Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
KRT9P35527 Y_RNA.2-201ENST00000362330 96 ntBASIC2.3□□□□□ -2.04
KRT9P35527 RNU6-1115P-201ENST00000362490 106 ntBASIC2.3□□□□□ -2.04
KRT9P35527 RNU6-490P-201ENST00000362985 107 ntBASIC2.3□□□□□ -2.04
KRT9P35527 RNU6-1059P-201ENST00000363752 98 ntBASIC2.3□□□□□ -2.04
KRT9P35527 RNA5SP493-201ENST00000364115 91 ntBASIC2.3□□□□□ -2.04
KRT9P35527 SNORD114-6-201ENST00000364393 72 ntBASIC2.3□□□□□ -2.04
KRT9P35527 Y_RNA.364-201ENST00000365532 101 ntBASIC2.3□□□□□ -2.04
KRT9P35527 Y_RNA.404-201ENST00000383978 102 ntBASIC2.3□□□□□ -2.04
KRT9P35527 RNU4-52P-201ENST00000384209 138 ntBASIC2.3□□□□□ -2.04
KRT9P35527 Y_RNA.463-201ENST00000384271 102 ntBASIC2.3□□□□□ -2.04
KRT9P35527 Y_RNA.473-201ENST00000384333 102 ntBASIC2.3□□□□□ -2.04
KRT9P35527 MIR487A-201ENST00000385009 80 ntBASIC2.3□□□□□ -2.04
KRT9P35527 Y_RNA.605-201ENST00000410577 105 ntBASIC2.3□□□□□ -2.04
KRT9P35527 AL356379.1-201ENST00000414105 126 ntBASIC2.3□□□□□ -2.04
KRT9P35527 MCFD2P1-201ENST00000417812 300 ntBASIC2.3□□□□□ -2.04
KRT9P35527 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.3□□□□□ -2.04
KRT9P35527 RPL23AP50-201ENST00000434149 455 ntBASIC2.3□□□□□ -2.04
KRT9P35527 Z82188.1-201ENST00000436709 154 ntBASIC2.3□□□□□ -2.04
KRT9P35527 AC004386.2-201ENST00000441858 148 ntBASIC2.3□□□□□ -2.04
KRT9P35527 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.3□□□□□ -2.04
KRT9P35527 SCARNA16.3-201ENST00000516595 184 ntBASIC2.3□□□□□ -2.04
KRT9P35527 RNU6-307P-201ENST00000516743 106 ntBASIC2.3□□□□□ -2.04
KRT9P35527 RNU6-1137P-201ENST00000517073 99 ntBASIC2.3□□□□□ -2.04
KRT9P35527 AC005014.2-201ENST00000607795 599 ntBASIC2.3□□□□□ -2.04
KRT9P35527 TCL6_2.1-201ENST00000615162 119 ntBASIC2.3□□□□□ -2.04
KRT9P35527 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.3□□□□□ -2.04
KRT9P35527 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.3□□□□□ -2.04
KRT9P35527 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.29□□□□□ -2.04
KRT9P35527 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
KRT9P35527 MIR340-201ENST00000362125 95 ntBASIC2.29□□□□□ -2.04
KRT9P35527 Y_RNA.252-201ENST00000364556 101 ntBASIC2.29□□□□□ -2.04
KRT9P35527 RNA5SP138-201ENST00000365098 114 ntBASIC2.29□□□□□ -2.04
KRT9P35527 RNU6-596P-201ENST00000365395 98 ntBASIC2.29□□□□□ -2.04
KRT9P35527 Y_RNA.428-201ENST00000384078 102 ntBASIC2.29□□□□□ -2.04
KRT9P35527 SNORA11.4-201ENST00000408823 129 ntBASIC2.29□□□□□ -2.04
KRT9P35527 AC139712.2-201ENST00000424302 339 ntBASIC2.29□□□□□ -2.04
KRT9P35527 USMG5P1-201ENST00000425964 177 ntBASIC2.29□□□□□ -2.04
KRT9P35527 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.29□□□□□ -2.04
KRT9P35527 USP9YP30-201ENST00000430729 455 ntBASIC2.29□□□□□ -2.04
KRT9P35527 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.29□□□□□ -2.04
KRT9P35527 AL121890.1-201ENST00000435457 205 ntBASIC2.29□□□□□ -2.04
KRT9P35527 RPL23AP3-201ENST00000453844 468 ntBASIC2.29□□□□□ -2.04
KRT9P35527 SNORD5.1-201ENST00000458800 75 ntBASIC2.29□□□□□ -2.04
KRT9P35527 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.29□□□□□ -2.04
KRT9P35527 RNU6-470P-201ENST00000515954 104 ntBASIC2.29□□□□□ -2.04
KRT9P35527 RNU6-764P-201ENST00000516396 105 ntBASIC2.29□□□□□ -2.04
KRT9P35527 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC2.29□□□□□ -2.04
KRT9P35527 MIR3169-201ENST00000578032 83 ntBASIC2.29□□□□□ -2.04
KRT9P35527 SNORD53-201ENST00000579969 78 ntBASIC2.29□□□□□ -2.04
KRT9P35527 MIR4680-201ENST00000580906 66 ntBASIC2.29□□□□□ -2.04
KRT9P35527 MIR5006-201ENST00000583027 110 ntBASIC2.29□□□□□ -2.04
KRT9P35527 AC005899.2-201ENST00000584353 90 ntBASIC2.29□□□□□ -2.04
KRT9P35527 AC006006.1-201ENST00000603082 144 ntBASIC2.29□□□□□ -2.04
KRT9P35527 AC007485.1-201ENST00000616755 206 ntBASIC2.29□□□□□ -2.04
KRT9P35527 AL162373.1-201ENST00000620433 407 ntBASIC2.29□□□□□ -2.04
KRT9P35527 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.29□□□□□ -2.04
KRT9P35527 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.29□□□□□ -2.04
KRT9P35527 AC008555.8-201ENST00000623602 2168 ntBASIC2.29□□□□□ -2.04
KRT9P35527 Y_RNA.401-201ENST00000383965 117 ntBASIC2.28□□□□□ -2.04
KRT9P35527 RNU6-574P-201ENST00000384265 107 ntBASIC2.28□□□□□ -2.04
KRT9P35527 RNU6-331P-201ENST00000384724 107 ntBASIC2.28□□□□□ -2.04
KRT9P35527 MIR32-201ENST00000384965 70 ntBASIC2.28□□□□□ -2.04
KRT9P35527 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
KRT9P35527 RNU6-174P-201ENST00000410406 106 ntBASIC2.28□□□□□ -2.04
KRT9P35527 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.28□□□□□ -2.04
KRT9P35527 AL356320.1-201ENST00000429616 163 ntBASIC2.28□□□□□ -2.04
KRT9P35527 MTCO3P8-201ENST00000453691 755 ntBASIC2.28□□□□□ -2.04
KRT9P35527 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.28□□□□□ -2.04
KRT9P35527 RPS27P21-201ENST00000486977 252 ntBASIC2.28□□□□□ -2.04
KRT9P35527 RNU6-699P-201ENST00000517081 110 ntBASIC2.28□□□□□ -2.04
KRT9P35527 SNORD116.3-201ENST00000517176 78 ntBASIC2.28□□□□□ -2.04
KRT9P35527 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.28□□□□□ -2.04
KRT9P35527 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.28□□□□□ -2.04
KRT9P35527 AL117187.1-201ENST00000555482 181 ntBASIC2.28□□□□□ -2.04
KRT9P35527 AC008269.2-201ENST00000561915 1105 ntBASIC2.28□□□□□ -2.04
KRT9P35527 MIR5696-201ENST00000578474 85 ntBASIC2.28□□□□□ -2.04
KRT9P35527 MIR4273-201ENST00000582824 84 ntBASIC2.28□□□□□ -2.04
KRT9P35527 AC002984.1-201ENST00000591692 448 ntBASIC2.28□□□□□ -2.04
KRT9P35527 RMST_6.1-201ENST00000611980 203 ntBASIC2.28□□□□□ -2.04
KRT9P35527 AC087588.2-201ENST00000617667 426 ntBASIC2.28□□□□□ -2.04
KRT9P35527 MIR7843-201ENST00000622274 79 ntBASIC2.28□□□□□ -2.04
KRT9P35527 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
KRT9P35527 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
KRT9P35527 SNORD115-32-201ENST00000364079 82 ntBASIC2.27□□□□□ -2.05
KRT9P35527 RNY1P14-201ENST00000384426 108 ntBASIC2.27□□□□□ -2.05
KRT9P35527 Y_RNA.533-201ENST00000384596 114 ntBASIC2.27□□□□□ -2.05
KRT9P35527 MIR1302-3-201ENST00000408128 138 ntBASIC2.27□□□□□ -2.05
KRT9P35527 AL135786.1-201ENST00000415892 214 ntBASIC2.27□□□□□ -2.05
KRT9P35527 AC243428.1-201ENST00000421099 264 ntBASIC2.27□□□□□ -2.05
KRT9P35527 AL353689.1-201ENST00000438895 199 ntBASIC2.27□□□□□ -2.05
KRT9P35527 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.27□□□□□ -2.05
KRT9P35527 RNU1-131P-201ENST00000458943 161 ntBASIC2.27□□□□□ -2.05
KRT9P35527 AC022493.2-201ENST00000506122 481 ntBASIC2.27□□□□□ -2.05
KRT9P35527 SCARNA16.2-201ENST00000516520 172 ntBASIC2.27□□□□□ -2.05
KRT9P35527 AC004817.2-201ENST00000561794 651 ntBASIC2.27□□□□□ -2.05
KRT9P35527 MIR4503-201ENST00000582187 83 ntBASIC2.27□□□□□ -2.05
KRT9P35527 AC011494.1-201ENST00000596454 237 ntBASIC2.27□□□□□ -2.05
KRT9P35527 7SK.7-201ENST00000603504 247 ntBASIC2.27□□□□□ -2.05
KRT9P35527 SNRPGP20-201ENST00000604477 205 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms