Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 AL078605.1-201ENST00000603529 500 ntBASIC2.21□□□□□ -2.06
HOXC8P31273 AL137847.3-201ENST00000611521 109 ntBASIC2.21□□□□□ -2.06
HOXC8P31273 SCARNA4-201ENST00000629045 128 ntBASIC2.21□□□□□ -2.06
HOXC8P31273 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
HOXC8P31273 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
HOXC8P31273 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
HOXC8P31273 Y_RNA.39-201ENST00000362620 98 ntBASIC2.2□□□□□ -2.06
HOXC8P31273 RNU5B-2P-201ENST00000363036 113 ntBASIC2.2□□□□□ -2.06
HOXC8P31273 SNORD115-3-201ENST00000363100 82 ntBASIC2.2□□□□□ -2.06
HOXC8P31273 RNU6-743P-201ENST00000364151 106 ntBASIC2.2□□□□□ -2.06
HOXC8P31273 RNU4-42P-201ENST00000364738 142 ntBASIC2.2□□□□□ -2.06
HOXC8P31273 RNU1-115P-201ENST00000365329 160 ntBASIC2.2□□□□□ -2.06
HOXC8P31273 RNU6-639P-201ENST00000384074 107 ntBASIC2.2□□□□□ -2.06
HOXC8P31273 MIR487A-201ENST00000385009 80 ntBASIC2.2□□□□□ -2.06
HOXC8P31273 HMGN2P39-201ENST00000398005 273 ntBASIC2.2□□□□□ -2.06
HOXC8P31273 MRPL42P3-201ENST00000401492 326 ntBASIC2.2□□□□□ -2.06
HOXC8P31273 Y_RNA.605-201ENST00000410577 105 ntBASIC2.2□□□□□ -2.06
HOXC8P31273 MTND2P23-201ENST00000422990 651 ntBASIC2.2□□□□□ -2.06
HOXC8P31273 IPO7P1-201ENST00000442031 636 ntBASIC2.2□□□□□ -2.06
HOXC8P31273 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.2□□□□□ -2.06
HOXC8P31273 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.2□□□□□ -2.06
HOXC8P31273 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.2□□□□□ -2.06
HOXC8P31273 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.2□□□□□ -2.06
HOXC8P31273 Y_RNA.706-201ENST00000516933 99 ntBASIC2.2□□□□□ -2.06
HOXC8P31273 RNU7-4P-201ENST00000516961 62 ntBASIC2.2□□□□□ -2.06
HOXC8P31273 RNU6-1137P-201ENST00000517073 99 ntBASIC2.2□□□□□ -2.06
HOXC8P31273 RNA5SP402-201ENST00000517148 110 ntBASIC2.2□□□□□ -2.06
HOXC8P31273 RNU2-19P-201ENST00000517288 84 ntBASIC2.2□□□□□ -2.06
HOXC8P31273 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.2□□□□□ -2.06
HOXC8P31273 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.2□□□□□ -2.06
HOXC8P31273 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.2□□□□□ -2.06
HOXC8P31273 AC021231.3-201ENST00000558497 370 ntBASIC2.2□□□□□ -2.06
HOXC8P31273 AC104581.2-201ENST00000572227 430 ntBASIC2.2□□□□□ -2.06
HOXC8P31273 MIR5089-201ENST00000580047 84 ntBASIC2.2□□□□□ -2.06
HOXC8P31273 AC100812.1-201ENST00000607622 580 ntBASIC2.2□□□□□ -2.06
HOXC8P31273 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.2□□□□□ -2.06
HOXC8P31273 AC087588.2-201ENST00000617667 426 ntBASIC2.2□□□□□ -2.06
HOXC8P31273 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.2□□□□□ -2.06
HOXC8P31273 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
HOXC8P31273 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.19□□□□□ -2.06
HOXC8P31273 AL359851.1-201ENST00000569460 4997 ntBASIC2.19□□□□□ -2.06
HOXC8P31273 AC091812.1-201ENST00000432235 1948 ntBASIC2.19□□□□□ -2.06
HOXC8P31273 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.19□□□□□ -2.06
HOXC8P31273 RNU6-1159P-201ENST00000362933 107 ntBASIC2.19□□□□□ -2.06
HOXC8P31273 SNORA63C-201ENST00000364578 129 ntBASIC2.19□□□□□ -2.06
HOXC8P31273 Y_RNA.422-201ENST00000384054 114 ntBASIC2.19□□□□□ -2.06
HOXC8P31273 RNU6-1160P-201ENST00000384546 104 ntBASIC2.19□□□□□ -2.06
HOXC8P31273 SNORA80E-201ENST00000384744 137 ntBASIC2.19□□□□□ -2.06
HOXC8P31273 MIR29C-201ENST00000385231 88 ntBASIC2.19□□□□□ -2.06
HOXC8P31273 SNORA26.3-201ENST00000391119 136 ntBASIC2.19□□□□□ -2.06
HOXC8P31273 MIR190B-201ENST00000401119 79 ntBASIC2.19□□□□□ -2.06
HOXC8P31273 AC113618.1-201ENST00000416747 285 ntBASIC2.19□□□□□ -2.06
HOXC8P31273 AC055731.1-201ENST00000474387 401 ntBASIC2.19□□□□□ -2.06
HOXC8P31273 AC132942.1-201ENST00000486753 483 ntBASIC2.19□□□□□ -2.06
HOXC8P31273 RNU6-327P-201ENST00000516270 127 ntBASIC2.19□□□□□ -2.06
HOXC8P31273 RNU6-567P-201ENST00000516746 107 ntBASIC2.19□□□□□ -2.06
HOXC8P31273 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
HOXC8P31273 HSBP1P1-201ENST00000555205 166 ntBASIC2.19□□□□□ -2.06
HOXC8P31273 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.19□□□□□ -2.06
HOXC8P31273 AC233702.2-202ENST00000562547 291 ntBASIC2.19□□□□□ -2.06
HOXC8P31273 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.19□□□□□ -2.06
HOXC8P31273 MIR3923-201ENST00000579521 83 ntBASIC2.19□□□□□ -2.06
HOXC8P31273 Z98751.3-201ENST00000604447 521 ntBASIC2.19□□□□□ -2.06
HOXC8P31273 SNORD58B-201ENST00000607313 66 ntBASIC2.19□□□□□ -2.06
HOXC8P31273 PART1_1.1-201ENST00000611761 217 ntBASIC2.19□□□□□ -2.06
HOXC8P31273 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.19□□□□□ -2.06
HOXC8P31273 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.19□□□□□ -2.06
HOXC8P31273 AL606534.2-204ENST00000635008 178 ntBASIC2.19□□□□□ -2.06
HOXC8P31273 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.19□□□□□ -2.06
HOXC8P31273 AC005592.1-201ENST00000566527 1640 ntBASIC2.18□□□□□ -2.06
HOXC8P31273 RNU6-222P-201ENST00000362438 107 ntBASIC2.18□□□□□ -2.06
HOXC8P31273 Y_RNA.106-201ENST00000363189 100 ntBASIC2.18□□□□□ -2.06
HOXC8P31273 Y_RNA.358-201ENST00000365491 99 ntBASIC2.18□□□□□ -2.06
HOXC8P31273 SNORA69.1-201ENST00000390904 137 ntBASIC2.18□□□□□ -2.06
HOXC8P31273 AC019129.1-201ENST00000403786 261 ntBASIC2.18□□□□□ -2.06
HOXC8P31273 MTCYBP2-201ENST00000407745 171 ntBASIC2.18□□□□□ -2.06
HOXC8P31273 SRIP3-201ENST00000413200 219 ntBASIC2.18□□□□□ -2.06
HOXC8P31273 AC012306.1-201ENST00000423267 114 ntBASIC2.18□□□□□ -2.06
HOXC8P31273 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
HOXC8P31273 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.18□□□□□ -2.06
HOXC8P31273 AC145146.1-201ENST00000496370 254 ntBASIC2.18□□□□□ -2.06
HOXC8P31273 AC144568.1-201ENST00000520139 137 ntBASIC2.18□□□□□ -2.06
HOXC8P31273 AC016256.1-201ENST00000547971 354 ntBASIC2.18□□□□□ -2.06
HOXC8P31273 AC006600.1-201ENST00000572529 153 ntBASIC2.18□□□□□ -2.06
HOXC8P31273 MIR4680-201ENST00000580906 66 ntBASIC2.18□□□□□ -2.06
HOXC8P31273 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.18□□□□□ -2.06
HOXC8P31273 AL132822.1-201ENST00000617063 513 ntBASIC2.18□□□□□ -2.06
HOXC8P31273 AC138305.3-201ENST00000624988 240 ntBASIC2.18□□□□□ -2.06
HOXC8P31273 MIR4272-201ENST00000635924 64 ntBASIC2.18□□□□□ -2.06
HOXC8P31273 Y_RNA.158-201ENST00000363651 101 ntBASIC2.17□□□□□ -2.06
HOXC8P31273 RNU6-17P-201ENST00000384245 107 ntBASIC2.17□□□□□ -2.06
HOXC8P31273 RNU6-18P-201ENST00000384527 107 ntBASIC2.17□□□□□ -2.06
HOXC8P31273 RNU6-738P-201ENST00000384531 106 ntBASIC2.17□□□□□ -2.06
HOXC8P31273 Y_RNA.527-201ENST00000384573 102 ntBASIC2.17□□□□□ -2.06
HOXC8P31273 MIR583-201ENST00000384846 75 ntBASIC2.17□□□□□ -2.06
HOXC8P31273 snosnR66.1-201ENST00000391095 99 ntBASIC2.17□□□□□ -2.06
HOXC8P31273 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.17□□□□□ -2.06
HOXC8P31273 AC027124.2-201ENST00000428249 105 ntBASIC2.17□□□□□ -2.06
HOXC8P31273 AL445305.1-201ENST00000432577 575 ntBASIC2.17□□□□□ -2.06
HOXC8P31273 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 661.7 ms