Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
CDH3P22223 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.94□□□□□ -2.1
CDH3P22223 MIR5002-201ENST00000584713 97 ntBASIC1.94□□□□□ -2.1
CDH3P22223 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.94□□□□□ -2.1
CDH3P22223 AC025754.2-201ENST00000606491 432 ntBASIC1.94□□□□□ -2.1
CDH3P22223 MIR1244-1-201ENST00000612829 85 ntBASIC1.94□□□□□ -2.1
CDH3P22223 AL773524.1-201ENST00000614065 229 ntBASIC1.94□□□□□ -2.1
CDH3P22223 AC126177.8-201ENST00000618339 1015 ntBASIC1.94□□□□□ -2.1
CDH3P22223 MIR1244-3-201ENST00000635744 85 ntBASIC1.94□□□□□ -2.1
CDH3P22223 MIR1244-2-201ENST00000636449 85 ntBASIC1.94□□□□□ -2.1
CDH3P22223 MIR1244-4-202ENST00000636813 85 ntBASIC1.94□□□□□ -2.1
CDH3P22223 RNU6-545P-201ENST00000362681 104 ntBASIC1.93□□□□□ -2.1
CDH3P22223 Y_RNA.99-201ENST00000363138 105 ntBASIC1.93□□□□□ -2.1
CDH3P22223 RNU6-1164P-201ENST00000364428 107 ntBASIC1.93□□□□□ -2.1
CDH3P22223 Y_RNA.364-201ENST00000365532 101 ntBASIC1.93□□□□□ -2.1
CDH3P22223 RNU6-1040P-201ENST00000383974 107 ntBASIC1.93□□□□□ -2.1
CDH3P22223 RNU6-245P-201ENST00000384020 107 ntBASIC1.93□□□□□ -2.1
CDH3P22223 AC019129.1-201ENST00000403786 261 ntBASIC1.93□□□□□ -2.1
CDH3P22223 MIR1289-2-201ENST00000408360 111 ntBASIC1.93□□□□□ -2.1
CDH3P22223 AC244636.1-201ENST00000421152 228 ntBASIC1.93□□□□□ -2.1
CDH3P22223 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.93□□□□□ -2.1
CDH3P22223 MRPS18CP6-201ENST00000423587 223 ntBASIC1.93□□□□□ -2.1
CDH3P22223 U8.22-201ENST00000459141 133 ntBASIC1.93□□□□□ -2.1
CDH3P22223 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.93□□□□□ -2.1
CDH3P22223 AC093303.1-201ENST00000514549 295 ntBASIC1.93□□□□□ -2.1
CDH3P22223 RNU6-1114P-201ENST00000516022 107 ntBASIC1.93□□□□□ -2.1
CDH3P22223 SNORA25.14-201ENST00000516481 132 ntBASIC1.93□□□□□ -2.1
CDH3P22223 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.93□□□□□ -2.1
CDH3P22223 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.93□□□□□ -2.1
CDH3P22223 MTND5P16-201ENST00000460269 1703 ntBASIC1.93□□□□□ -2.1
CDH3P22223 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
CDH3P22223 MTND5P10-201ENST00000603719 1809 ntBASIC1.92□□□□□ -2.1
CDH3P22223 SNORD115-3-201ENST00000363100 82 ntBASIC1.92□□□□□ -2.1
CDH3P22223 Y_RNA.187-201ENST00000363918 113 ntBASIC1.92□□□□□ -2.1
CDH3P22223 SNORA67.2-201ENST00000384300 149 ntBASIC1.92□□□□□ -2.1
CDH3P22223 Y_RNA.577-201ENST00000384794 101 ntBASIC1.92□□□□□ -2.1
CDH3P22223 RNU2-2P-201ENST00000410396 191 ntBASIC1.92□□□□□ -2.1
CDH3P22223 RNA5SP504-201ENST00000410676 117 ntBASIC1.92□□□□□ -2.1
CDH3P22223 AC022028.1-201ENST00000412054 408 ntBASIC1.92□□□□□ -2.1
CDH3P22223 AC007098.1-201ENST00000420122 367 ntBASIC1.92□□□□□ -2.1
CDH3P22223 AC123900.1-201ENST00000420390 96 ntBASIC1.92□□□□□ -2.1
CDH3P22223 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.92□□□□□ -2.1
CDH3P22223 USP9YP16-201ENST00000430287 407 ntBASIC1.92□□□□□ -2.1
CDH3P22223 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.92□□□□□ -2.1
CDH3P22223 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.92□□□□□ -2.1
CDH3P22223 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.92□□□□□ -2.1
CDH3P22223 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.92□□□□□ -2.1
CDH3P22223 USP9YP23-201ENST00000455085 407 ntBASIC1.92□□□□□ -2.1
CDH3P22223 MIR2053-201ENST00000459295 91 ntBASIC1.92□□□□□ -2.1
CDH3P22223 AC105758.1-201ENST00000506038 399 ntBASIC1.92□□□□□ -2.1
CDH3P22223 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.92□□□□□ -2.1
CDH3P22223 AC087441.2-201ENST00000529141 262 ntBASIC1.92□□□□□ -2.1
CDH3P22223 MIR5695-201ENST00000579717 85 ntBASIC1.92□□□□□ -2.1
CDH3P22223 U2.15-201ENST00000611544 191 ntBASIC1.92□□□□□ -2.1
CDH3P22223 U2.16-201ENST00000613119 191 ntBASIC1.92□□□□□ -2.1
CDH3P22223 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.92□□□□□ -2.1
CDH3P22223 U2.12-201ENST00000613778 191 ntBASIC1.92□□□□□ -2.1
CDH3P22223 U2.20-201ENST00000613956 192 ntBASIC1.92□□□□□ -2.1
CDH3P22223 U2.9-201ENST00000615427 191 ntBASIC1.92□□□□□ -2.1
CDH3P22223 U2.11-201ENST00000616345 191 ntBASIC1.92□□□□□ -2.1
CDH3P22223 U2.2-201ENST00000616535 191 ntBASIC1.92□□□□□ -2.1
CDH3P22223 AC087588.2-201ENST00000617667 426 ntBASIC1.92□□□□□ -2.1
CDH3P22223 U2.3-201ENST00000617785 191 ntBASIC1.92□□□□□ -2.1
CDH3P22223 U2.19-201ENST00000618602 191 ntBASIC1.92□□□□□ -2.1
CDH3P22223 RNU2-1-201ENST00000618664 191 ntBASIC1.92□□□□□ -2.1
CDH3P22223 U2.6-201ENST00000619225 191 ntBASIC1.92□□□□□ -2.1
CDH3P22223 U2.5-201ENST00000619465 191 ntBASIC1.92□□□□□ -2.1
CDH3P22223 U2.10-201ENST00000620268 191 ntBASIC1.92□□□□□ -2.1
CDH3P22223 MIR7843-201ENST00000622274 79 ntBASIC1.92□□□□□ -2.1
CDH3P22223 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.92□□□□□ -2.1
CDH3P22223 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
CDH3P22223 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
CDH3P22223 RNU6-1115P-201ENST00000362490 106 ntBASIC1.91□□□□□ -2.1
CDH3P22223 Y_RNA.61-201ENST00000362835 102 ntBASIC1.91□□□□□ -2.1
CDH3P22223 Y_RNA.315-201ENST00000365117 102 ntBASIC1.91□□□□□ -2.1
CDH3P22223 RNU6-438P-201ENST00000365561 103 ntBASIC1.91□□□□□ -2.1
CDH3P22223 RNU6-1026P-201ENST00000384465 108 ntBASIC1.91□□□□□ -2.1
CDH3P22223 MIR518A2-201ENST00000384966 87 ntBASIC1.91□□□□□ -2.1
CDH3P22223 Y_RNA.579-201ENST00000390939 94 ntBASIC1.91□□□□□ -2.1
CDH3P22223 MIR320B2-201ENST00000408479 138 ntBASIC1.91□□□□□ -2.1
CDH3P22223 MIR1283-1-201ENST00000408494 87 ntBASIC1.91□□□□□ -2.1
CDH3P22223 RNA5SP489-201ENST00000410986 109 ntBASIC1.91□□□□□ -2.1
CDH3P22223 EIF1P2-201ENST00000428233 350 ntBASIC1.91□□□□□ -2.1
CDH3P22223 RNU7-87P-201ENST00000459343 62 ntBASIC1.91□□□□□ -2.1
CDH3P22223 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.91□□□□□ -2.1
CDH3P22223 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.91□□□□□ -2.1
CDH3P22223 RNU6-344P-201ENST00000516635 111 ntBASIC1.91□□□□□ -2.1
CDH3P22223 RNU6-264P-201ENST00000517134 104 ntBASIC1.91□□□□□ -2.1
CDH3P22223 RRN3P3-201ENST00000549207 578 ntBASIC1.91□□□□□ -2.1
CDH3P22223 AC090617.3-201ENST00000573670 475 ntBASIC1.91□□□□□ -2.1
CDH3P22223 MIR3122-201ENST00000577243 73 ntBASIC1.91□□□□□ -2.1
CDH3P22223 AC125232.2-201ENST00000592457 143 ntBASIC1.91□□□□□ -2.1
CDH3P22223 AL133255.1-201ENST00000606374 441 ntBASIC1.91□□□□□ -2.1
CDH3P22223 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.91□□□□□ -2.1
CDH3P22223 AC009487.4-201ENST00000624969 3585 ntBASIC1.91□□□□□ -2.1
CDH3P22223 RNU6-490P-201ENST00000362985 107 ntBASIC1.9□□□□□ -2.11
CDH3P22223 Y_RNA.146-201ENST00000363549 102 ntBASIC1.9□□□□□ -2.11
CDH3P22223 SNORD114-6-201ENST00000364393 72 ntBASIC1.9□□□□□ -2.11
CDH3P22223 Y_RNA.419-201ENST00000384041 102 ntBASIC1.9□□□□□ -2.11
CDH3P22223 RNU6-281P-201ENST00000384212 103 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms