Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.06□□□□□ -2.08
APOBEC1P41238 AC233702.2-202ENST00000562547 291 ntBASIC2.06□□□□□ -2.08
APOBEC1P41238 RPS29P30-201ENST00000600975 111 ntBASIC2.06□□□□□ -2.08
APOBEC1P41238 SNORD58B-201ENST00000607313 66 ntBASIC2.06□□□□□ -2.08
APOBEC1P41238 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.06□□□□□ -2.08
APOBEC1P41238 ZNF72P-201ENST00000425869 1908 ntBASIC2.06□□□□□ -2.08
APOBEC1P41238 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.06□□□□□ -2.08
APOBEC1P41238 AC007336.1-201ENST00000576365 3828 ntBASIC2.06□□□□□ -2.08
APOBEC1P41238 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
APOBEC1P41238 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
APOBEC1P41238 MIRLET7G-201ENST00000362280 84 ntBASIC2.05□□□□□ -2.08
APOBEC1P41238 Y_RNA.80-201ENST00000362996 102 ntBASIC2.05□□□□□ -2.08
APOBEC1P41238 Y_RNA.148-201ENST00000363557 117 ntBASIC2.05□□□□□ -2.08
APOBEC1P41238 Y_RNA.415-201ENST00000384012 112 ntBASIC2.05□□□□□ -2.08
APOBEC1P41238 Y_RNA.424-201ENST00000384063 103 ntBASIC2.05□□□□□ -2.08
APOBEC1P41238 Y_RNA.485-201ENST00000384395 102 ntBASIC2.05□□□□□ -2.08
APOBEC1P41238 MIR29C-201ENST00000385231 88 ntBASIC2.05□□□□□ -2.08
APOBEC1P41238 SNORA40.19-201ENST00000390846 128 ntBASIC2.05□□□□□ -2.08
APOBEC1P41238 MIR1262-201ENST00000408276 93 ntBASIC2.05□□□□□ -2.08
APOBEC1P41238 UQCRBP2-201ENST00000447827 297 ntBASIC2.05□□□□□ -2.08
APOBEC1P41238 NDUFB4P10-201ENST00000452541 359 ntBASIC2.05□□□□□ -2.08
APOBEC1P41238 AC074133.1-201ENST00000515696 183 ntBASIC2.05□□□□□ -2.08
APOBEC1P41238 RNU6-948P-201ENST00000516374 107 ntBASIC2.05□□□□□ -2.08
APOBEC1P41238 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.05□□□□□ -2.08
APOBEC1P41238 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.05□□□□□ -2.08
APOBEC1P41238 AC022202.1-201ENST00000613515 211 ntBASIC2.05□□□□□ -2.08
APOBEC1P41238 IGHVIII-44-202ENST00000636235 289 ntBASIC2.05□□□□□ -2.08
APOBEC1P41238 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
APOBEC1P41238 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
APOBEC1P41238 AC005336.3-201ENST00000623833 2679 ntBASIC2.04□□□□□ -2.08
APOBEC1P41238 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
APOBEC1P41238 RNA5SP289-201ENST00000362332 137 ntBASIC2.04□□□□□ -2.08
APOBEC1P41238 RNU4-82P-201ENST00000362443 140 ntBASIC2.04□□□□□ -2.08
APOBEC1P41238 SNORD14.1-201ENST00000365609 90 ntBASIC2.04□□□□□ -2.08
APOBEC1P41238 RNU6-160P-201ENST00000384591 107 ntBASIC2.04□□□□□ -2.08
APOBEC1P41238 MIR524-201ENST00000385242 87 ntBASIC2.04□□□□□ -2.08
APOBEC1P41238 SNORD78.2-201ENST00000391076 69 ntBASIC2.04□□□□□ -2.08
APOBEC1P41238 MRPL42P3-201ENST00000401492 326 ntBASIC2.04□□□□□ -2.08
APOBEC1P41238 RNA5SP504-201ENST00000410676 117 ntBASIC2.04□□□□□ -2.08
APOBEC1P41238 AC018634.1-201ENST00000437554 401 ntBASIC2.04□□□□□ -2.08
APOBEC1P41238 AC011753.1-201ENST00000451001 220 ntBASIC2.04□□□□□ -2.08
APOBEC1P41238 AC112492.4-201ENST00000456549 352 ntBASIC2.04□□□□□ -2.08
APOBEC1P41238 AC093852.1-201ENST00000503587 266 ntBASIC2.04□□□□□ -2.08
APOBEC1P41238 RNU2-34P-201ENST00000516534 121 ntBASIC2.04□□□□□ -2.08
APOBEC1P41238 AC087441.2-201ENST00000529141 262 ntBASIC2.04□□□□□ -2.08
APOBEC1P41238 AC245884.12-201ENST00000615364 59 ntBASIC2.04□□□□□ -2.08
APOBEC1P41238 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC2.04□□□□□ -2.08
APOBEC1P41238 AC130454.1-201ENST00000622948 401 ntBASIC2.04□□□□□ -2.08
APOBEC1P41238 AC009487.4-201ENST00000624969 3585 ntBASIC2.04□□□□□ -2.08
APOBEC1P41238 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
APOBEC1P41238 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
APOBEC1P41238 LINC02555-201ENST00000563933 1951 ntBASIC2.03□□□□□ -2.08
APOBEC1P41238 AC091812.1-201ENST00000432235 1948 ntBASIC2.03□□□□□ -2.08
APOBEC1P41238 SNORD115-3-201ENST00000363100 82 ntBASIC2.03□□□□□ -2.08
APOBEC1P41238 SNORA63-201ENST00000363450 132 ntBASIC2.03□□□□□ -2.08
APOBEC1P41238 U3.8-201ENST00000363675 217 ntBASIC2.03□□□□□ -2.08
APOBEC1P41238 SNORA3A-201ENST00000364113 130 ntBASIC2.03□□□□□ -2.08
APOBEC1P41238 Y_RNA.216-201ENST00000364205 93 ntBASIC2.03□□□□□ -2.08
APOBEC1P41238 SNORD87-201ENST00000364849 89 ntBASIC2.03□□□□□ -2.08
APOBEC1P41238 XGY1-201ENST00000381172 446 ntBASIC2.03□□□□□ -2.08
APOBEC1P41238 RNU6-975P-201ENST00000384296 105 ntBASIC2.03□□□□□ -2.08
APOBEC1P41238 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
APOBEC1P41238 RNU4-53P-201ENST00000410828 140 ntBASIC2.03□□□□□ -2.08
APOBEC1P41238 AC139712.2-201ENST00000424302 339 ntBASIC2.03□□□□□ -2.08
APOBEC1P41238 FCF1P4-201ENST00000448326 183 ntBASIC2.03□□□□□ -2.08
APOBEC1P41238 RNU7-57P-201ENST00000459540 60 ntBASIC2.03□□□□□ -2.08
APOBEC1P41238 RNA5SP200-201ENST00000516360 103 ntBASIC2.03□□□□□ -2.08
APOBEC1P41238 RNU6-107P-201ENST00000516643 102 ntBASIC2.03□□□□□ -2.08
APOBEC1P41238 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.03□□□□□ -2.08
APOBEC1P41238 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.03□□□□□ -2.08
APOBEC1P41238 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.03□□□□□ -2.08
APOBEC1P41238 AC016925.2-201ENST00000605108 242 ntBASIC2.03□□□□□ -2.08
APOBEC1P41238 AC009831.4-201ENST00000620744 325 ntBASIC2.03□□□□□ -2.08
APOBEC1P41238 MIR6132-201ENST00000622083 109 ntBASIC2.03□□□□□ -2.08
APOBEC1P41238 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
APOBEC1P41238 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.02□□□□□ -2.09
APOBEC1P41238 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.02□□□□□ -2.09
APOBEC1P41238 RNU6-418P-201ENST00000384035 107 ntBASIC2.02□□□□□ -2.09
APOBEC1P41238 SNORA51.11-201ENST00000384442 131 ntBASIC2.02□□□□□ -2.09
APOBEC1P41238 Y_RNA.498-201ENST00000384460 102 ntBASIC2.02□□□□□ -2.09
APOBEC1P41238 Y_RNA.500-201ENST00000384466 111 ntBASIC2.02□□□□□ -2.09
APOBEC1P41238 SNORA48.3-201ENST00000391081 134 ntBASIC2.02□□□□□ -2.09
APOBEC1P41238 MTCO1P44-201ENST00000441935 243 ntBASIC2.02□□□□□ -2.09
APOBEC1P41238 AL357134.1-201ENST00000445848 426 ntBASIC2.02□□□□□ -2.09
APOBEC1P41238 AC010531.2-201ENST00000465012 153 ntBASIC2.02□□□□□ -2.09
APOBEC1P41238 UBE2DNL-203ENST00000474922 222 ntBASIC2.02□□□□□ -2.09
APOBEC1P41238 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.02□□□□□ -2.09
APOBEC1P41238 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.02□□□□□ -2.09
APOBEC1P41238 AC067942.3-201ENST00000512025 362 ntBASIC2.02□□□□□ -2.09
APOBEC1P41238 SNORA40.9-201ENST00000515895 93 ntBASIC2.02□□□□□ -2.09
APOBEC1P41238 Y_RNA.721-201ENST00000517207 102 ntBASIC2.02□□□□□ -2.09
APOBEC1P41238 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.02□□□□□ -2.09
APOBEC1P41238 AC040926.1-201ENST00000530195 238 ntBASIC2.02□□□□□ -2.09
APOBEC1P41238 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.02□□□□□ -2.09
APOBEC1P41238 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.02□□□□□ -2.09
APOBEC1P41238 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.02□□□□□ -2.09
APOBEC1P41238 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.02□□□□□ -2.09
APOBEC1P41238 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.02□□□□□ -2.09
APOBEC1P41238 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
APOBEC1P41238 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 132.5 ms