Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 Z99289.3-201ENST00000605586 594 ntBASIC-0.74□□□□□ -2.53
SNCAP37840 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC-0.75□□□□□ -2.53
SNCAP37840 Y_RNA.168-201ENST00000363740 102 ntBASIC-0.75□□□□□ -2.53
SNCAP37840 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.75□□□□□ -2.53
SNCAP37840 RNU6-46P-201ENST00000383860 107 ntBASIC-0.75□□□□□ -2.53
SNCAP37840 RNU6-946P-201ENST00000383878 107 ntBASIC-0.75□□□□□ -2.53
SNCAP37840 RNU6-1179P-201ENST00000384667 107 ntBASIC-0.75□□□□□ -2.53
SNCAP37840 SNORA26-201ENST00000391286 122 ntBASIC-0.75□□□□□ -2.53
SNCAP37840 AL049545.1-201ENST00000401856 572 ntBASIC-0.75□□□□□ -2.53
SNCAP37840 RNU6-284P-201ENST00000411105 106 ntBASIC-0.75□□□□□ -2.53
SNCAP37840 MTCO1P17-201ENST00000411522 491 ntBASIC-0.75□□□□□ -2.53
SNCAP37840 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC-0.75□□□□□ -2.53
SNCAP37840 AC013470.1-201ENST00000453438 462 ntBASIC-0.75□□□□□ -2.53
SNCAP37840 RPL17P19-201ENST00000489069 552 ntBASIC-0.75□□□□□ -2.53
SNCAP37840 RNU6-63P-201ENST00000516690 95 ntBASIC-0.75□□□□□ -2.53
SNCAP37840 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC-0.75□□□□□ -2.53
SNCAP37840 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC-0.75□□□□□ -2.53
SNCAP37840 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC-0.75□□□□□ -2.53
SNCAP37840 AC069545.1-201ENST00000605671 358 ntBASIC-0.75□□□□□ -2.53
SNCAP37840 AL355073.2-201ENST00000612106 557 ntBASIC-0.75□□□□□ -2.53
SNCAP37840 AC023158.2-201ENST00000614876 543 ntBASIC-0.75□□□□□ -2.53
SNCAP37840 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC-0.75□□□□□ -2.53
SNCAP37840 FRG1KP-201ENST00000623592 341 ntBASIC-0.75□□□□□ -2.53
SNCAP37840 RNA5SP257-201ENST00000363023 116 ntBASIC-0.76□□□□□ -2.53
SNCAP37840 RNU4-30P-201ENST00000410245 143 ntBASIC-0.76□□□□□ -2.53
SNCAP37840 RNU6-613P-201ENST00000410412 108 ntBASIC-0.76□□□□□ -2.53
SNCAP37840 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC-0.76□□□□□ -2.53
SNCAP37840 RNU7-94P-201ENST00000459576 63 ntBASIC-0.76□□□□□ -2.53
SNCAP37840 AC016632.1-201ENST00000503994 196 ntBASIC-0.76□□□□□ -2.53
SNCAP37840 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.76□□□□□ -2.53
SNCAP37840 RNA5SP285-201ENST00000516619 119 ntBASIC-0.76□□□□□ -2.53
SNCAP37840 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC-0.76□□□□□ -2.53
SNCAP37840 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC-0.76□□□□□ -2.53
SNCAP37840 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC-0.76□□□□□ -2.53
SNCAP37840 AC240442.1-201ENST00000616055 283 ntBASIC-0.76□□□□□ -2.53
SNCAP37840 AL008636.1-201ENST00000625038 1018 ntBASIC-0.76□□□□□ -2.53
SNCAP37840 RNA5SP163-201ENST00000410304 99 ntBASIC-0.77□□□□□ -2.53
SNCAP37840 AL031779.1-201ENST00000415663 330 ntBASIC-0.77□□□□□ -2.53
SNCAP37840 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC-0.77□□□□□ -2.53
SNCAP37840 AL953862.1-201ENST00000423016 168 ntBASIC-0.77□□□□□ -2.53
SNCAP37840 HMGN2P22-201ENST00000427588 175 ntBASIC-0.77□□□□□ -2.53
SNCAP37840 AC015818.7-201ENST00000428754 109 ntBASIC-0.77□□□□□ -2.53
SNCAP37840 AC087499.7-201ENST00000441958 109 ntBASIC-0.77□□□□□ -2.53
SNCAP37840 PAXBP1P1-201ENST00000449315 447 ntBASIC-0.77□□□□□ -2.53
SNCAP37840 RNU6-180P-201ENST00000516697 61 ntBASIC-0.77□□□□□ -2.53
SNCAP37840 AC010376.1-201ENST00000522101 334 ntBASIC-0.77□□□□□ -2.53
SNCAP37840 AC026616.1-201ENST00000523157 525 ntBASIC-0.77□□□□□ -2.53
SNCAP37840 AP002453.2-201ENST00000533503 320 ntBASIC-0.77□□□□□ -2.53
SNCAP37840 AC027288.2-201ENST00000553028 243 ntBASIC-0.77□□□□□ -2.53
SNCAP37840 AC104072.1-201ENST00000568817 668 ntBASIC-0.77□□□□□ -2.53
SNCAP37840 U3.4-201ENST00000363352 213 ntBASIC-0.78□□□□□ -2.53
SNCAP37840 RNU6-777P-201ENST00000364265 104 ntBASIC-0.78□□□□□ -2.53
SNCAP37840 SNORD32A-201ENST00000364805 84 ntBASIC-0.78□□□□□ -2.53
SNCAP37840 RNU6-692P-201ENST00000384496 107 ntBASIC-0.78□□□□□ -2.53
SNCAP37840 MIR578-201ENST00000384828 96 ntBASIC-0.78□□□□□ -2.53
SNCAP37840 AL133396.1-201ENST00000432048 687 ntBASIC-0.78□□□□□ -2.53
SNCAP37840 RPS29P8-201ENST00000445109 171 ntBASIC-0.78□□□□□ -2.53
SNCAP37840 AC087499.4-201ENST00000448505 178 ntBASIC-0.78□□□□□ -2.53
SNCAP37840 MTND1P17-201ENST00000448961 204 ntBASIC-0.78□□□□□ -2.53
SNCAP37840 AC079354.2-201ENST00000453523 154 ntBASIC-0.78□□□□□ -2.53
SNCAP37840 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC-0.78□□□□□ -2.53
SNCAP37840 RNY4P37-201ENST00000516225 96 ntBASIC-0.78□□□□□ -2.53
SNCAP37840 RNU6-567P-201ENST00000516746 107 ntBASIC-0.78□□□□□ -2.53
SNCAP37840 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC-0.78□□□□□ -2.53
SNCAP37840 MIR7107-201ENST00000611489 80 ntBASIC-0.78□□□□□ -2.53
SNCAP37840 AL591926.4-201ENST00000616895 298 ntBASIC-0.78□□□□□ -2.53
SNCAP37840 MIR6779-201ENST00000617283 64 ntBASIC-0.78□□□□□ -2.53
SNCAP37840 AC006504.8-201ENST00000621046 635 ntBASIC-0.78□□□□□ -2.53
SNCAP37840 MPP6-209ENST00000625307 126 ntTSL 5 BASIC-0.78□□□□□ -2.53
SNCAP37840 MIR6759-201ENST00000638110 65 ntBASIC-0.78□□□□□ -2.53
SNCAP37840 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC-0.78□□□□□ -2.53
SNCAP37840 RNU6-960P-201ENST00000364056 120 ntBASIC-0.79□□□□□ -2.54
SNCAP37840 RNU5E-6P-201ENST00000365574 115 ntBASIC-0.79□□□□□ -2.54
SNCAP37840 RNU2-3P-201ENST00000410144 191 ntBASIC-0.79□□□□□ -2.54
SNCAP37840 MTND4LP11-201ENST00000422184 280 ntBASIC-0.79□□□□□ -2.54
SNCAP37840 DEFB130D-201ENST00000426866 237 ntBASIC-0.79□□□□□ -2.54
SNCAP37840 SNRPGP7-201ENST00000469016 106 ntBASIC-0.79□□□□□ -2.54
SNCAP37840 RNU6-1278P-201ENST00000516130 107 ntBASIC-0.79□□□□□ -2.54
SNCAP37840 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC-0.79□□□□□ -2.54
SNCAP37840 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC-0.79□□□□□ -2.54
SNCAP37840 AC246785.4-201ENST00000605374 287 ntBASIC-0.79□□□□□ -2.54
SNCAP37840 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC-0.79□□□□□ -2.54
SNCAP37840 RNU6-511P-201ENST00000363496 107 ntBASIC-0.8□□□□□ -2.54
SNCAP37840 RNA5SP48-201ENST00000363969 126 ntBASIC-0.8□□□□□ -2.54
SNCAP37840 AL136310.1-201ENST00000404926 654 ntBASIC-0.8□□□□□ -2.54
SNCAP37840 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC-0.8□□□□□ -2.54
SNCAP37840 RPL17P35-201ENST00000432217 549 ntBASIC-0.8□□□□□ -2.54
SNCAP37840 AL360271.2-201ENST00000447710 161 ntBASIC-0.8□□□□□ -2.54
SNCAP37840 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC-0.8□□□□□ -2.54
SNCAP37840 RPL39P34-201ENST00000477141 156 ntBASIC-0.8□□□□□ -2.54
SNCAP37840 AC079395.1-201ENST00000510981 262 ntBASIC-0.8□□□□□ -2.54
SNCAP37840 AC025647.1-201ENST00000517879 253 ntBASIC-0.8□□□□□ -2.54
SNCAP37840 AP001372.4-201ENST00000524889 472 ntBASIC-0.8□□□□□ -2.54
SNCAP37840 AC133485.4-201ENST00000561835 220 ntBASIC-0.8□□□□□ -2.54
SNCAP37840 AC090897.1-201ENST00000580909 226 ntBASIC-0.8□□□□□ -2.54
SNCAP37840 AC100830.2-201ENST00000581636 240 ntBASIC-0.8□□□□□ -2.54
SNCAP37840 VN1R87P-201ENST00000596706 487 ntBASIC-0.8□□□□□ -2.54
SNCAP37840 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC-0.8□□□□□ -2.54
SNCAP37840 AL359547.2-201ENST00000615810 418 ntBASIC-0.8□□□□□ -2.54
SNCAP37840 AL136221.1-201ENST00000621449 509 ntBASIC-0.8□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 130.6 ms