Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 ZNF962P-201ENST00000443465 3140 ntBASIC3.75□□□□□ -1.81
EPHA4P54764 LINC02471-203ENST00000641941 4752 ntBASIC3.75□□□□□ -1.81
EPHA4P54764 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
EPHA4P54764 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.74□□□□□ -1.81
EPHA4P54764 SNORA14A-201ENST00000364773 135 ntBASIC3.74□□□□□ -1.81
EPHA4P54764 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
EPHA4P54764 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
EPHA4P54764 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.74□□□□□ -1.81
EPHA4P54764 AC009414.1-201ENST00000427200 443 ntBASIC3.74□□□□□ -1.81
EPHA4P54764 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.74□□□□□ -1.81
EPHA4P54764 SNORD77.4-201ENST00000516158 81 ntBASIC3.74□□□□□ -1.81
EPHA4P54764 RNU6-1061P-201ENST00000516530 99 ntBASIC3.74□□□□□ -1.81
EPHA4P54764 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.74□□□□□ -1.81
EPHA4P54764 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.74□□□□□ -1.81
EPHA4P54764 MIR4662B-201ENST00000579498 81 ntBASIC3.74□□□□□ -1.81
EPHA4P54764 MIR4444-1-201ENST00000581696 74 ntBASIC3.74□□□□□ -1.81
EPHA4P54764 AC105245.1-201ENST00000581934 244 ntBASIC3.74□□□□□ -1.81
EPHA4P54764 MIR4444-2-201ENST00000584390 74 ntBASIC3.74□□□□□ -1.81
EPHA4P54764 MIR4438-201ENST00000585271 93 ntBASIC3.74□□□□□ -1.81
EPHA4P54764 AL591424.2-201ENST00000617023 128 ntBASIC3.74□□□□□ -1.81
EPHA4P54764 AC012442.3-202ENST00000636742 206 ntBASIC3.74□□□□□ -1.81
EPHA4P54764 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC3.74□□□□□ -1.81
EPHA4P54764 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
EPHA4P54764 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.73□□□□□ -1.81
EPHA4P54764 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
EPHA4P54764 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
EPHA4P54764 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.73□□□□□ -1.81
EPHA4P54764 RNU6-1336P-201ENST00000383886 109 ntBASIC3.73□□□□□ -1.81
EPHA4P54764 Z98941.1-201ENST00000407764 100 ntBASIC3.73□□□□□ -1.81
EPHA4P54764 AL139247.1-201ENST00000422768 325 ntBASIC3.73□□□□□ -1.81
EPHA4P54764 AL158147.1-201ENST00000443970 75 ntBASIC3.73□□□□□ -1.81
EPHA4P54764 AL133162.1-201ENST00000463228 453 ntBASIC3.73□□□□□ -1.81
EPHA4P54764 SCARNA17.1-201ENST00000516211 143 ntBASIC3.73□□□□□ -1.81
EPHA4P54764 SCARNA17.2-201ENST00000516334 143 ntBASIC3.73□□□□□ -1.81
EPHA4P54764 RNU7-172P-201ENST00000517125 64 ntBASIC3.73□□□□□ -1.81
EPHA4P54764 RNA5SP490-201ENST00000517141 136 ntBASIC3.73□□□□□ -1.81
EPHA4P54764 AL929325.1-201ENST00000603096 117 ntBASIC3.73□□□□□ -1.81
EPHA4P54764 AC008739.3-201ENST00000603262 127 ntBASIC3.73□□□□□ -1.81
EPHA4P54764 JPX_2.1-201ENST00000614161 69 ntBASIC3.73□□□□□ -1.81
EPHA4P54764 SCARNA17.4-201ENST00000614296 143 ntBASIC3.73□□□□□ -1.81
EPHA4P54764 AL121772.2-201ENST00000614331 297 ntBASIC3.73□□□□□ -1.81
EPHA4P54764 MIR6075-201ENST00000620782 95 ntBASIC3.73□□□□□ -1.81
EPHA4P54764 MIR7157-201ENST00000635801 60 ntBASIC3.73□□□□□ -1.81
EPHA4P54764 MAPK10-373ENST00000641983 6772 ntBASIC3.73□□□□□ -1.81
EPHA4P54764 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
EPHA4P54764 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.73□□□□□ -1.81
EPHA4P54764 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
EPHA4P54764 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
EPHA4P54764 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
EPHA4P54764 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.72□□□□□ -1.81
EPHA4P54764 MIR449B-201ENST00000384995 97 ntBASIC3.72□□□□□ -1.81
EPHA4P54764 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
EPHA4P54764 MIR1253-201ENST00000408273 105 ntBASIC3.72□□□□□ -1.81
EPHA4P54764 HMGN2P7-201ENST00000456186 273 ntBASIC3.72□□□□□ -1.81
EPHA4P54764 RPL27AP5-201ENST00000469428 449 ntBASIC3.72□□□□□ -1.81
EPHA4P54764 AC097462.1-201ENST00000514125 324 ntBASIC3.72□□□□□ -1.81
EPHA4P54764 SCARNA14-201ENST00000516903 136 ntBASIC3.72□□□□□ -1.81
EPHA4P54764 RNA5SP143-201ENST00000516936 115 ntBASIC3.72□□□□□ -1.81
EPHA4P54764 MIR5187-201ENST00000583479 76 ntBASIC3.72□□□□□ -1.81
EPHA4P54764 SNORA51-201ENST00000606420 132 ntBASIC3.72□□□□□ -1.81
EPHA4P54764 AC244205.2-202ENST00000635781 342 ntBASIC3.72□□□□□ -1.81
EPHA4P54764 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.72□□□□□ -1.81
EPHA4P54764 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
EPHA4P54764 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.81
EPHA4P54764 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
EPHA4P54764 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
EPHA4P54764 AP001486.2-201ENST00000561652 5113 ntBASIC3.71□□□□□ -1.82
EPHA4P54764 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.71□□□□□ -1.82
EPHA4P54764 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
EPHA4P54764 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.71□□□□□ -1.82
EPHA4P54764 AC103988.1-201ENST00000566382 2177 ntBASIC3.71□□□□□ -1.82
EPHA4P54764 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
EPHA4P54764 RNA5SP124-201ENST00000362739 110 ntBASIC3.71□□□□□ -1.82
EPHA4P54764 Y_RNA.111-201ENST00000363248 100 ntBASIC3.71□□□□□ -1.82
EPHA4P54764 RNU1-22P-201ENST00000363334 158 ntBASIC3.71□□□□□ -1.82
EPHA4P54764 RNU6-647P-201ENST00000364243 107 ntBASIC3.71□□□□□ -1.82
EPHA4P54764 Y_RNA.634-201ENST00000364811 113 ntBASIC3.71□□□□□ -1.82
EPHA4P54764 U8.11-201ENST00000384699 133 ntBASIC3.71□□□□□ -1.82
EPHA4P54764 RNU11-5P-201ENST00000391216 129 ntBASIC3.71□□□□□ -1.82
EPHA4P54764 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
EPHA4P54764 AC063976.3-201ENST00000426849 329 ntBASIC3.71□□□□□ -1.82
EPHA4P54764 RPS12P18-201ENST00000442381 270 ntBASIC3.71□□□□□ -1.82
EPHA4P54764 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.71□□□□□ -1.82
EPHA4P54764 U8.18-201ENST00000459285 133 ntBASIC3.71□□□□□ -1.82
EPHA4P54764 CKS1BP2-201ENST00000497342 240 ntBASIC3.71□□□□□ -1.82
EPHA4P54764 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.71□□□□□ -1.82
EPHA4P54764 SNORA4.4-201ENST00000515921 135 ntBASIC3.71□□□□□ -1.82
EPHA4P54764 SNORA18.4-201ENST00000516440 124 ntBASIC3.71□□□□□ -1.82
EPHA4P54764 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.71□□□□□ -1.82
EPHA4P54764 AL670379.3-201ENST00000605040 251 ntBASIC3.71□□□□□ -1.82
EPHA4P54764 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC3.71□□□□□ -1.82
EPHA4P54764 AC110079.1-202ENST00000635213 138 ntBASIC3.71□□□□□ -1.82
EPHA4P54764 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
EPHA4P54764 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.82
EPHA4P54764 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
EPHA4P54764 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
EPHA4P54764 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC3.7□□□□□ -1.82
EPHA4P54764 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.7□□□□□ -1.82
EPHA4P54764 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
EPHA4P54764 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 122.6 ms