Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 MIR515-1-201ENST00000384884 83 ntBASIC1.96□□□□□ -2.1
HOXD13P35453 AC019129.1-201ENST00000403786 261 ntBASIC1.96□□□□□ -2.1
HOXD13P35453 RNU2-7P-201ENST00000410794 178 ntBASIC1.96□□□□□ -2.1
HOXD13P35453 AC060773.1-201ENST00000421698 310 ntBASIC1.96□□□□□ -2.1
HOXD13P35453 USP9YP16-201ENST00000430287 407 ntBASIC1.96□□□□□ -2.1
HOXD13P35453 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.96□□□□□ -2.1
HOXD13P35453 NDUFB4P10-201ENST00000452541 359 ntBASIC1.96□□□□□ -2.1
HOXD13P35453 USP9YP23-201ENST00000455085 407 ntBASIC1.96□□□□□ -2.1
HOXD13P35453 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.96□□□□□ -2.1
HOXD13P35453 HMGN1P13-201ENST00000505795 138 ntBASIC1.96□□□□□ -2.1
HOXD13P35453 RNA5SP384-201ENST00000516615 116 ntBASIC1.96□□□□□ -2.1
HOXD13P35453 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.96□□□□□ -2.1
HOXD13P35453 RNU6-112P-201ENST00000363599 104 ntBASIC1.95□□□□□ -2.1
HOXD13P35453 MIR1261-201ENST00000408659 82 ntBASIC1.95□□□□□ -2.1
HOXD13P35453 RNU6-57P-201ENST00000411348 103 ntBASIC1.95□□□□□ -2.1
HOXD13P35453 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.95□□□□□ -2.1
HOXD13P35453 MTCYBP10-201ENST00000424905 650 ntBASIC1.95□□□□□ -2.1
HOXD13P35453 MTCO3P29-201ENST00000432119 779 ntBASIC1.95□□□□□ -2.1
HOXD13P35453 RPL23AP50-201ENST00000434149 455 ntBASIC1.95□□□□□ -2.1
HOXD13P35453 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.95□□□□□ -2.1
HOXD13P35453 Y_RNA.635-201ENST00000459041 101 ntBASIC1.95□□□□□ -2.1
HOXD13P35453 AP000870.1-201ENST00000472927 406 ntBASIC1.95□□□□□ -2.1
HOXD13P35453 AC116353.2-201ENST00000505332 712 ntBASIC1.95□□□□□ -2.1
HOXD13P35453 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.95□□□□□ -2.1
HOXD13P35453 RNU6-1114P-201ENST00000516022 107 ntBASIC1.95□□□□□ -2.1
HOXD13P35453 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.95□□□□□ -2.1
HOXD13P35453 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.95□□□□□ -2.1
HOXD13P35453 AC090617.3-201ENST00000573670 475 ntBASIC1.95□□□□□ -2.1
HOXD13P35453 AC009229.3-201ENST00000608056 282 ntBASIC1.95□□□□□ -2.1
HOXD13P35453 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.95□□□□□ -2.1
HOXD13P35453 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.94□□□□□ -2.1
HOXD13P35453 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.94□□□□□ -2.1
HOXD13P35453 RNU6-661P-201ENST00000362409 107 ntBASIC1.94□□□□□ -2.1
HOXD13P35453 Y_RNA.88-201ENST00000363029 99 ntBASIC1.94□□□□□ -2.1
HOXD13P35453 RNY1P16-201ENST00000363063 111 ntBASIC1.94□□□□□ -2.1
HOXD13P35453 SNORA72.2-201ENST00000365028 127 ntBASIC1.94□□□□□ -2.1
HOXD13P35453 CYCSP49-201ENST00000420810 319 ntBASIC1.94□□□□□ -2.1
HOXD13P35453 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC1.94□□□□□ -2.1
HOXD13P35453 AC010095.1-201ENST00000443543 144 ntBASIC1.94□□□□□ -2.1
HOXD13P35453 UBE2V1P7-201ENST00000446395 340 ntBASIC1.94□□□□□ -2.1
HOXD13P35453 RPL36AP21-201ENST00000490372 323 ntBASIC1.94□□□□□ -2.1
HOXD13P35453 Y_RNA.670-201ENST00000516255 105 ntBASIC1.94□□□□□ -2.1
HOXD13P35453 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.94□□□□□ -2.1
HOXD13P35453 UBL5P4-201ENST00000562584 236 ntBASIC1.94□□□□□ -2.1
HOXD13P35453 MIR5695-201ENST00000579717 85 ntBASIC1.94□□□□□ -2.1
HOXD13P35453 MIR4298-201ENST00000584380 73 ntBASIC1.94□□□□□ -2.1
HOXD13P35453 AL355802.3-201ENST00000607571 545 ntBASIC1.94□□□□□ -2.1
HOXD13P35453 AC010999.1-201ENST00000611856 324 ntBASIC1.94□□□□□ -2.1
HOXD13P35453 AC006001.4-201ENST00000622243 395 ntBASIC1.94□□□□□ -2.1
HOXD13P35453 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
HOXD13P35453 AC010615.1-201ENST00000594254 1764 ntBASIC1.94□□□□□ -2.1
HOXD13P35453 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
HOXD13P35453 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
HOXD13P35453 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
HOXD13P35453 MIR190B-201ENST00000401119 79 ntBASIC1.93□□□□□ -2.1
HOXD13P35453 MTND3P23-201ENST00000431980 347 ntBASIC1.93□□□□□ -2.1
HOXD13P35453 FTH1P12-201ENST00000432137 551 ntBASIC1.93□□□□□ -2.1
HOXD13P35453 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.93□□□□□ -2.1
HOXD13P35453 RNU6-221P-201ENST00000459541 99 ntBASIC1.93□□□□□ -2.1
HOXD13P35453 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.93□□□□□ -2.1
HOXD13P35453 RPL23AP63-201ENST00000498752 471 ntBASIC1.93□□□□□ -2.1
HOXD13P35453 AC093303.1-201ENST00000514549 295 ntBASIC1.93□□□□□ -2.1
HOXD13P35453 SNORA31.17-201ENST00000516953 127 ntBASIC1.93□□□□□ -2.1
HOXD13P35453 CYCSP23-201ENST00000519781 313 ntBASIC1.93□□□□□ -2.1
HOXD13P35453 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.93□□□□□ -2.1
HOXD13P35453 MIR3198-2-201ENST00000577868 80 ntBASIC1.93□□□□□ -2.1
HOXD13P35453 AC103810.8-201ENST00000607347 118 ntBASIC1.93□□□□□ -2.1
HOXD13P35453 AC022306.2-201ENST00000617563 647 ntBASIC1.93□□□□□ -2.1
HOXD13P35453 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.92□□□□□ -2.1
HOXD13P35453 RNU6-1266P-201ENST00000362794 105 ntBASIC1.92□□□□□ -2.1
HOXD13P35453 snoU2-30.2-201ENST00000362805 70 ntBASIC1.92□□□□□ -2.1
HOXD13P35453 Y_RNA.106-201ENST00000363189 100 ntBASIC1.92□□□□□ -2.1
HOXD13P35453 RNU6-727P-201ENST00000363592 107 ntBASIC1.92□□□□□ -2.1
HOXD13P35453 RNU6-1240P-201ENST00000365155 104 ntBASIC1.92□□□□□ -2.1
HOXD13P35453 MIR10B-201ENST00000385011 110 ntBASIC1.92□□□□□ -2.1
HOXD13P35453 MIR30A-201ENST00000385092 71 ntBASIC1.92□□□□□ -2.1
HOXD13P35453 RNU1-139P-201ENST00000391307 165 ntBASIC1.92□□□□□ -2.1
HOXD13P35453 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.92□□□□□ -2.1
HOXD13P35453 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.92□□□□□ -2.1
HOXD13P35453 AL445305.1-201ENST00000432577 575 ntBASIC1.92□□□□□ -2.1
HOXD13P35453 AC099677.2-201ENST00000436385 175 ntBASIC1.92□□□□□ -2.1
HOXD13P35453 HMGN2P34-201ENST00000437647 269 ntBASIC1.92□□□□□ -2.1
HOXD13P35453 AC091179.3-201ENST00000474761 144 ntBASIC1.92□□□□□ -2.1
HOXD13P35453 AC010409.1-201ENST00000487382 476 ntBASIC1.92□□□□□ -2.1
HOXD13P35453 AC103851.1-201ENST00000506833 274 ntBASIC1.92□□□□□ -2.1
HOXD13P35453 Y_RNA.691-201ENST00000516611 103 ntBASIC1.92□□□□□ -2.1
HOXD13P35453 RNA5SP481-201ENST00000516814 122 ntBASIC1.92□□□□□ -2.1
HOXD13P35453 MIR5701-3-201ENST00000578890 82 ntBASIC1.92□□□□□ -2.1
HOXD13P35453 MIR5701-1-201ENST00000585138 82 ntBASIC1.92□□□□□ -2.1
HOXD13P35453 MIR5701-2-201ENST00000615634 82 ntBASIC1.92□□□□□ -2.1
HOXD13P35453 AC126177.8-201ENST00000618339 1015 ntBASIC1.92□□□□□ -2.1
HOXD13P35453 MIR338-201ENST00000636369 67 ntBASIC1.92□□□□□ -2.1
HOXD13P35453 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
HOXD13P35453 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
HOXD13P35453 RNU6-414P-201ENST00000363705 104 ntBASIC1.91□□□□□ -2.1
HOXD13P35453 Y_RNA.364-201ENST00000365532 101 ntBASIC1.91□□□□□ -2.1
HOXD13P35453 Y_RNA.473-201ENST00000384333 102 ntBASIC1.91□□□□□ -2.1
HOXD13P35453 AC098614.3-201ENST00000438957 440 ntBASIC1.91□□□□□ -2.1
HOXD13P35453 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.91□□□□□ -2.1
HOXD13P35453 MTND3P10-201ENST00000450967 341 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms