Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 TRBV12-2-201ENST00000489763 344 ntBASIC4.38□□□□□ -1.71
CLCN1P35523 SNORD77.4-201ENST00000516158 81 ntBASIC4.38□□□□□ -1.71
CLCN1P35523 RN7SKP21-201ENST00000516503 220 ntBASIC4.38□□□□□ -1.71
CLCN1P35523 RN7SKP209-201ENST00000516888 304 ntBASIC4.38□□□□□ -1.71
CLCN1P35523 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.38□□□□□ -1.71
CLCN1P35523 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
CLCN1P35523 AC012531.5-201ENST00000611375 151 ntBASIC4.38□□□□□ -1.71
CLCN1P35523 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
CLCN1P35523 MIR8059-201ENST00000620427 81 ntBASIC4.38□□□□□ -1.71
CLCN1P35523 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC4.38□□□□□ -1.71
CLCN1P35523 UCA1.1-201ENST00000620952 75 ntBASIC4.38□□□□□ -1.71
CLCN1P35523 AP001486.2-201ENST00000561652 5113 ntBASIC4.38□□□□□ -1.71
CLCN1P35523 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
CLCN1P35523 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC4.38□□□□□ -1.71
CLCN1P35523 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CLCN1P35523 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CLCN1P35523 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CLCN1P35523 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
CLCN1P35523 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.37□□□□□ -1.71
CLCN1P35523 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CLCN1P35523 Y_RNA.280-201ENST00000364765 112 ntBASIC4.37□□□□□ -1.71
CLCN1P35523 RN7SKP202-201ENST00000410439 330 ntBASIC4.37□□□□□ -1.71
CLCN1P35523 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.37□□□□□ -1.71
CLCN1P35523 RPL39P40-201ENST00000445481 146 ntBASIC4.37□□□□□ -1.71
CLCN1P35523 AL162151.2-201ENST00000448875 158 ntBASIC4.37□□□□□ -1.71
CLCN1P35523 Y_RNA.690-201ENST00000516603 95 ntBASIC4.37□□□□□ -1.71
CLCN1P35523 RNU6-965P-201ENST00000516721 96 ntBASIC4.37□□□□□ -1.71
CLCN1P35523 AP003730.1-201ENST00000524605 285 ntBASIC4.37□□□□□ -1.71
CLCN1P35523 MIR4679-2-201ENST00000578358 77 ntBASIC4.37□□□□□ -1.71
CLCN1P35523 MIR3613-201ENST00000579844 87 ntBASIC4.37□□□□□ -1.71
CLCN1P35523 MIR4438-201ENST00000585271 93 ntBASIC4.37□□□□□ -1.71
CLCN1P35523 AL670379.3-201ENST00000605040 251 ntBASIC4.37□□□□□ -1.71
CLCN1P35523 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CLCN1P35523 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CLCN1P35523 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CLCN1P35523 Y_RNA.43-201ENST00000362670 111 ntBASIC4.36□□□□□ -1.71
CLCN1P35523 RNU1-22P-201ENST00000363334 158 ntBASIC4.36□□□□□ -1.71
CLCN1P35523 SNORA57.1-201ENST00000391227 145 ntBASIC4.36□□□□□ -1.71
CLCN1P35523 AC126124.2-201ENST00000413542 321 ntBASIC4.36□□□□□ -1.71
CLCN1P35523 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC4.36□□□□□ -1.71
CLCN1P35523 RPS4XP11-201ENST00000446897 772 ntBASIC4.36□□□□□ -1.71
CLCN1P35523 RPL27AP5-201ENST00000469428 449 ntBASIC4.36□□□□□ -1.71
CLCN1P35523 RNU6-711P-201ENST00000517255 106 ntBASIC4.36□□□□□ -1.71
CLCN1P35523 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.36□□□□□ -1.71
CLCN1P35523 AC105245.1-201ENST00000581934 244 ntBASIC4.36□□□□□ -1.71
CLCN1P35523 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CLCN1P35523 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
CLCN1P35523 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CLCN1P35523 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
CLCN1P35523 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CLCN1P35523 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CLCN1P35523 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CLCN1P35523 RNU1-72P-201ENST00000362976 153 ntBASIC4.35□□□□□ -1.71
CLCN1P35523 RNU6-805P-201ENST00000365643 106 ntBASIC4.35□□□□□ -1.71
CLCN1P35523 SNORA26-201ENST00000391286 122 ntBASIC4.35□□□□□ -1.71
CLCN1P35523 MIR1251-201ENST00000408552 70 ntBASIC4.35□□□□□ -1.71
CLCN1P35523 Y_RNA.630-201ENST00000411370 108 ntBASIC4.35□□□□□ -1.71
CLCN1P35523 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC4.35□□□□□ -1.71
CLCN1P35523 U3.44-201ENST00000458938 192 ntBASIC4.35□□□□□ -1.71
CLCN1P35523 RPS29P21-201ENST00000496272 170 ntBASIC4.35□□□□□ -1.71
CLCN1P35523 AC093663.1-201ENST00000497190 394 ntBASIC4.35□□□□□ -1.71
CLCN1P35523 RAC1P2-201ENST00000511164 579 ntBASIC4.35□□□□□ -1.71
CLCN1P35523 RNU2-34P-201ENST00000516534 121 ntBASIC4.35□□□□□ -1.71
CLCN1P35523 RNU7-172P-201ENST00000517125 64 ntBASIC4.35□□□□□ -1.71
CLCN1P35523 RNA5SP170-201ENST00000517150 101 ntBASIC4.35□□□□□ -1.71
CLCN1P35523 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.35□□□□□ -1.71
CLCN1P35523 AC018630.3-201ENST00000542637 96 ntBASIC4.35□□□□□ -1.71
CLCN1P35523 MIR5684-201ENST00000585074 65 ntBASIC4.35□□□□□ -1.71
CLCN1P35523 MIR92B-201ENST00000607575 96 ntBASIC4.35□□□□□ -1.71
CLCN1P35523 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC4.35□□□□□ -1.71
CLCN1P35523 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CLCN1P35523 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC4.35□□□□□ -1.71
CLCN1P35523 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.35□□□□□ -1.71
CLCN1P35523 AL603914.1-201ENST00000401964 204 ntBASIC4.34□□□□□ -1.71
CLCN1P35523 AC245102.2-201ENST00000448956 180 ntBASIC4.34□□□□□ -1.71
CLCN1P35523 HMGN2P18-201ENST00000450680 270 ntBASIC4.34□□□□□ -1.71
CLCN1P35523 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
CLCN1P35523 RN7SL604P-201ENST00000492589 296 ntBASIC4.34□□□□□ -1.71
CLCN1P35523 AC097462.1-201ENST00000514125 324 ntBASIC4.34□□□□□ -1.71
CLCN1P35523 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC4.34□□□□□ -1.71
CLCN1P35523 MIR3160-1-201ENST00000577972 85 ntBASIC4.34□□□□□ -1.71
CLCN1P35523 MIR3117-201ENST00000584034 78 ntBASIC4.34□□□□□ -1.71
CLCN1P35523 Z82217.1-201ENST00000625157 8149 ntBASIC4.34□□□□□ -1.71
CLCN1P35523 AC091564.4-201ENST00000533934 2194 ntBASIC4.34□□□□□ -1.72
CLCN1P35523 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
CLCN1P35523 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.33□□□□□ -1.72
CLCN1P35523 Y_RNA.111-201ENST00000363248 100 ntBASIC4.33□□□□□ -1.72
CLCN1P35523 RNU6-1209P-201ENST00000363655 107 ntBASIC4.33□□□□□ -1.72
CLCN1P35523 RNU6-647P-201ENST00000364243 107 ntBASIC4.33□□□□□ -1.72
CLCN1P35523 SNORA14A-201ENST00000364773 135 ntBASIC4.33□□□□□ -1.72
CLCN1P35523 MIR548A3-201ENST00000385297 97 ntBASIC4.33□□□□□ -1.72
CLCN1P35523 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CLCN1P35523 SNORD11-201ENST00000459124 84 ntBASIC4.33□□□□□ -1.72
CLCN1P35523 RPL21P129-201ENST00000491732 478 ntBASIC4.33□□□□□ -1.72
CLCN1P35523 SNORA18.4-201ENST00000516440 124 ntBASIC4.33□□□□□ -1.72
CLCN1P35523 RNA5SP490-201ENST00000517141 136 ntBASIC4.33□□□□□ -1.72
CLCN1P35523 AC011604.1-201ENST00000545978 196 ntBASIC4.33□□□□□ -1.72
CLCN1P35523 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.33□□□□□ -1.72
CLCN1P35523 MIR3939-201ENST00000582614 106 ntBASIC4.33□□□□□ -1.72
CLCN1P35523 AC097639.2-201ENST00000603159 172 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms