -2.05
CDH12P55289 Y_RNA.396-201ENST00000383949 103 ntBASIC2.23□□□□□ -2.05
CDH12P55289 SNORD63-201ENST00000384262 68 ntBASIC2.23□□□□□ -2.05
CDH12P55289 Y_RNA.462-201ENST00000384268 102 ntBASIC2.23□□□□□ -2.05
CDH12P55289 MIR586-201ENST00000385035 97 ntBASIC2.23□□□□□ -2.05
CDH12P55289 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.23□□□□□ -2.05
CDH12P55289 RNU6-1143P-201ENST00000516125 104 ntBASIC2.23□□□□□ -2.05
CDH12P55289 RNU6-966P-201ENST00000516479 104 ntBASIC2.23□□□□□ -2.05
CDH12P55289 RNU6-667P-201ENST00000517186 102 ntBASIC2.23□□□□□ -2.05
CDH12P55289 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.23□□□□□ -2.05
CDH12P55289 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.23□□□□□ -2.05
CDH12P55289 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.23□□□□□ -2.05
CDH12P55289 AL161670.1-201ENST00000554348 137 ntBASIC2.23□□□□□ -2.05
CDH12P55289 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.23□□□□□ -2.05
CDH12P55289 AL109918.3-201ENST00000603072 338 ntBASIC2.23□□□□□ -2.05
CDH12P55289 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.23□□□□□ -2.05
CDH12P55289 SNORD114-30-201ENST00000364448 72 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 125.6 ms