Protein–RNA interactions for Protein: P48443

RXRG, Retinoic acid receptor RXR-gamma, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRGP48443 RNU6-793P-201ENST00000384233 104 ntBASIC2.01□□□□□ -2.09
RXRGP48443 Y_RNA.524-201ENST00000384564 100 ntBASIC2.01□□□□□ -2.09
RXRGP48443 Y_RNA.561-201ENST00000384694 100 ntBASIC2.01□□□□□ -2.09
RXRGP48443 RNU6-159P-201ENST00000391080 106 ntBASIC2.01□□□□□ -2.09
RXRGP48443 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
RXRGP48443 MIR548F5-201ENST00000408421 86 ntBASIC2.01□□□□□ -2.09
RXRGP48443 RPL37P10-201ENST00000412884 288 ntBASIC2.01□□□□□ -2.09
RXRGP48443 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.01□□□□□ -2.09
RXRGP48443 AL021397.1-201ENST00000451806 248 ntBASIC2.01□□□□□ -2.09
RXRGP48443 AC010409.1-201ENST00000487382 476 ntBASIC2.01□□□□□ -2.09
RXRGP48443 Y_RNA.708-201ENST00000516950 96 ntBASIC2.01□□□□□ -2.09
RXRGP48443 AC027288.2-201ENST00000553028 243 ntBASIC2.01□□□□□ -2.09
RXRGP48443 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.01□□□□□ -2.09
RXRGP48443 AC018462.2-201ENST00000605375 395 ntBASIC2.01□□□□□ -2.09
RXRGP48443 AC103810.8-201ENST00000607347 118 ntBASIC2.01□□□□□ -2.09
RXRGP48443 AC022513.1-201ENST00000624512 117 ntBASIC2.01□□□□□ -2.09
RXRGP48443 snoU2-30.2-201ENST00000362805 70 ntBASIC2□□□□□ -2.09
RXRGP48443 U3.8-201ENST00000363675 217 ntBASIC2□□□□□ -2.09
RXRGP48443 Y_RNA.505-201ENST00000384489 102 ntBASIC2□□□□□ -2.09
RXRGP48443 RNU6-601P-201ENST00000384540 107 ntBASIC2□□□□□ -2.09
RXRGP48443 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2□□□□□ -2.09
RXRGP48443 RNA5SP323-201ENST00000391094 133 ntBASIC2□□□□□ -2.09
RXRGP48443 USP9YP16-201ENST00000430287 407 ntBASIC2□□□□□ -2.09
RXRGP48443 USP9YP23-201ENST00000455085 407 ntBASIC2□□□□□ -2.09
RXRGP48443 AC027575.1-201ENST00000481064 460 ntBASIC2□□□□□ -2.09
RXRGP48443 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2□□□□□ -2.09
RXRGP48443 RNA5SP458-201ENST00000516188 119 ntBASIC2□□□□□ -2.09
RXRGP48443 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2□□□□□ -2.09
RXRGP48443 AL121579.1-201ENST00000555129 305 ntBASIC2□□□□□ -2.09
RXRGP48443 HSBP1P1-201ENST00000555205 166 ntBASIC2□□□□□ -2.09
RXRGP48443 MIR3935-201ENST00000583472 104 ntBASIC2□□□□□ -2.09
RXRGP48443 AC005899.2-201ENST00000584353 90 ntBASIC2□□□□□ -2.09
RXRGP48443 MIR6845-201ENST00000613182 61 ntBASIC2□□□□□ -2.09
RXRGP48443 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2□□□□□ -2.09
RXRGP48443 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2□□□□□ -2.09
RXRGP48443 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.99□□□□□ -2.09
RXRGP48443 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.99□□□□□ -2.09
RXRGP48443 RNA5SP160-201ENST00000364866 120 ntBASIC1.99□□□□□ -2.09
RXRGP48443 MIR583-201ENST00000384846 75 ntBASIC1.99□□□□□ -2.09
RXRGP48443 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.99□□□□□ -2.09
RXRGP48443 MIR548K-201ENST00000408406 116 ntBASIC1.99□□□□□ -2.09
RXRGP48443 MIR1267-201ENST00000408723 78 ntBASIC1.99□□□□□ -2.09
RXRGP48443 RPL23AP50-201ENST00000434149 455 ntBASIC1.99□□□□□ -2.09
RXRGP48443 NDUFB4P10-201ENST00000452541 359 ntBASIC1.99□□□□□ -2.09
RXRGP48443 RPL31P58-201ENST00000469001 379 ntBASIC1.99□□□□□ -2.09
RXRGP48443 AC069439.1-201ENST00000494739 167 ntBASIC1.99□□□□□ -2.09
RXRGP48443 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.99□□□□□ -2.09
RXRGP48443 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.99□□□□□ -2.09
RXRGP48443 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.99□□□□□ -2.09
RXRGP48443 MIR5002-201ENST00000584713 97 ntBASIC1.99□□□□□ -2.09
RXRGP48443 AC012493.3-201ENST00000604494 112 ntBASIC1.99□□□□□ -2.09
RXRGP48443 AC084782.3-201ENST00000612282 578 ntBASIC1.99□□□□□ -2.09
RXRGP48443 AC126177.8-201ENST00000618339 1015 ntBASIC1.99□□□□□ -2.09
RXRGP48443 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.99□□□□□ -2.09
RXRGP48443 CASC19-280ENST00000642102 1351 ntBASIC1.98□□□□□ -2.09
RXRGP48443 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.98□□□□□ -2.09
RXRGP48443 RNU6-1059P-201ENST00000363752 98 ntBASIC1.98□□□□□ -2.09
RXRGP48443 RNU6-1240P-201ENST00000365155 104 ntBASIC1.98□□□□□ -2.09
RXRGP48443 Y_RNA.482-201ENST00000384377 111 ntBASIC1.98□□□□□ -2.09
RXRGP48443 MIR934-201ENST00000401241 83 ntBASIC1.98□□□□□ -2.09
RXRGP48443 RNU6-1050P-201ENST00000410388 107 ntBASIC1.98□□□□□ -2.09
RXRGP48443 AL139156.1-201ENST00000412785 841 ntBASIC1.98□□□□□ -2.09
RXRGP48443 CYCSP49-201ENST00000420810 319 ntBASIC1.98□□□□□ -2.09
RXRGP48443 AC099677.2-201ENST00000436385 175 ntBASIC1.98□□□□□ -2.09
RXRGP48443 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.98□□□□□ -2.09
RXRGP48443 MIR5695-201ENST00000579717 85 ntBASIC1.98□□□□□ -2.09
RXRGP48443 uc_338.5-201ENST00000611839 155 ntBASIC1.98□□□□□ -2.09
RXRGP48443 AC010999.1-201ENST00000611856 324 ntBASIC1.98□□□□□ -2.09
RXRGP48443 Y_RNA.783-201ENST00000613546 102 ntBASIC1.98□□□□□ -2.09
RXRGP48443 MIR338-201ENST00000636369 67 ntBASIC1.98□□□□□ -2.09
RXRGP48443 AC099654.5-201ENST00000636479 350 ntBASIC1.98□□□□□ -2.09
RXRGP48443 MTND4P12-201ENST00000498999 1377 ntBASIC1.98□□□□□ -2.09
RXRGP48443 RNU6-727P-201ENST00000363592 107 ntBASIC1.97□□□□□ -2.09
RXRGP48443 Y_RNA.160-201ENST00000363677 92 ntBASIC1.97□□□□□ -2.09
RXRGP48443 RNU6-360P-201ENST00000390944 104 ntBASIC1.97□□□□□ -2.09
RXRGP48443 RNU6-876P-201ENST00000391295 104 ntBASIC1.97□□□□□ -2.09
RXRGP48443 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.97□□□□□ -2.09
RXRGP48443 MTCYBP10-201ENST00000424905 650 ntBASIC1.97□□□□□ -2.09
RXRGP48443 AL445305.1-201ENST00000432577 575 ntBASIC1.97□□□□□ -2.09
RXRGP48443 UBE2V1P7-201ENST00000446395 340 ntBASIC1.97□□□□□ -2.09
RXRGP48443 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.97□□□□□ -2.09
RXRGP48443 snoU13.9-201ENST00000458927 103 ntBASIC1.97□□□□□ -2.09
RXRGP48443 RNU6-221P-201ENST00000459541 99 ntBASIC1.97□□□□□ -2.09
RXRGP48443 AP000870.1-201ENST00000472927 406 ntBASIC1.97□□□□□ -2.09
RXRGP48443 RNU6-1114P-201ENST00000516022 107 ntBASIC1.97□□□□□ -2.09
RXRGP48443 AC084364.2-201ENST00000546924 395 ntBASIC1.97□□□□□ -2.09
RXRGP48443 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.97□□□□□ -2.09
RXRGP48443 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.97□□□□□ -2.09
RXRGP48443 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
RXRGP48443 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.96□□□□□ -2.09
RXRGP48443 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
RXRGP48443 RNU6-842P-201ENST00000384269 107 ntBASIC1.96□□□□□ -2.1
RXRGP48443 SNORA67.2-201ENST00000384300 149 ntBASIC1.96□□□□□ -2.1
RXRGP48443 Y_RNA.594-201ENST00000410373 140 ntBASIC1.96□□□□□ -2.1
RXRGP48443 COX6CP10-201ENST00000416832 224 ntBASIC1.96□□□□□ -2.1
RXRGP48443 HSPE1P9-201ENST00000440046 311 ntBASIC1.96□□□□□ -2.1
RXRGP48443 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.96□□□□□ -2.1
RXRGP48443 RN7SL274P-201ENST00000492268 272 ntBASIC1.96□□□□□ -2.1
RXRGP48443 AC026782.1-201ENST00000512952 449 ntBASIC1.96□□□□□ -2.1
RXRGP48443 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms