Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.37□□□□□ -2.19
HOXA9P31269 MTND1P17-201ENST00000448961 204 ntBASIC1.37□□□□□ -2.19
HOXA9P31269 AC087477.1-201ENST00000465747 340 ntBASIC1.37□□□□□ -2.19
HOXA9P31269 AP003033.1-201ENST00000527244 415 ntBASIC1.37□□□□□ -2.19
HOXA9P31269 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.37□□□□□ -2.19
HOXA9P31269 POLR3GP2-201ENST00000588366 668 ntBASIC1.37□□□□□ -2.19
HOXA9P31269 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.37□□□□□ -2.19
HOXA9P31269 AC092794.1-201ENST00000612734 582 ntBASIC1.37□□□□□ -2.19
HOXA9P31269 AL590240.4-201ENST00000616908 390 ntBASIC1.37□□□□□ -2.19
HOXA9P31269 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.37□□□□□ -2.19
HOXA9P31269 AC022513.1-201ENST00000624512 117 ntBASIC1.37□□□□□ -2.19
HOXA9P31269 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.37□□□□□ -2.19
HOXA9P31269 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.36□□□□□ -2.19
HOXA9P31269 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
HOXA9P31269 Y_RNA.118-201ENST00000363300 101 ntBASIC1.36□□□□□ -2.19
HOXA9P31269 Y_RNA.122-201ENST00000363331 96 ntBASIC1.36□□□□□ -2.19
HOXA9P31269 RNU6-1059P-201ENST00000363752 98 ntBASIC1.36□□□□□ -2.19
HOXA9P31269 MIR150-201ENST00000385048 84 ntBASIC1.36□□□□□ -2.19
HOXA9P31269 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
HOXA9P31269 RNU6-955P-201ENST00000410497 104 ntBASIC1.36□□□□□ -2.19
HOXA9P31269 RNA5SP501-201ENST00000410990 112 ntBASIC1.36□□□□□ -2.19
HOXA9P31269 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.36□□□□□ -2.19
HOXA9P31269 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.36□□□□□ -2.19
HOXA9P31269 OR2AQ1P-201ENST00000451972 200 ntBASIC1.36□□□□□ -2.19
HOXA9P31269 AC007215.1-201ENST00000464893 276 ntBASIC1.36□□□□□ -2.19
HOXA9P31269 RPS23P5-201ENST00000495419 428 ntBASIC1.36□□□□□ -2.19
HOXA9P31269 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.36□□□□□ -2.19
HOXA9P31269 RNU5F-4P-201ENST00000516581 114 ntBASIC1.36□□□□□ -2.19
HOXA9P31269 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.36□□□□□ -2.19
HOXA9P31269 SNORA59B-202ENST00000578183 701 ntBASIC1.36□□□□□ -2.19
HOXA9P31269 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.36□□□□□ -2.19
HOXA9P31269 MIR4742-201ENST00000581069 85 ntBASIC1.36□□□□□ -2.19
HOXA9P31269 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.36□□□□□ -2.19
HOXA9P31269 MIR4452-201ENST00000583004 71 ntBASIC1.36□□□□□ -2.19
HOXA9P31269 AC060780.3-201ENST00000589464 80 ntBASIC1.36□□□□□ -2.19
HOXA9P31269 AC124303.1-201ENST00000605703 360 ntBASIC1.36□□□□□ -2.19
HOXA9P31269 AL022345.1-201ENST00000607292 135 ntBASIC1.36□□□□□ -2.19
HOXA9P31269 MIR7974-201ENST00000615835 79 ntBASIC1.36□□□□□ -2.19
HOXA9P31269 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.36□□□□□ -2.19
HOXA9P31269 LINC02555-201ENST00000563933 1951 ntBASIC1.36□□□□□ -2.19
HOXA9P31269 RNU6-545P-201ENST00000362681 104 ntBASIC1.35□□□□□ -2.19
HOXA9P31269 SNORD31B-201ENST00000364977 69 ntBASIC1.35□□□□□ -2.19
HOXA9P31269 RNU6-160P-201ENST00000384591 107 ntBASIC1.35□□□□□ -2.19
HOXA9P31269 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.35□□□□□ -2.19
HOXA9P31269 AC139712.2-201ENST00000424302 339 ntBASIC1.35□□□□□ -2.19
HOXA9P31269 USP9YP30-201ENST00000430729 455 ntBASIC1.35□□□□□ -2.19
HOXA9P31269 MTND4LP16-201ENST00000440828 295 ntBASIC1.35□□□□□ -2.19
HOXA9P31269 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.35□□□□□ -2.19
HOXA9P31269 DAP3P1-201ENST00000441522 278 ntBASIC1.35□□□□□ -2.19
HOXA9P31269 MTCO1P44-201ENST00000441935 243 ntBASIC1.35□□□□□ -2.19
HOXA9P31269 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.35□□□□□ -2.19
HOXA9P31269 AC016925.1-201ENST00000458303 298 ntBASIC1.35□□□□□ -2.19
HOXA9P31269 snoU13.18-201ENST00000459483 104 ntBASIC1.35□□□□□ -2.19
HOXA9P31269 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.35□□□□□ -2.19
HOXA9P31269 RNVU1-2-201ENST00000516326 135 ntBASIC1.35□□□□□ -2.19
HOXA9P31269 Y_RNA.682-201ENST00000516457 100 ntBASIC1.35□□□□□ -2.19
HOXA9P31269 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.35□□□□□ -2.19
HOXA9P31269 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.35□□□□□ -2.19
HOXA9P31269 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.35□□□□□ -2.19
HOXA9P31269 MIR5696-201ENST00000578474 85 ntBASIC1.35□□□□□ -2.19
HOXA9P31269 MIR4422-201ENST00000581938 83 ntBASIC1.35□□□□□ -2.19
HOXA9P31269 AC073413.2-201ENST00000604332 360 ntBASIC1.35□□□□□ -2.19
HOXA9P31269 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.35□□□□□ -2.19
HOXA9P31269 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.35□□□□□ -2.19
HOXA9P31269 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.35□□□□□ -2.19
HOXA9P31269 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.35□□□□□ -2.19
HOXA9P31269 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.34□□□□□ -2.19
HOXA9P31269 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
HOXA9P31269 RNU1-22P-201ENST00000363334 158 ntBASIC1.34□□□□□ -2.19
HOXA9P31269 Y_RNA.248-201ENST00000364501 109 ntBASIC1.34□□□□□ -2.19
HOXA9P31269 RNU6-1013P-201ENST00000384180 107 ntBASIC1.34□□□□□ -2.19
HOXA9P31269 RNU6-842P-201ENST00000384269 107 ntBASIC1.34□□□□□ -2.19
HOXA9P31269 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
HOXA9P31269 AL356776.1-201ENST00000406574 447 ntBASIC1.34□□□□□ -2.19
HOXA9P31269 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.34□□□□□ -2.19
HOXA9P31269 MTCO3P46-201ENST00000425787 232 ntBASIC1.34□□□□□ -2.19
HOXA9P31269 AC004386.2-201ENST00000441858 148 ntBASIC1.34□□□□□ -2.19
HOXA9P31269 MTCO3P8-201ENST00000453691 755 ntBASIC1.34□□□□□ -2.19
HOXA9P31269 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.34□□□□□ -2.19
HOXA9P31269 AC010531.2-201ENST00000465012 153 ntBASIC1.34□□□□□ -2.19
HOXA9P31269 MTND5P5-201ENST00000503764 376 ntBASIC1.34□□□□□ -2.19
HOXA9P31269 AC018710.1-201ENST00000506509 158 ntBASIC1.34□□□□□ -2.19
HOXA9P31269 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.34□□□□□ -2.19
HOXA9P31269 AC136443.5-201ENST00000603741 370 ntBASIC1.34□□□□□ -2.19
HOXA9P31269 RPL17P51-201ENST00000605218 238 ntBASIC1.34□□□□□ -2.19
HOXA9P31269 AC093913.1-201ENST00000614178 329 ntBASIC1.34□□□□□ -2.19
HOXA9P31269 AC005562.2-201ENST00000618264 111 ntBASIC1.34□□□□□ -2.19
HOXA9P31269 SCARNA4-201ENST00000629045 128 ntBASIC1.34□□□□□ -2.19
HOXA9P31269 MTND4P5-201ENST00000435821 1374 ntBASIC1.34□□□□□ -2.2
HOXA9P31269 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.33□□□□□ -2.2
HOXA9P31269 RNU6-596P-201ENST00000365395 98 ntBASIC1.33□□□□□ -2.2
HOXA9P31269 RNU6-438P-201ENST00000365561 103 ntBASIC1.33□□□□□ -2.2
HOXA9P31269 Y_RNA.473-201ENST00000384333 102 ntBASIC1.33□□□□□ -2.2
HOXA9P31269 MIR758-201ENST00000390227 88 ntBASIC1.33□□□□□ -2.2
HOXA9P31269 RNU6-510P-201ENST00000391239 108 ntBASIC1.33□□□□□ -2.2
HOXA9P31269 MTND3P8-201ENST00000412909 339 ntBASIC1.33□□□□□ -2.2
HOXA9P31269 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.33□□□□□ -2.2
HOXA9P31269 RPL30P13-201ENST00000418873 348 ntBASIC1.33□□□□□ -2.2
HOXA9P31269 MTATP6P13-201ENST00000438531 667 ntBASIC1.33□□□□□ -2.2
HOXA9P31269 RNU1-131P-201ENST00000458943 161 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms