Protein–RNA interactions for Protein: P50748

KNTC1, Kinetochore-associated protein 1, humanhuman

Predictions only

Length 2,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1P50748 SNORD105-201ENST00000386910 85 ntBASIC0.05□□□□□ -2.4
KNTC1P50748 RNA5SP25-201ENST00000410815 110 ntBASIC0.05□□□□□ -2.4
KNTC1P50748 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC0.05□□□□□ -2.4
KNTC1P50748 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC0.05□□□□□ -2.4
KNTC1P50748 AL512286.1-201ENST00000439244 400 ntBASIC0.05□□□□□ -2.4
KNTC1P50748 RNU7-57P-201ENST00000459540 60 ntBASIC0.05□□□□□ -2.4
KNTC1P50748 MTCO2P6-201ENST00000463134 685 ntBASIC0.05□□□□□ -2.4
KNTC1P50748 AC104982.1-201ENST00000478775 574 ntBASIC0.05□□□□□ -2.4
KNTC1P50748 NDUFA4P2-201ENST00000489989 244 ntBASIC0.05□□□□□ -2.4
KNTC1P50748 OR9P1P-201ENST00000496431 281 ntBASIC0.05□□□□□ -2.4
KNTC1P50748 RNU2-34P-201ENST00000516534 121 ntBASIC0.05□□□□□ -2.4
KNTC1P50748 AC023050.3-201ENST00000541142 333 ntBASIC0.05□□□□□ -2.4
KNTC1P50748 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.05□□□□□ -2.4
KNTC1P50748 AC025627.3-201ENST00000582078 182 ntBASIC0.05□□□□□ -2.4
KNTC1P50748 MIR4723-201ENST00000585070 81 ntBASIC0.05□□□□□ -2.4
KNTC1P50748 AC008507.2-201ENST00000588402 1176 ntBASIC0.05□□□□□ -2.4
KNTC1P50748 AL390123.1-201ENST00000603216 237 ntBASIC0.05□□□□□ -2.4
KNTC1P50748 AC018714.1-201ENST00000605028 208 ntBASIC0.05□□□□□ -2.4
KNTC1P50748 BCRP9-201ENST00000605312 388 ntBASIC0.05□□□□□ -2.4
KNTC1P50748 PRELID3BP2-201ENST00000605362 201 ntBASIC0.05□□□□□ -2.4
KNTC1P50748 RMST_3.1-201ENST00000611651 109 ntBASIC0.05□□□□□ -2.4
KNTC1P50748 PCGEM1.1-201ENST00000613431 131 ntBASIC0.05□□□□□ -2.4
KNTC1P50748 AL078595.3-201ENST00000623815 1166 ntBASIC0.05□□□□□ -2.4
KNTC1P50748 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC0.04□□□□□ -2.4
KNTC1P50748 MIR409-201ENST00000362237 79 ntBASIC0.04□□□□□ -2.4
KNTC1P50748 RNU6-545P-201ENST00000362681 104 ntBASIC0.04□□□□□ -2.4
KNTC1P50748 SNORD114-16-201ENST00000363044 70 ntBASIC0.04□□□□□ -2.4
KNTC1P50748 RNY4P16-201ENST00000364768 94 ntBASIC0.04□□□□□ -2.4
KNTC1P50748 RNU6-641P-201ENST00000384006 107 ntBASIC0.04□□□□□ -2.4
KNTC1P50748 RNU6-769P-201ENST00000384407 104 ntBASIC0.04□□□□□ -2.4
KNTC1P50748 MIR214-201ENST00000385214 110 ntBASIC0.04□□□□□ -2.4
KNTC1P50748 RNU6-57P-201ENST00000411348 103 ntBASIC0.04□□□□□ -2.4
KNTC1P50748 AC092809.3-201ENST00000415453 231 ntBASIC0.04□□□□□ -2.4
KNTC1P50748 MTATP6P16-201ENST00000434543 526 ntBASIC0.04□□□□□ -2.4
KNTC1P50748 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC0.04□□□□□ -2.4
KNTC1P50748 SNORA68.3-201ENST00000515906 83 ntBASIC0.04□□□□□ -2.4
KNTC1P50748 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC0.04□□□□□ -2.4
KNTC1P50748 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC0.04□□□□□ -2.4
KNTC1P50748 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC0.04□□□□□ -2.4
KNTC1P50748 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.04□□□□□ -2.4
KNTC1P50748 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC0.04□□□□□ -2.4
KNTC1P50748 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC0.04□□□□□ -2.4
KNTC1P50748 AP001836.1-201ENST00000604675 523 ntBASIC0.04□□□□□ -2.4
KNTC1P50748 MIR6516-201ENST00000630554 81 ntBASIC0.04□□□□□ -2.4
KNTC1P50748 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.03□□□□□ -2.4
KNTC1P50748 Y_RNA.142-201ENST00000363491 102 ntBASIC0.03□□□□□ -2.4
KNTC1P50748 RNU6-224P-201ENST00000384055 107 ntBASIC0.03□□□□□ -2.4
KNTC1P50748 RNU6-541P-201ENST00000384709 110 ntBASIC0.03□□□□□ -2.4
KNTC1P50748 Y_RNA.576-201ENST00000384781 102 ntBASIC0.03□□□□□ -2.4
KNTC1P50748 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.03□□□□□ -2.4
KNTC1P50748 Y_RNA.610-201ENST00000410681 103 ntBASIC0.03□□□□□ -2.4
KNTC1P50748 RNA5SP222-201ENST00000411039 105 ntBASIC0.03□□□□□ -2.4
KNTC1P50748 RPS26P42-201ENST00000413485 326 ntBASIC0.03□□□□□ -2.4
KNTC1P50748 AC093019.1-201ENST00000443135 252 ntBASIC0.03□□□□□ -2.4
KNTC1P50748 EPS15P1-201ENST00000448836 336 ntBASIC0.03□□□□□ -2.4
KNTC1P50748 AC022493.2-201ENST00000506122 481 ntBASIC0.03□□□□□ -2.4
KNTC1P50748 MTND3P25-201ENST00000509243 135 ntBASIC0.03□□□□□ -2.4
KNTC1P50748 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.03□□□□□ -2.4
KNTC1P50748 AC025465.4-201ENST00000513422 638 ntBASIC0.03□□□□□ -2.4
KNTC1P50748 RNU6-1291P-201ENST00000516591 104 ntBASIC0.03□□□□□ -2.4
KNTC1P50748 AF235103.2-201ENST00000525753 346 ntBASIC0.03□□□□□ -2.4
KNTC1P50748 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.03□□□□□ -2.4
KNTC1P50748 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC0.03□□□□□ -2.4
KNTC1P50748 MTND3P19-201ENST00000603825 345 ntBASIC0.03□□□□□ -2.4
KNTC1P50748 AC064872.1-201ENST00000604823 1072 ntBASIC0.03□□□□□ -2.4
KNTC1P50748 AP002360.4-201ENST00000606980 481 ntBASIC0.03□□□□□ -2.4
KNTC1P50748 AC068792.1-201ENST00000621354 417 ntBASIC0.03□□□□□ -2.4
KNTC1P50748 AC139792.3-201ENST00000623525 224 ntBASIC0.03□□□□□ -2.4
KNTC1P50748 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.03□□□□□ -2.4
KNTC1P50748 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.03□□□□□ -2.4
KNTC1P50748 SNORD113.3-201ENST00000364630 78 ntBASIC0.03□□□□□ -2.4
KNTC1P50748 Y_RNA.504-201ENST00000384481 104 ntBASIC0.03□□□□□ -2.4
KNTC1P50748 MIR573-201ENST00000384964 99 ntBASIC0.03□□□□□ -2.4
KNTC1P50748 AC007283.2-201ENST00000424739 197 ntBASIC0.03□□□□□ -2.4
KNTC1P50748 GPR143P-201ENST00000434155 205 ntBASIC0.03□□□□□ -2.4
KNTC1P50748 FABP5P4-201ENST00000437203 171 ntBASIC0.03□□□□□ -2.4
KNTC1P50748 RPL22P17-201ENST00000438729 315 ntBASIC0.03□□□□□ -2.4
KNTC1P50748 RNU7-182P-201ENST00000459009 62 ntBASIC0.03□□□□□ -2.4
KNTC1P50748 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.03□□□□□ -2.4
KNTC1P50748 SNORD27.1-201ENST00000516319 72 ntBASIC0.03□□□□□ -2.4
KNTC1P50748 AC090572.1-201ENST00000519251 160 ntBASIC0.03□□□□□ -2.4
KNTC1P50748 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC0.03□□□□□ -2.4
KNTC1P50748 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.03□□□□□ -2.4
KNTC1P50748 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC0.03□□□□□ -2.4
KNTC1P50748 MIR4768-201ENST00000585270 74 ntBASIC0.03□□□□□ -2.4
KNTC1P50748 AC008521.1-201ENST00000587471 187 ntBASIC0.03□□□□□ -2.4
KNTC1P50748 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC0.03□□□□□ -2.4
KNTC1P50748 AC004832.4-201ENST00000608952 331 ntBASIC0.03□□□□□ -2.4
KNTC1P50748 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.03□□□□□ -2.4
KNTC1P50748 AC073349.3-201ENST00000617616 186 ntBASIC0.03□□□□□ -2.4
KNTC1P50748 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.03□□□□□ -2.4
KNTC1P50748 Y_RNA.18-201ENST00000362461 102 ntBASIC0.02□□□□□ -2.41
KNTC1P50748 U3.9-201ENST00000363823 204 ntBASIC0.02□□□□□ -2.41
KNTC1P50748 RNU6-1317P-201ENST00000364582 104 ntBASIC0.02□□□□□ -2.41
KNTC1P50748 RNU6-1327P-201ENST00000365302 105 ntBASIC0.02□□□□□ -2.41
KNTC1P50748 RNU6-827P-201ENST00000365553 106 ntBASIC0.02□□□□□ -2.41
KNTC1P50748 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.02□□□□□ -2.41
KNTC1P50748 RNU6-877P-201ENST00000383868 107 ntBASIC0.02□□□□□ -2.41
KNTC1P50748 Y_RNA.552-201ENST00000384665 112 ntBASIC0.02□□□□□ -2.41
KNTC1P50748 RNA5SP109-201ENST00000391010 116 ntBASIC0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms