Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 AC141557.1-201ENST00000540982 400 ntBASIC3.72□□□□□ -1.81
CHRNA4P43681 EIF4A1P12-201ENST00000551910 141 ntBASIC3.72□□□□□ -1.81
CHRNA4P43681 AL451007.1-201ENST00000595491 289 ntBASIC3.72□□□□□ -1.81
CHRNA4P43681 AC024220.1-201ENST00000603675 484 ntBASIC3.72□□□□□ -1.81
CHRNA4P43681 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CHRNA4P43681 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
CHRNA4P43681 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CHRNA4P43681 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.72□□□□□ -1.81
CHRNA4P43681 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.72□□□□□ -1.81
CHRNA4P43681 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CHRNA4P43681 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.72□□□□□ -1.81
CHRNA4P43681 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.72□□□□□ -1.81
CHRNA4P43681 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.72□□□□□ -1.81
CHRNA4P43681 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
CHRNA4P43681 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CHRNA4P43681 Y_RNA.198-201ENST00000364013 98 ntBASIC3.71□□□□□ -1.82
CHRNA4P43681 RNU6-1276P-201ENST00000365372 104 ntBASIC3.71□□□□□ -1.82
CHRNA4P43681 AC007064.1-201ENST00000412238 351 ntBASIC3.71□□□□□ -1.82
CHRNA4P43681 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.71□□□□□ -1.82
CHRNA4P43681 HMGN2P7-201ENST00000456186 273 ntBASIC3.71□□□□□ -1.82
CHRNA4P43681 snoU13.24-201ENST00000458998 104 ntBASIC3.71□□□□□ -1.82
CHRNA4P43681 AC010285.1-201ENST00000470580 392 ntBASIC3.71□□□□□ -1.82
CHRNA4P43681 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.71□□□□□ -1.82
CHRNA4P43681 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.71□□□□□ -1.82
CHRNA4P43681 MIR5187-201ENST00000583479 76 ntBASIC3.71□□□□□ -1.82
CHRNA4P43681 AC110741.2-201ENST00000605278 268 ntBASIC3.71□□□□□ -1.82
CHRNA4P43681 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
CHRNA4P43681 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.71□□□□□ -1.82
CHRNA4P43681 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.71□□□□□ -1.82
CHRNA4P43681 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.71□□□□□ -1.82
CHRNA4P43681 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
CHRNA4P43681 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.7□□□□□ -1.82
CHRNA4P43681 AC007656.2-201ENST00000624902 4547 ntBASIC3.7□□□□□ -1.82
CHRNA4P43681 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.7□□□□□ -1.82
CHRNA4P43681 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CHRNA4P43681 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CHRNA4P43681 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CHRNA4P43681 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CHRNA4P43681 Y_RNA.366-201ENST00000365540 102 ntBASIC3.7□□□□□ -1.82
CHRNA4P43681 SNORA18.2-201ENST00000383865 132 ntBASIC3.7□□□□□ -1.82
CHRNA4P43681 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC3.7□□□□□ -1.82
CHRNA4P43681 AL445584.1-201ENST00000431451 330 ntBASIC3.7□□□□□ -1.82
CHRNA4P43681 RPL23AP83-201ENST00000434984 473 ntBASIC3.7□□□□□ -1.82
CHRNA4P43681 AL121890.1-201ENST00000435457 205 ntBASIC3.7□□□□□ -1.82
CHRNA4P43681 AC083906.5-201ENST00000503722 328 ntBASIC3.7□□□□□ -1.82
CHRNA4P43681 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.7□□□□□ -1.82
CHRNA4P43681 RNU6-126P-201ENST00000516685 103 ntBASIC3.7□□□□□ -1.82
CHRNA4P43681 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.7□□□□□ -1.82
CHRNA4P43681 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.7□□□□□ -1.82
CHRNA4P43681 AP000553.6-201ENST00000641242 118 ntBASIC3.7□□□□□ -1.82
CHRNA4P43681 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
CHRNA4P43681 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CHRNA4P43681 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
CHRNA4P43681 AC080128.1-201ENST00000474389 1917 ntBASIC3.7□□□□□ -1.82
CHRNA4P43681 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
CHRNA4P43681 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
CHRNA4P43681 RNU6-1125P-201ENST00000363601 107 ntBASIC3.69□□□□□ -1.82
CHRNA4P43681 RNY1P1-201ENST00000364372 112 ntBASIC3.69□□□□□ -1.82
CHRNA4P43681 RNU6-787P-201ENST00000384032 107 ntBASIC3.69□□□□□ -1.82
CHRNA4P43681 RNU6-242P-201ENST00000384359 107 ntBASIC3.69□□□□□ -1.82
CHRNA4P43681 MIR200C-201ENST00000384980 68 ntBASIC3.69□□□□□ -1.82
CHRNA4P43681 AL355796.1-201ENST00000406706 323 ntBASIC3.69□□□□□ -1.82
CHRNA4P43681 SNORA57.3-201ENST00000411095 141 ntBASIC3.69□□□□□ -1.82
CHRNA4P43681 CYCSP19-201ENST00000411715 316 ntBASIC3.69□□□□□ -1.82
CHRNA4P43681 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.69□□□□□ -1.82
CHRNA4P43681 RPS26P55-201ENST00000471178 356 ntBASIC3.69□□□□□ -1.82
CHRNA4P43681 RNU6-581P-201ENST00000516214 105 ntBASIC3.69□□□□□ -1.82
CHRNA4P43681 RNU2-44P-201ENST00000516795 194 ntBASIC3.69□□□□□ -1.82
CHRNA4P43681 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.69□□□□□ -1.82
CHRNA4P43681 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
CHRNA4P43681 AL353746.1-201ENST00000566293 6881 ntBASIC3.69□□□□□ -1.82
CHRNA4P43681 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
CHRNA4P43681 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
CHRNA4P43681 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
CHRNA4P43681 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
CHRNA4P43681 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CHRNA4P43681 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
CHRNA4P43681 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CHRNA4P43681 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.68□□□□□ -1.82
CHRNA4P43681 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.68□□□□□ -1.82
CHRNA4P43681 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CHRNA4P43681 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CHRNA4P43681 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
CHRNA4P43681 RNU6-600P-201ENST00000362524 99 ntBASIC3.68□□□□□ -1.82
CHRNA4P43681 Y_RNA.66-201ENST00000362862 102 ntBASIC3.68□□□□□ -1.82
CHRNA4P43681 RNA5SP51-201ENST00000364750 119 ntBASIC3.68□□□□□ -1.82
CHRNA4P43681 RNU6-283P-201ENST00000364788 107 ntBASIC3.68□□□□□ -1.82
CHRNA4P43681 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.68□□□□□ -1.82
CHRNA4P43681 TOMM22P1-201ENST00000418578 312 ntBASIC3.68□□□□□ -1.82
CHRNA4P43681 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC3.68□□□□□ -1.82
CHRNA4P43681 RN7SL542P-201ENST00000467147 294 ntBASIC3.68□□□□□ -1.82
CHRNA4P43681 AC078918.1-201ENST00000498515 228 ntBASIC3.68□□□□□ -1.82
CHRNA4P43681 RNU6-857P-201ENST00000515893 110 ntBASIC3.68□□□□□ -1.82
CHRNA4P43681 RNU6-1282P-201ENST00000516735 96 ntBASIC3.68□□□□□ -1.82
CHRNA4P43681 RNU1-45P-201ENST00000517191 141 ntBASIC3.68□□□□□ -1.82
CHRNA4P43681 AC084364.2-201ENST00000546924 395 ntBASIC3.68□□□□□ -1.82
CHRNA4P43681 AC019288.1-201ENST00000557918 224 ntBASIC3.68□□□□□ -1.82
CHRNA4P43681 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.68□□□□□ -1.82
CHRNA4P43681 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.68□□□□□ -1.82
CHRNA4P43681 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms