Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 AL034345.1-201ENST00000407768 123 ntBASIC0.61□□□□□ -2.31
RPA3P35244 RNA5SP247-201ENST00000411181 105 ntBASIC0.61□□□□□ -2.31
RPA3P35244 CDK8P2-201ENST00000415020 547 ntBASIC0.61□□□□□ -2.31
RPA3P35244 AC008134.1-201ENST00000420943 193 ntBASIC0.61□□□□□ -2.31
RPA3P35244 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.61□□□□□ -2.31
RPA3P35244 RNU6-221P-201ENST00000459541 99 ntBASIC0.61□□□□□ -2.31
RPA3P35244 RPS26P48-201ENST00000491713 339 ntBASIC0.61□□□□□ -2.31
RPA3P35244 AF186996.7-201ENST00000492781 209 ntBASIC0.61□□□□□ -2.31
RPA3P35244 RNU7-128P-201ENST00000517247 62 ntBASIC0.61□□□□□ -2.31
RPA3P35244 SUB1P2-201ENST00000556401 297 ntBASIC0.61□□□□□ -2.31
RPA3P35244 SNRPGP20-201ENST00000604477 205 ntBASIC0.61□□□□□ -2.31
RPA3P35244 AC008536.2-201ENST00000607284 349 ntBASIC0.61□□□□□ -2.31
RPA3P35244 AC073349.3-201ENST00000617616 186 ntBASIC0.61□□□□□ -2.31
RPA3P35244 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.61□□□□□ -2.31
RPA3P35244 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.61□□□□□ -2.31
RPA3P35244 AC008873.1-201ENST00000625051 138 ntBASIC0.61□□□□□ -2.31
RPA3P35244 SCARNA4-201ENST00000629045 128 ntBASIC0.61□□□□□ -2.31
RPA3P35244 AC023934.1-201ENST00000574529 2389 ntBASIC0.61□□□□□ -2.31
RPA3P35244 HSBP1P2-201ENST00000299671 229 ntBASIC0.6□□□□□ -2.31
RPA3P35244 RNA5SP361-201ENST00000362686 118 ntBASIC0.6□□□□□ -2.31
RPA3P35244 SNORA80D-201ENST00000384488 135 ntBASIC0.6□□□□□ -2.31
RPA3P35244 MIR92A1-201ENST00000385233 78 ntBASIC0.6□□□□□ -2.31
RPA3P35244 RNA5SP219-201ENST00000390940 113 ntBASIC0.6□□□□□ -2.31
RPA3P35244 RNU6-248P-201ENST00000410720 107 ntBASIC0.6□□□□□ -2.31
RPA3P35244 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.6□□□□□ -2.31
RPA3P35244 RPS26P5-201ENST00000418544 335 ntBASIC0.6□□□□□ -2.31
RPA3P35244 MTCYBP8-201ENST00000422855 651 ntBASIC0.6□□□□□ -2.31
RPA3P35244 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.6□□□□□ -2.31
RPA3P35244 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.6□□□□□ -2.31
RPA3P35244 RNU7-180P-201ENST00000459240 63 ntBASIC0.6□□□□□ -2.31
RPA3P35244 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.6□□□□□ -2.31
RPA3P35244 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.6□□□□□ -2.31
RPA3P35244 MIR4714-201ENST00000580728 77 ntBASIC0.6□□□□□ -2.31
RPA3P35244 AC079248.2-201ENST00000623779 326 ntBASIC0.6□□□□□ -2.31
RPA3P35244 ZNF204P-201ENST00000416749 2397 ntBASIC0.59□□□□□ -2.31
RPA3P35244 RNU4-21P-201ENST00000362802 126 ntBASIC0.59□□□□□ -2.31
RPA3P35244 RNU6-517P-201ENST00000384362 110 ntBASIC0.59□□□□□ -2.31
RPA3P35244 MIR653-201ENST00000385279 96 ntBASIC0.59□□□□□ -2.31
RPA3P35244 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
RPA3P35244 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.59□□□□□ -2.31
RPA3P35244 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC0.59□□□□□ -2.31
RPA3P35244 AL356010.1-201ENST00000456364 102 ntBASIC0.59□□□□□ -2.31
RPA3P35244 CCDC34P1-201ENST00000507441 517 ntBASIC0.59□□□□□ -2.31
RPA3P35244 AC104576.1-201ENST00000524225 88 ntBASIC0.59□□□□□ -2.31
RPA3P35244 AC009094.1-201ENST00000564443 426 ntBASIC0.59□□□□□ -2.31
RPA3P35244 MIR5000-201ENST00000577717 103 ntBASIC0.59□□□□□ -2.31
RPA3P35244 AC122133.1-201ENST00000613964 233 ntBASIC0.59□□□□□ -2.31
RPA3P35244 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
RPA3P35244 MIR450B-201ENST00000401182 78 ntBASIC0.58□□□□□ -2.32
RPA3P35244 RNA5SP504-201ENST00000410676 117 ntBASIC0.58□□□□□ -2.32
RPA3P35244 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.58□□□□□ -2.32
RPA3P35244 MTCO3P18-201ENST00000440206 761 ntBASIC0.58□□□□□ -2.32
RPA3P35244 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC0.58□□□□□ -2.32
RPA3P35244 SNORA14.1-201ENST00000516113 141 ntBASIC0.58□□□□□ -2.32
RPA3P35244 RNA5SP220-201ENST00000516298 104 ntBASIC0.58□□□□□ -2.32
RPA3P35244 RNU6-1223P-201ENST00000517124 104 ntBASIC0.58□□□□□ -2.32
RPA3P35244 RNA5SP454-201ENST00000517231 127 ntBASIC0.58□□□□□ -2.32
RPA3P35244 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC0.58□□□□□ -2.32
RPA3P35244 AC060788.1-201ENST00000521318 469 ntBASIC0.58□□□□□ -2.32
RPA3P35244 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
RPA3P35244 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.58□□□□□ -2.32
RPA3P35244 AC004584.2-201ENST00000570407 410 ntBASIC0.58□□□□□ -2.32
RPA3P35244 FGF7P1-201ENST00000582820 288 ntBASIC0.58□□□□□ -2.32
RPA3P35244 AC234772.3-201ENST00000602277 528 ntBASIC0.58□□□□□ -2.32
RPA3P35244 HULC.1-201ENST00000612720 240 ntBASIC0.58□□□□□ -2.32
RPA3P35244 uc_338.34-201ENST00000617467 174 ntBASIC0.58□□□□□ -2.32
RPA3P35244 AC022960.3-201ENST00000619794 441 ntBASIC0.58□□□□□ -2.32
RPA3P35244 OR5AK4P-201ENST00000635912 903 ntBASIC0.58□□□□□ -2.32
RPA3P35244 AP000568.1-201ENST00000282964 442 ntBASIC0.57□□□□□ -2.32
RPA3P35244 RNU6-199P-201ENST00000362954 107 ntBASIC0.57□□□□□ -2.32
RPA3P35244 Y_RNA.201-201ENST00000364052 96 ntBASIC0.57□□□□□ -2.32
RPA3P35244 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.57□□□□□ -2.32
RPA3P35244 MTND4P32-201ENST00000437189 1237 ntBASIC0.57□□□□□ -2.32
RPA3P35244 STAG3L5P-204ENST00000443759 179 ntBASIC0.57□□□□□ -2.32
RPA3P35244 U8.21-201ENST00000459536 136 ntBASIC0.57□□□□□ -2.32
RPA3P35244 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.57□□□□□ -2.32
RPA3P35244 BET1P1-201ENST00000482276 359 ntBASIC0.57□□□□□ -2.32
RPA3P35244 TRBVA-201ENST00000498804 316 ntBASIC0.57□□□□□ -2.32
RPA3P35244 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC0.57□□□□□ -2.32
RPA3P35244 RNU6-917P-201ENST00000516294 104 ntBASIC0.57□□□□□ -2.32
RPA3P35244 RNA5SP255-201ENST00000516370 107 ntBASIC0.57□□□□□ -2.32
RPA3P35244 AC090049.2-201ENST00000550377 109 ntBASIC0.57□□□□□ -2.32
RPA3P35244 MIR3913-1-201ENST00000577744 102 ntBASIC0.57□□□□□ -2.32
RPA3P35244 AC007494.3-201ENST00000624660 743 ntBASIC0.57□□□□□ -2.32
RPA3P35244 FER-210ENST00000628534 558 ntTSL 5 BASIC0.57□□□□□ -2.32
RPA3P35244 AL390237.1-201ENST00000404226 1415 ntBASIC0.56□□□□□ -2.32
RPA3P35244 FGF7P2-201ENST00000332473 296 ntBASIC0.56□□□□□ -2.32
RPA3P35244 RNU4-12P-201ENST00000365233 139 ntBASIC0.56□□□□□ -2.32
RPA3P35244 MIR320B2-201ENST00000408479 138 ntBASIC0.56□□□□□ -2.32
RPA3P35244 MTATP6P18-201ENST00000417994 673 ntBASIC0.56□□□□□ -2.32
RPA3P35244 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.56□□□□□ -2.32
RPA3P35244 MTCO2P11-201ENST00000431069 680 ntBASIC0.56□□□□□ -2.32
RPA3P35244 AL358934.1-201ENST00000432346 324 ntBASIC0.56□□□□□ -2.32
RPA3P35244 AL157398.1-201ENST00000452981 186 ntBASIC0.56□□□□□ -2.32
RPA3P35244 RNU6-344P-201ENST00000516635 111 ntBASIC0.56□□□□□ -2.32
RPA3P35244 MTND4P7-201ENST00000523876 130 ntBASIC0.56□□□□□ -2.32
RPA3P35244 MDM2-233ENST00000545204 398 ntTSL 5 BASIC0.56□□□□□ -2.32
RPA3P35244 FRG2DP-202ENST00000566967 323 ntBASIC0.56□□□□□ -2.32
RPA3P35244 MIR3915-201ENST00000578518 97 ntBASIC0.56□□□□□ -2.32
RPA3P35244 U6.73-201ENST00000619194 103 ntBASIC0.56□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 136.5 ms