Protein–RNA interactions for Protein: P20393

NR1D1, Nuclear receptor subfamily 1 group D member 1, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1D1P20393 VN1R91P-201ENST00000594377 169 ntBASIC2.24□□□□□ -2.05
NR1D1P20393 AL078605.1-201ENST00000603529 500 ntBASIC2.24□□□□□ -2.05
NR1D1P20393 MIR1244-1-201ENST00000612829 85 ntBASIC2.24□□□□□ -2.05
NR1D1P20393 MIR1244-3-201ENST00000635744 85 ntBASIC2.24□□□□□ -2.05
NR1D1P20393 MIR1244-2-201ENST00000636449 85 ntBASIC2.24□□□□□ -2.05
NR1D1P20393 MIR1244-4-202ENST00000636813 85 ntBASIC2.24□□□□□ -2.05
NR1D1P20393 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
NR1D1P20393 RNU6-1309P-201ENST00000363305 108 ntBASIC2.23□□□□□ -2.05
NR1D1P20393 Y_RNA.153-201ENST00000363615 91 ntBASIC2.23□□□□□ -2.05
NR1D1P20393 RNU5F-3P-201ENST00000363767 117 ntBASIC2.23□□□□□ -2.05
NR1D1P20393 Y_RNA.526-201ENST00000384572 110 ntBASIC2.23□□□□□ -2.05
NR1D1P20393 MIR32-201ENST00000384965 70 ntBASIC2.23□□□□□ -2.05
NR1D1P20393 RNU6-823P-201ENST00000391042 103 ntBASIC2.23□□□□□ -2.05
NR1D1P20393 MIR1287-201ENST00000408492 90 ntBASIC2.23□□□□□ -2.05
NR1D1P20393 MTCO3P29-201ENST00000432119 779 ntBASIC2.23□□□□□ -2.05
NR1D1P20393 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.23□□□□□ -2.05
NR1D1P20393 AC093852.1-201ENST00000503587 266 ntBASIC2.23□□□□□ -2.05
NR1D1P20393 SNORA31.16-201ENST00000516773 139 ntBASIC2.23□□□□□ -2.05
NR1D1P20393 CYCSP26-201ENST00000534107 320 ntBASIC2.23□□□□□ -2.05
NR1D1P20393 HSBP1P1-201ENST00000555205 166 ntBASIC2.23□□□□□ -2.05
NR1D1P20393 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC2.23□□□□□ -2.05
NR1D1P20393 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.23□□□□□ -2.05
NR1D1P20393 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.23□□□□□ -2.05
NR1D1P20393 MIR1273D-201ENST00000577266 86 ntBASIC2.23□□□□□ -2.05
NR1D1P20393 MIR5188-201ENST00000583467 113 ntBASIC2.23□□□□□ -2.05
NR1D1P20393 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.23□□□□□ -2.05
NR1D1P20393 AC009831.4-201ENST00000620744 325 ntBASIC2.23□□□□□ -2.05
NR1D1P20393 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
NR1D1P20393 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.22□□□□□ -2.05
NR1D1P20393 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
NR1D1P20393 RNU6-874P-201ENST00000362390 105 ntBASIC2.22□□□□□ -2.05
NR1D1P20393 Y_RNA.380-201ENST00000365663 111 ntBASIC2.22□□□□□ -2.05
NR1D1P20393 Y_RNA.389-201ENST00000383924 113 ntBASIC2.22□□□□□ -2.05
NR1D1P20393 RNU6-463P-201ENST00000384340 107 ntBASIC2.22□□□□□ -2.05
NR1D1P20393 SNORD23.1-201ENST00000408212 104 ntBASIC2.22□□□□□ -2.05
NR1D1P20393 Y_RNA.592-201ENST00000410274 109 ntBASIC2.22□□□□□ -2.05
NR1D1P20393 RNU6-101P-201ENST00000410323 104 ntBASIC2.22□□□□□ -2.05
NR1D1P20393 AL356320.1-201ENST00000429616 163 ntBASIC2.22□□□□□ -2.05
NR1D1P20393 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.22□□□□□ -2.05
NR1D1P20393 AC096638.1-201ENST00000444678 216 ntBASIC2.22□□□□□ -2.05
NR1D1P20393 U8.20-201ENST00000459445 131 ntBASIC2.22□□□□□ -2.05
NR1D1P20393 AC007215.1-201ENST00000464893 276 ntBASIC2.22□□□□□ -2.05
NR1D1P20393 MTCO2P24-201ENST00000515611 426 ntBASIC2.22□□□□□ -2.05
NR1D1P20393 RNA5SP364-201ENST00000516938 78 ntBASIC2.22□□□□□ -2.05
NR1D1P20393 AC090617.3-201ENST00000573670 475 ntBASIC2.22□□□□□ -2.05
NR1D1P20393 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.22□□□□□ -2.05
NR1D1P20393 AL353997.5-201ENST00000618886 171 ntBASIC2.22□□□□□ -2.05
NR1D1P20393 MIR6873-201ENST00000622788 63 ntBASIC2.22□□□□□ -2.05
NR1D1P20393 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.22□□□□□ -2.05
NR1D1P20393 MTND5P6-201ENST00000422338 1798 ntBASIC2.22□□□□□ -2.05
NR1D1P20393 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.22□□□□□ -2.05
NR1D1P20393 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.05
NR1D1P20393 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.21□□□□□ -2.06
NR1D1P20393 SNORD114-1-201ENST00000362705 72 ntBASIC2.21□□□□□ -2.06
NR1D1P20393 Y_RNA.106-201ENST00000363189 100 ntBASIC2.21□□□□□ -2.06
NR1D1P20393 RNY3P11-201ENST00000364153 102 ntBASIC2.21□□□□□ -2.06
NR1D1P20393 SNORD14.1-201ENST00000365609 90 ntBASIC2.21□□□□□ -2.06
NR1D1P20393 Y_RNA.424-201ENST00000384063 103 ntBASIC2.21□□□□□ -2.06
NR1D1P20393 SNORA36A-201ENST00000384221 132 ntBASIC2.21□□□□□ -2.06
NR1D1P20393 U8.10-201ENST00000384260 133 ntBASIC2.21□□□□□ -2.06
NR1D1P20393 Y_RNA.557-201ENST00000384680 107 ntBASIC2.21□□□□□ -2.06
NR1D1P20393 MIR29B2-201ENST00000385055 81 ntBASIC2.21□□□□□ -2.06
NR1D1P20393 RNU1-139P-201ENST00000391307 165 ntBASIC2.21□□□□□ -2.06
NR1D1P20393 RNA5SP201-201ENST00000410316 124 ntBASIC2.21□□□□□ -2.06
NR1D1P20393 AC114482.1-201ENST00000418010 247 ntBASIC2.21□□□□□ -2.06
NR1D1P20393 AC096644.2-201ENST00000429278 159 ntBASIC2.21□□□□□ -2.06
NR1D1P20393 MTCYBP9-201ENST00000431021 303 ntBASIC2.21□□□□□ -2.06
NR1D1P20393 AC009238.1-201ENST00000442165 424 ntBASIC2.21□□□□□ -2.06
NR1D1P20393 AC009237.6-201ENST00000446969 424 ntBASIC2.21□□□□□ -2.06
NR1D1P20393 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.21□□□□□ -2.06
NR1D1P20393 SNORA48.11-201ENST00000517015 89 ntBASIC2.21□□□□□ -2.06
NR1D1P20393 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.21□□□□□ -2.06
NR1D1P20393 AC006600.1-201ENST00000572529 153 ntBASIC2.21□□□□□ -2.06
NR1D1P20393 AC002984.1-201ENST00000591692 448 ntBASIC2.21□□□□□ -2.06
NR1D1P20393 RPL30P11-203ENST00000598995 310 ntBASIC2.21□□□□□ -2.06
NR1D1P20393 AL355297.3-201ENST00000604082 446 ntBASIC2.21□□□□□ -2.06
NR1D1P20393 PCGEM1.1-201ENST00000613431 131 ntBASIC2.21□□□□□ -2.06
NR1D1P20393 U2.1-201ENST00000618978 145 ntBASIC2.21□□□□□ -2.06
NR1D1P20393 7SK.10-201ENST00000621414 298 ntBASIC2.21□□□□□ -2.06
NR1D1P20393 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
NR1D1P20393 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.2□□□□□ -2.06
NR1D1P20393 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
NR1D1P20393 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.2□□□□□ -2.06
NR1D1P20393 RNU6-450P-201ENST00000364654 107 ntBASIC2.2□□□□□ -2.06
NR1D1P20393 Y_RNA.319-201ENST00000365138 92 ntBASIC2.2□□□□□ -2.06
NR1D1P20393 RNU6-541P-201ENST00000384709 110 ntBASIC2.2□□□□□ -2.06
NR1D1P20393 MIR568-201ENST00000385036 95 ntBASIC2.2□□□□□ -2.06
NR1D1P20393 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
NR1D1P20393 MIR320B2-201ENST00000408479 138 ntBASIC2.2□□□□□ -2.06
NR1D1P20393 MIR1252-201ENST00000408861 65 ntBASIC2.2□□□□□ -2.06
NR1D1P20393 RNA5SP270-201ENST00000411361 118 ntBASIC2.2□□□□□ -2.06
NR1D1P20393 AL590556.1-201ENST00000423231 483 ntBASIC2.2□□□□□ -2.06
NR1D1P20393 USP9YP16-201ENST00000430287 407 ntBASIC2.2□□□□□ -2.06
NR1D1P20393 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.2□□□□□ -2.06
NR1D1P20393 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.2□□□□□ -2.06
NR1D1P20393 USP9YP23-201ENST00000455085 407 ntBASIC2.2□□□□□ -2.06
NR1D1P20393 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC2.2□□□□□ -2.06
NR1D1P20393 RNU7-169P-201ENST00000459456 61 ntBASIC2.2□□□□□ -2.06
NR1D1P20393 TOMM22P6-201ENST00000465035 409 ntBASIC2.2□□□□□ -2.06
NR1D1P20393 MTATP8P1-201ENST00000467115 207 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms