Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 MIR4509-1-201ENST00000618224 94 ntBASIC0.23□□□□□ -2.37
CASQ1P31415 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.23□□□□□ -2.37
CASQ1P31415 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
CASQ1P31415 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC0.22□□□□□ -2.37
CASQ1P31415 MIRLET7C-201ENST00000362160 84 ntBASIC0.22□□□□□ -2.37
CASQ1P31415 Y_RNA.100-201ENST00000363141 102 ntBASIC0.22□□□□□ -2.37
CASQ1P31415 MIR513B-201ENST00000385136 84 ntBASIC0.22□□□□□ -2.37
CASQ1P31415 RNU4-46P-201ENST00000410818 138 ntBASIC0.22□□□□□ -2.37
CASQ1P31415 MRPS18CP6-201ENST00000423587 223 ntBASIC0.22□□□□□ -2.37
CASQ1P31415 ZNF114P1-201ENST00000453500 292 ntBASIC0.22□□□□□ -2.37
CASQ1P31415 AC010493.1-201ENST00000513479 292 ntBASIC0.22□□□□□ -2.37
CASQ1P31415 RNU7-99P-201ENST00000516271 62 ntBASIC0.22□□□□□ -2.37
CASQ1P31415 Vault.3-201ENST00000516676 95 ntBASIC0.22□□□□□ -2.37
CASQ1P31415 AC109810.1-201ENST00000534066 224 ntBASIC0.22□□□□□ -2.37
CASQ1P31415 AL137100.2-201ENST00000555786 315 ntBASIC0.22□□□□□ -2.37
CASQ1P31415 MTATP6P3-201ENST00000581686 676 ntBASIC0.22□□□□□ -2.37
CASQ1P31415 RNU6-85P-201ENST00000605989 107 ntBASIC0.22□□□□□ -2.37
CASQ1P31415 AC018645.2-201ENST00000609151 472 ntBASIC0.22□□□□□ -2.37
CASQ1P31415 AP000240.1-201ENST00000609910 452 ntBASIC0.22□□□□□ -2.37
CASQ1P31415 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC0.22□□□□□ -2.37
CASQ1P31415 RNU6-349P-201ENST00000362402 107 ntBASIC0.21□□□□□ -2.38
CASQ1P31415 Y_RNA.338-201ENST00000365320 114 ntBASIC0.21□□□□□ -2.38
CASQ1P31415 MIR216A-201ENST00000385063 110 ntBASIC0.21□□□□□ -2.38
CASQ1P31415 MIR1185-1-201ENST00000408598 86 ntBASIC0.21□□□□□ -2.38
CASQ1P31415 MTCO2P3-201ENST00000442543 421 ntBASIC0.21□□□□□ -2.38
CASQ1P31415 AC067940.1-201ENST00000458411 300 ntBASIC0.21□□□□□ -2.38
CASQ1P31415 AC108740.1-201ENST00000498629 225 ntBASIC0.21□□□□□ -2.38
CASQ1P31415 FABP5P5-201ENST00000515537 406 ntBASIC0.21□□□□□ -2.38
CASQ1P31415 RNU6-1053P-201ENST00000515930 101 ntBASIC0.21□□□□□ -2.38
CASQ1P31415 SNORD111.1-201ENST00000516421 86 ntBASIC0.21□□□□□ -2.38
CASQ1P31415 RNU6-612P-201ENST00000516909 102 ntBASIC0.21□□□□□ -2.38
CASQ1P31415 RNU6-410P-201ENST00000517006 107 ntBASIC0.21□□□□□ -2.38
CASQ1P31415 AC069113.1-201ENST00000517763 267 ntBASIC0.21□□□□□ -2.38
CASQ1P31415 MIR548AB-201ENST00000584917 84 ntBASIC0.21□□□□□ -2.38
CASQ1P31415 AC004223.2-201ENST00000590309 544 ntBASIC0.21□□□□□ -2.38
CASQ1P31415 AC136443.5-201ENST00000603741 370 ntBASIC0.21□□□□□ -2.38
CASQ1P31415 SNRPGP20-201ENST00000604477 205 ntBASIC0.21□□□□□ -2.38
CASQ1P31415 AC017083.3-201ENST00000609955 700 ntBASIC0.21□□□□□ -2.38
CASQ1P31415 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.21□□□□□ -2.38
CASQ1P31415 SCARNA4-201ENST00000629045 128 ntBASIC0.21□□□□□ -2.38
CASQ1P31415 AC005592.1-201ENST00000566527 1640 ntBASIC0.2□□□□□ -2.38
CASQ1P31415 RNU6-1327P-201ENST00000365302 105 ntBASIC0.2□□□□□ -2.38
CASQ1P31415 ISCA1P6-201ENST00000427740 390 ntBASIC0.2□□□□□ -2.38
CASQ1P31415 AC009961.2-201ENST00000435771 251 ntBASIC0.2□□□□□ -2.38
CASQ1P31415 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC0.2□□□□□ -2.38
CASQ1P31415 MTCO2P18-201ENST00000457151 658 ntBASIC0.2□□□□□ -2.38
CASQ1P31415 RNU7-182P-201ENST00000459009 62 ntBASIC0.2□□□□□ -2.38
CASQ1P31415 MTND2P32-201ENST00000521584 1038 ntBASIC0.2□□□□□ -2.38
CASQ1P31415 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.2□□□□□ -2.38
CASQ1P31415 MIR4769-201ENST00000584126 77 ntBASIC0.2□□□□□ -2.38
CASQ1P31415 AC025449.1-201ENST00000603896 529 ntBASIC0.2□□□□□ -2.38
CASQ1P31415 RNU6-94P-201ENST00000607728 107 ntBASIC0.2□□□□□ -2.38
CASQ1P31415 AC243829.6-201ENST00000612652 106 ntBASIC0.2□□□□□ -2.38
CASQ1P31415 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.2□□□□□ -2.38
CASQ1P31415 AC243829.3-201ENST00000622177 108 ntBASIC0.2□□□□□ -2.38
CASQ1P31415 RNA5SP264-201ENST00000363115 107 ntBASIC0.19□□□□□ -2.38
CASQ1P31415 RNU6-1286P-201ENST00000383871 107 ntBASIC0.19□□□□□ -2.38
CASQ1P31415 Y_RNA.399-201ENST00000383955 105 ntBASIC0.19□□□□□ -2.38
CASQ1P31415 RNU6-342P-201ENST00000384521 104 ntBASIC0.19□□□□□ -2.38
CASQ1P31415 RNA5SP494-201ENST00000410653 129 ntBASIC0.19□□□□□ -2.38
CASQ1P31415 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC0.19□□□□□ -2.38
CASQ1P31415 AC098592.1-201ENST00000419352 333 ntBASIC0.19□□□□□ -2.38
CASQ1P31415 MTCYBP10-201ENST00000424905 650 ntBASIC0.19□□□□□ -2.38
CASQ1P31415 MTND3P9-201ENST00000429526 346 ntBASIC0.19□□□□□ -2.38
CASQ1P31415 GPR143P-201ENST00000434155 205 ntBASIC0.19□□□□□ -2.38
CASQ1P31415 AC093019.1-201ENST00000443135 252 ntBASIC0.19□□□□□ -2.38
CASQ1P31415 HMGN2P26-201ENST00000463169 339 ntBASIC0.19□□□□□ -2.38
CASQ1P31415 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
CASQ1P31415 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC0.19□□□□□ -2.38
CASQ1P31415 UBE2V1P12-201ENST00000503954 474 ntBASIC0.19□□□□□ -2.38
CASQ1P31415 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC0.19□□□□□ -2.38
CASQ1P31415 RNU1-117P-201ENST00000517041 158 ntBASIC0.19□□□□□ -2.38
CASQ1P31415 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.19□□□□□ -2.38
CASQ1P31415 AL022161.1-201ENST00000604390 213 ntBASIC0.19□□□□□ -2.38
CASQ1P31415 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC0.19□□□□□ -2.38
CASQ1P31415 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC0.19□□□□□ -2.38
CASQ1P31415 SEPT14P19-203ENST00000633205 211 ntBASIC0.19□□□□□ -2.38
CASQ1P31415 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.19□□□□□ -2.38
CASQ1P31415 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.19□□□□□ -2.38
CASQ1P31415 SNORD87-201ENST00000364849 89 ntBASIC0.18□□□□□ -2.38
CASQ1P31415 RNU6-1106P-201ENST00000390845 107 ntBASIC0.18□□□□□ -2.38
CASQ1P31415 MIR320B2-201ENST00000408479 138 ntBASIC0.18□□□□□ -2.38
CASQ1P31415 AL663109.1-201ENST00000411498 844 ntBASIC0.18□□□□□ -2.38
CASQ1P31415 MTCO1P19-201ENST00000443487 500 ntBASIC0.18□□□□□ -2.38
CASQ1P31415 RPS29P1-201ENST00000465274 159 ntBASIC0.18□□□□□ -2.38
CASQ1P31415 AP000870.1-201ENST00000472927 406 ntBASIC0.18□□□□□ -2.38
CASQ1P31415 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.18□□□□□ -2.38
CASQ1P31415 MTND1P5-201ENST00000517906 940 ntBASIC0.18□□□□□ -2.38
CASQ1P31415 AC027288.2-201ENST00000553028 243 ntBASIC0.18□□□□□ -2.38
CASQ1P31415 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC0.18□□□□□ -2.38
CASQ1P31415 AC064836.2-201ENST00000609491 462 ntBASIC0.18□□□□□ -2.38
CASQ1P31415 MIR7844-201ENST00000616161 122 ntBASIC0.18□□□□□ -2.38
CASQ1P31415 SEPT14P17-201ENST00000617978 177 ntBASIC0.18□□□□□ -2.38
CASQ1P31415 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.18□□□□□ -2.38
CASQ1P31415 RNU6-227P-201ENST00000362865 103 ntBASIC0.17□□□□□ -2.38
CASQ1P31415 RNY4P34-201ENST00000364779 95 ntBASIC0.17□□□□□ -2.38
CASQ1P31415 RNU6-108P-201ENST00000365558 107 ntBASIC0.17□□□□□ -2.38
CASQ1P31415 VTRNA1-3-201ENST00000365645 89 ntBASIC0.17□□□□□ -2.38
CASQ1P31415 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.17□□□□□ -2.38
CASQ1P31415 RNU6-606P-201ENST00000384721 111 ntBASIC0.17□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 271.4 ms