Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 MIR4498-201ENST00000577599 66 ntBASIC1.25□□□□□ -2.21
CASP4P49662 AC015688.6-201ENST00000577737 104 ntBASIC1.25□□□□□ -2.21
CASP4P49662 AC048344.4-201ENST00000619744 527 ntBASIC1.25□□□□□ -2.21
CASP4P49662 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.24□□□□□ -2.21
CASP4P49662 ZNF204P-201ENST00000416749 2397 ntBASIC1.24□□□□□ -2.21
CASP4P49662 SNORD50.1-201ENST00000362987 71 ntBASIC1.24□□□□□ -2.21
CASP4P49662 RNY3P3-201ENST00000363816 102 ntBASIC1.24□□□□□ -2.21
CASP4P49662 SNORD115-8-201ENST00000363856 82 ntBASIC1.24□□□□□ -2.21
CASP4P49662 SNORD115-38-201ENST00000365037 82 ntBASIC1.24□□□□□ -2.21
CASP4P49662 Y_RNA.372-201ENST00000365599 102 ntBASIC1.24□□□□□ -2.21
CASP4P49662 Y_RNA.373-201ENST00000365600 103 ntBASIC1.24□□□□□ -2.21
CASP4P49662 RNU6-245P-201ENST00000384020 107 ntBASIC1.24□□□□□ -2.21
CASP4P49662 RNU6-790P-201ENST00000384479 105 ntBASIC1.24□□□□□ -2.21
CASP4P49662 RNU6-939P-201ENST00000384634 107 ntBASIC1.24□□□□□ -2.21
CASP4P49662 RNU6-950P-201ENST00000384651 107 ntBASIC1.24□□□□□ -2.21
CASP4P49662 Y_RNA.615-201ENST00000410769 117 ntBASIC1.24□□□□□ -2.21
CASP4P49662 AC008134.1-201ENST00000420943 193 ntBASIC1.24□□□□□ -2.21
CASP4P49662 RPS27P16-201ENST00000425758 201 ntBASIC1.24□□□□□ -2.21
CASP4P49662 MTND3P21-201ENST00000433774 331 ntBASIC1.24□□□□□ -2.21
CASP4P49662 DAP3P1-201ENST00000441522 278 ntBASIC1.24□□□□□ -2.21
CASP4P49662 AC073910.1-201ENST00000445047 438 ntBASIC1.24□□□□□ -2.21
CASP4P49662 AC079354.2-201ENST00000453523 154 ntBASIC1.24□□□□□ -2.21
CASP4P49662 RPL31P58-201ENST00000469001 379 ntBASIC1.24□□□□□ -2.21
CASP4P49662 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.24□□□□□ -2.21
CASP4P49662 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.24□□□□□ -2.21
CASP4P49662 RNU6-1198P-201ENST00000516904 67 ntBASIC1.24□□□□□ -2.21
CASP4P49662 ZNF519P2-201ENST00000557032 169 ntBASIC1.24□□□□□ -2.21
CASP4P49662 AC080078.3-201ENST00000605407 463 ntBASIC1.24□□□□□ -2.21
CASP4P49662 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.24□□□□□ -2.21
CASP4P49662 AC006001.4-201ENST00000622243 395 ntBASIC1.24□□□□□ -2.21
CASP4P49662 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.24□□□□□ -2.21
CASP4P49662 AC091812.1-201ENST00000432235 1948 ntBASIC1.24□□□□□ -2.21
CASP4P49662 RNU6-451P-201ENST00000362921 107 ntBASIC1.23□□□□□ -2.21
CASP4P49662 Y_RNA.194-201ENST00000363985 102 ntBASIC1.23□□□□□ -2.21
CASP4P49662 SNORD115-32-201ENST00000364079 82 ntBASIC1.23□□□□□ -2.21
CASP4P49662 Y_RNA.256-201ENST00000364594 104 ntBASIC1.23□□□□□ -2.21
CASP4P49662 RNU6-534P-201ENST00000364877 106 ntBASIC1.23□□□□□ -2.21
CASP4P49662 RNU4-9P-201ENST00000364951 139 ntBASIC1.23□□□□□ -2.21
CASP4P49662 SNORA67.2-201ENST00000384300 149 ntBASIC1.23□□□□□ -2.21
CASP4P49662 EIF1P1-201ENST00000421436 341 ntBASIC1.23□□□□□ -2.21
CASP4P49662 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.23□□□□□ -2.21
CASP4P49662 PCMTD1P1-201ENST00000455560 355 ntBASIC1.23□□□□□ -2.21
CASP4P49662 RNU7-57P-201ENST00000459540 60 ntBASIC1.23□□□□□ -2.21
CASP4P49662 RPS26P45-201ENST00000471748 340 ntBASIC1.23□□□□□ -2.21
CASP4P49662 AL163540.1-201ENST00000485382 386 ntBASIC1.23□□□□□ -2.21
CASP4P49662 MTCO2P30-201ENST00000503662 364 ntBASIC1.23□□□□□ -2.21
CASP4P49662 AC005668.1-201ENST00000571142 476 ntBASIC1.23□□□□□ -2.21
CASP4P49662 AL359821.1-201ENST00000605519 182 ntBASIC1.23□□□□□ -2.21
CASP4P49662 AL138726.1-201ENST00000614873 333 ntBASIC1.23□□□□□ -2.21
CASP4P49662 AC095038.3-201ENST00000634439 195 ntBASIC1.23□□□□□ -2.21
CASP4P49662 MIR1321-201ENST00000637766 79 ntBASIC1.23□□□□□ -2.21
CASP4P49662 Y_RNA.151-201ENST00000363566 112 ntBASIC1.22□□□□□ -2.21
CASP4P49662 RNU6-95P-201ENST00000384697 107 ntBASIC1.22□□□□□ -2.21
CASP4P49662 RNU6-331P-201ENST00000384724 107 ntBASIC1.22□□□□□ -2.21
CASP4P49662 RNA5SP323-201ENST00000391094 133 ntBASIC1.22□□□□□ -2.21
CASP4P49662 RNU6-57P-201ENST00000411348 103 ntBASIC1.22□□□□□ -2.21
CASP4P49662 ZNF885P-201ENST00000420174 1098 ntBASIC1.22□□□□□ -2.21
CASP4P49662 AL591704.2-201ENST00000421658 181 ntBASIC1.22□□□□□ -2.21
CASP4P49662 AL135790.2-201ENST00000437701 267 ntBASIC1.22□□□□□ -2.21
CASP4P49662 MTCO3P18-201ENST00000440206 761 ntBASIC1.22□□□□□ -2.21
CASP4P49662 MTND2P22-201ENST00000444325 1033 ntBASIC1.22□□□□□ -2.21
CASP4P49662 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.22□□□□□ -2.21
CASP4P49662 RNU7-66P-201ENST00000459469 62 ntBASIC1.22□□□□□ -2.21
CASP4P49662 RPL30P7-201ENST00000479312 323 ntBASIC1.22□□□□□ -2.21
CASP4P49662 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC1.22□□□□□ -2.21
CASP4P49662 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.22□□□□□ -2.21
CASP4P49662 AC019176.1-201ENST00000518519 225 ntBASIC1.22□□□□□ -2.21
CASP4P49662 RAB11AP2-201ENST00000545905 639 ntBASIC1.22□□□□□ -2.21
CASP4P49662 POLR3GP2-201ENST00000588366 668 ntBASIC1.22□□□□□ -2.21
CASP4P49662 AP003465.2-201ENST00000602571 373 ntBASIC1.22□□□□□ -2.21
CASP4P49662 AC103591.3-201ENST00000608684 209 ntBASIC1.22□□□□□ -2.21
CASP4P49662 AL078604.3-201ENST00000615580 211 ntBASIC1.22□□□□□ -2.21
CASP4P49662 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.22□□□□□ -2.21
CASP4P49662 snoZ196.1-201ENST00000625269 89 ntBASIC1.22□□□□□ -2.21
CASP4P49662 AC099654.12-201ENST00000639868 649 ntBASIC1.22□□□□□ -2.21
CASP4P49662 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
CASP4P49662 Y_RNA.100-201ENST00000363141 102 ntBASIC1.21□□□□□ -2.22
CASP4P49662 RNU4-24P-201ENST00000364565 139 ntBASIC1.21□□□□□ -2.22
CASP4P49662 Y_RNA.338-201ENST00000365320 114 ntBASIC1.21□□□□□ -2.22
CASP4P49662 MIR194-1-201ENST00000384892 85 ntBASIC1.21□□□□□ -2.22
CASP4P49662 AL590002.1-201ENST00000406554 418 ntBASIC1.21□□□□□ -2.22
CASP4P49662 RPL23AP36-201ENST00000413895 458 ntBASIC1.21□□□□□ -2.22
CASP4P49662 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC1.21□□□□□ -2.22
CASP4P49662 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.21□□□□□ -2.22
CASP4P49662 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.21□□□□□ -2.22
CASP4P49662 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.21□□□□□ -2.22
CASP4P49662 RNU7-34P-201ENST00000459394 64 ntBASIC1.21□□□□□ -2.22
CASP4P49662 AC005840.1-201ENST00000498412 377 ntBASIC1.21□□□□□ -2.22
CASP4P49662 HMGN1P12-201ENST00000499125 195 ntBASIC1.21□□□□□ -2.22
CASP4P49662 RNU6-506P-201ENST00000516553 94 ntBASIC1.21□□□□□ -2.22
CASP4P49662 RNU6-256P-201ENST00000516747 97 ntBASIC1.21□□□□□ -2.22
CASP4P49662 MTND1P5-201ENST00000517906 940 ntBASIC1.21□□□□□ -2.22
CASP4P49662 SNORD11B-201ENST00000607707 90 ntBASIC1.21□□□□□ -2.22
CASP4P49662 MIR6078-201ENST00000611069 100 ntBASIC1.21□□□□□ -2.22
CASP4P49662 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.21□□□□□ -2.22
CASP4P49662 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.21□□□□□ -2.22
CASP4P49662 RNU6-1123P-201ENST00000362347 106 ntBASIC1.2□□□□□ -2.22
CASP4P49662 RNU6-1252P-201ENST00000363054 104 ntBASIC1.2□□□□□ -2.22
CASP4P49662 Y_RNA.135-201ENST00000363439 95 ntBASIC1.2□□□□□ -2.22
CASP4P49662 RNU6-417P-201ENST00000384712 107 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms