Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 MIR3976-201ENST00000606807 139 ntBASIC1.58□□□□□ -2.16
GPC3P51654 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.58□□□□□ -2.16
GPC3P51654 TCL6_2.1-201ENST00000615162 119 ntBASIC1.58□□□□□ -2.16
GPC3P51654 AC007014.2-201ENST00000615581 479 ntBASIC1.58□□□□□ -2.16
GPC3P51654 AC005562.2-201ENST00000618264 111 ntBASIC1.58□□□□□ -2.16
GPC3P51654 SCARNA4-201ENST00000629045 128 ntBASIC1.58□□□□□ -2.16
GPC3P51654 MTND4P5-201ENST00000435821 1374 ntBASIC1.58□□□□□ -2.16
GPC3P51654 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
GPC3P51654 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.57□□□□□ -2.16
GPC3P51654 MIR340-201ENST00000362125 95 ntBASIC1.57□□□□□ -2.16
GPC3P51654 Y_RNA.151-201ENST00000363566 112 ntBASIC1.57□□□□□ -2.16
GPC3P51654 RNU6-596P-201ENST00000365395 98 ntBASIC1.57□□□□□ -2.16
GPC3P51654 RNU6-296P-201ENST00000384608 107 ntBASIC1.57□□□□□ -2.16
GPC3P51654 MTND1P4-201ENST00000435196 415 ntBASIC1.57□□□□□ -2.16
GPC3P51654 JTBP1-201ENST00000441314 247 ntBASIC1.57□□□□□ -2.16
GPC3P51654 AC069257.2-201ENST00000441819 155 ntBASIC1.57□□□□□ -2.16
GPC3P51654 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.57□□□□□ -2.16
GPC3P51654 AC245517.4-201ENST00000448601 281 ntBASIC1.57□□□□□ -2.16
GPC3P51654 AC074290.1-201ENST00000448883 135 ntBASIC1.57□□□□□ -2.16
GPC3P51654 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC1.57□□□□□ -2.16
GPC3P51654 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.57□□□□□ -2.16
GPC3P51654 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.57□□□□□ -2.16
GPC3P51654 RNU1-54P-201ENST00000517181 120 ntBASIC1.57□□□□□ -2.16
GPC3P51654 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.57□□□□□ -2.16
GPC3P51654 AP000907.4-201ENST00000604143 237 ntBASIC1.57□□□□□ -2.16
GPC3P51654 MIR8063-201ENST00000621930 81 ntBASIC1.57□□□□□ -2.16
GPC3P51654 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.57□□□□□ -2.16
GPC3P51654 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
GPC3P51654 AC010615.1-201ENST00000594254 1764 ntBASIC1.57□□□□□ -2.16
GPC3P51654 AL161722.3-201ENST00000605789 2983 ntBASIC1.56□□□□□ -2.16
GPC3P51654 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.56□□□□□ -2.16
GPC3P51654 AL391987.6-201ENST00000305671 199 ntBASIC1.56□□□□□ -2.16
GPC3P51654 U8.1-201ENST00000362843 134 ntBASIC1.56□□□□□ -2.16
GPC3P51654 Y_RNA.72-201ENST00000362894 103 ntBASIC1.56□□□□□ -2.16
GPC3P51654 RNU6-137P-201ENST00000363680 108 ntBASIC1.56□□□□□ -2.16
GPC3P51654 SNORD115-32-201ENST00000364079 82 ntBASIC1.56□□□□□ -2.16
GPC3P51654 RNU6-1019P-201ENST00000364424 107 ntBASIC1.56□□□□□ -2.16
GPC3P51654 Y_RNA.505-201ENST00000384489 102 ntBASIC1.56□□□□□ -2.16
GPC3P51654 SNORA12.2-201ENST00000391040 156 ntBASIC1.56□□□□□ -2.16
GPC3P51654 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.56□□□□□ -2.16
GPC3P51654 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.56□□□□□ -2.16
GPC3P51654 HSPE1P9-201ENST00000440046 311 ntBASIC1.56□□□□□ -2.16
GPC3P51654 AC114982.1-201ENST00000469402 321 ntBASIC1.56□□□□□ -2.16
GPC3P51654 RPL23AP75-201ENST00000491601 451 ntBASIC1.56□□□□□ -2.16
GPC3P51654 RNA5SP445-201ENST00000515889 115 ntBASIC1.56□□□□□ -2.16
GPC3P51654 RNU2-34P-201ENST00000516534 121 ntBASIC1.56□□□□□ -2.16
GPC3P51654 RNA5SP454-201ENST00000517231 127 ntBASIC1.56□□□□□ -2.16
GPC3P51654 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.56□□□□□ -2.16
GPC3P51654 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.56□□□□□ -2.16
GPC3P51654 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.56□□□□□ -2.16
GPC3P51654 AC092794.1-201ENST00000612734 582 ntBASIC1.56□□□□□ -2.16
GPC3P51654 ICE2P2-201ENST00000483823 2787 ntBASIC1.55□□□□□ -2.16
GPC3P51654 SNORD33-201ENST00000362761 85 ntBASIC1.55□□□□□ -2.16
GPC3P51654 AL590632.1-201ENST00000424289 371 ntBASIC1.55□□□□□ -2.16
GPC3P51654 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.55□□□□□ -2.16
GPC3P51654 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.55□□□□□ -2.16
GPC3P51654 SNRPGP13-201ENST00000442212 177 ntBASIC1.55□□□□□ -2.16
GPC3P51654 snoU13.6-201ENST00000458785 104 ntBASIC1.55□□□□□ -2.16
GPC3P51654 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.55□□□□□ -2.16
GPC3P51654 RPL26P26-201ENST00000480251 434 ntBASIC1.55□□□□□ -2.16
GPC3P51654 RNU6-566P-201ENST00000516790 107 ntBASIC1.55□□□□□ -2.16
GPC3P51654 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.55□□□□□ -2.16
GPC3P51654 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.55□□□□□ -2.16
GPC3P51654 MIR4753-201ENST00000585119 83 ntBASIC1.55□□□□□ -2.16
GPC3P51654 MIR3942-201ENST00000585264 109 ntBASIC1.55□□□□□ -2.16
GPC3P51654 BX322639.1-202ENST00000423987 2213 ntBASIC1.55□□□□□ -2.16
GPC3P51654 MTND5P10-201ENST00000603719 1809 ntBASIC1.54□□□□□ -2.16
GPC3P51654 AC100821.1-201ENST00000523153 2479 ntBASIC1.54□□□□□ -2.16
GPC3P51654 RNU6-862P-201ENST00000362804 105 ntBASIC1.54□□□□□ -2.16
GPC3P51654 SNORD50.1-201ENST00000362987 71 ntBASIC1.54□□□□□ -2.16
GPC3P51654 RNY1P10-201ENST00000363268 113 ntBASIC1.54□□□□□ -2.16
GPC3P51654 SNORD115-8-201ENST00000363856 82 ntBASIC1.54□□□□□ -2.16
GPC3P51654 RNU1-96P-201ENST00000364163 162 ntBASIC1.54□□□□□ -2.16
GPC3P51654 Y_RNA.238-201ENST00000364441 102 ntBASIC1.54□□□□□ -2.16
GPC3P51654 RNU6-593P-201ENST00000364716 112 ntBASIC1.54□□□□□ -2.16
GPC3P51654 SNORD115-38-201ENST00000365037 82 ntBASIC1.54□□□□□ -2.16
GPC3P51654 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
GPC3P51654 SNORA18.2-201ENST00000383865 132 ntBASIC1.54□□□□□ -2.16
GPC3P51654 RNU6-245P-201ENST00000384020 107 ntBASIC1.54□□□□□ -2.16
GPC3P51654 Y_RNA.490-201ENST00000384413 102 ntBASIC1.54□□□□□ -2.16
GPC3P51654 RNU6-831P-201ENST00000384548 107 ntBASIC1.54□□□□□ -2.16
GPC3P51654 MIR153-2-201ENST00000385225 87 ntBASIC1.54□□□□□ -2.16
GPC3P51654 MTCO3P29-201ENST00000432119 779 ntBASIC1.54□□□□□ -2.16
GPC3P51654 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.54□□□□□ -2.16
GPC3P51654 AC009237.7-201ENST00000447357 229 ntBASIC1.54□□□□□ -2.16
GPC3P51654 AC079354.2-201ENST00000453523 154 ntBASIC1.54□□□□□ -2.16
GPC3P51654 AC010531.2-201ENST00000465012 153 ntBASIC1.54□□□□□ -2.16
GPC3P51654 AF186996.7-201ENST00000492781 209 ntBASIC1.54□□□□□ -2.16
GPC3P51654 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.54□□□□□ -2.16
GPC3P51654 RNU6-358P-201ENST00000516564 75 ntBASIC1.54□□□□□ -2.16
GPC3P51654 MIR4273-201ENST00000582824 84 ntBASIC1.54□□□□□ -2.16
GPC3P51654 AC060780.3-201ENST00000589464 80 ntBASIC1.54□□□□□ -2.16
GPC3P51654 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.54□□□□□ -2.16
GPC3P51654 AC068205.3-201ENST00000636385 468 ntBASIC1.54□□□□□ -2.16
GPC3P51654 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.54□□□□□ -2.16
GPC3P51654 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
GPC3P51654 RNU6-271P-201ENST00000363858 105 ntBASIC1.53□□□□□ -2.16
GPC3P51654 Y_RNA.327-201ENST00000365201 102 ntBASIC1.53□□□□□ -2.16
GPC3P51654 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
GPC3P51654 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms