Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 AL442163.3-201ENST00000554110 156 ntBASIC1.44□□□□□ -2.18
HLA-DPA1P20036 AL160236.1-201ENST00000556317 195 ntBASIC1.44□□□□□ -2.18
HLA-DPA1P20036 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.44□□□□□ -2.18
HLA-DPA1P20036 AC092954.2-201ENST00000609103 430 ntBASIC1.44□□□□□ -2.18
HLA-DPA1P20036 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.44□□□□□ -2.18
HLA-DPA1P20036 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.44□□□□□ -2.18
HLA-DPA1P20036 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
HLA-DPA1P20036 RNU6-1240P-201ENST00000365155 104 ntBASIC1.43□□□□□ -2.18
HLA-DPA1P20036 RNU6-95P-201ENST00000384697 107 ntBASIC1.43□□□□□ -2.18
HLA-DPA1P20036 MIR513A1-201ENST00000385138 129 ntBASIC1.43□□□□□ -2.18
HLA-DPA1P20036 RNA5SP109-201ENST00000391010 116 ntBASIC1.43□□□□□ -2.18
HLA-DPA1P20036 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
HLA-DPA1P20036 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.43□□□□□ -2.18
HLA-DPA1P20036 SNX2P2-201ENST00000424553 323 ntBASIC1.43□□□□□ -2.18
HLA-DPA1P20036 Z82188.1-201ENST00000436709 154 ntBASIC1.43□□□□□ -2.18
HLA-DPA1P20036 SNRPGP13-201ENST00000442212 177 ntBASIC1.43□□□□□ -2.18
HLA-DPA1P20036 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.43□□□□□ -2.18
HLA-DPA1P20036 RNU6-221P-201ENST00000459541 99 ntBASIC1.43□□□□□ -2.18
HLA-DPA1P20036 RPL30P7-201ENST00000479312 323 ntBASIC1.43□□□□□ -2.18
HLA-DPA1P20036 TRBVA-201ENST00000498804 316 ntBASIC1.43□□□□□ -2.18
HLA-DPA1P20036 AC103851.1-201ENST00000506833 274 ntBASIC1.43□□□□□ -2.18
HLA-DPA1P20036 RNU1-142P-201ENST00000516682 145 ntBASIC1.43□□□□□ -2.18
HLA-DPA1P20036 RNU1-92P-201ENST00000517017 135 ntBASIC1.43□□□□□ -2.18
HLA-DPA1P20036 AC023043.2-201ENST00000589678 1026 ntBASIC1.43□□□□□ -2.18
HLA-DPA1P20036 BNIP3P10-201ENST00000605360 577 ntBASIC1.43□□□□□ -2.18
HLA-DPA1P20036 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.43□□□□□ -2.18
HLA-DPA1P20036 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.43□□□□□ -2.18
HLA-DPA1P20036 SNORD115-8-201ENST00000363856 82 ntBASIC1.42□□□□□ -2.18
HLA-DPA1P20036 SNORD115-38-201ENST00000365037 82 ntBASIC1.42□□□□□ -2.18
HLA-DPA1P20036 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
HLA-DPA1P20036 RPL21P1-201ENST00000399532 476 ntBASIC1.42□□□□□ -2.18
HLA-DPA1P20036 BTF3P4-201ENST00000418852 495 ntBASIC1.42□□□□□ -2.18
HLA-DPA1P20036 AL590632.1-201ENST00000424289 371 ntBASIC1.42□□□□□ -2.18
HLA-DPA1P20036 MTND1P11-201ENST00000456661 876 ntBASIC1.42□□□□□ -2.18
HLA-DPA1P20036 SNORA25.14-201ENST00000516481 132 ntBASIC1.42□□□□□ -2.18
HLA-DPA1P20036 RNU6-58P-201ENST00000517143 103 ntBASIC1.42□□□□□ -2.18
HLA-DPA1P20036 DNAJC19P9-201ENST00000555084 351 ntBASIC1.42□□□□□ -2.18
HLA-DPA1P20036 MIR4742-201ENST00000581069 85 ntBASIC1.42□□□□□ -2.18
HLA-DPA1P20036 AL365434.2-201ENST00000607979 234 ntBASIC1.42□□□□□ -2.18
HLA-DPA1P20036 AC040896.1-201ENST00000613819 479 ntBASIC1.42□□□□□ -2.18
HLA-DPA1P20036 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.42□□□□□ -2.18
HLA-DPA1P20036 SNORD115-32-201ENST00000364079 82 ntBASIC1.41□□□□□ -2.18
HLA-DPA1P20036 Y_RNA.530-201ENST00000384587 101 ntBASIC1.41□□□□□ -2.18
HLA-DPA1P20036 RNU6-950P-201ENST00000384651 107 ntBASIC1.41□□□□□ -2.18
HLA-DPA1P20036 MIR517A-201ENST00000385001 87 ntBASIC1.41□□□□□ -2.18
HLA-DPA1P20036 FGF7P8-201ENST00000402994 292 ntBASIC1.41□□□□□ -2.18
HLA-DPA1P20036 RNA5SP504-201ENST00000410676 117 ntBASIC1.41□□□□□ -2.18
HLA-DPA1P20036 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC1.41□□□□□ -2.18
HLA-DPA1P20036 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.41□□□□□ -2.18
HLA-DPA1P20036 DAP3P1-201ENST00000441522 278 ntBASIC1.41□□□□□ -2.18
HLA-DPA1P20036 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.41□□□□□ -2.18
HLA-DPA1P20036 AC009474.2-201ENST00000451383 136 ntBASIC1.41□□□□□ -2.18
HLA-DPA1P20036 HMGN2P26-201ENST00000463169 339 ntBASIC1.41□□□□□ -2.18
HLA-DPA1P20036 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.41□□□□□ -2.18
HLA-DPA1P20036 ACA59.1-201ENST00000515966 143 ntBASIC1.41□□□□□ -2.18
HLA-DPA1P20036 AL161670.1-201ENST00000554348 137 ntBASIC1.41□□□□□ -2.18
HLA-DPA1P20036 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.41□□□□□ -2.18
HLA-DPA1P20036 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.41□□□□□ -2.18
HLA-DPA1P20036 AL359075.3-201ENST00000613288 217 ntBASIC1.41□□□□□ -2.18
HLA-DPA1P20036 AL138726.1-201ENST00000614873 333 ntBASIC1.41□□□□□ -2.18
HLA-DPA1P20036 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.41□□□□□ -2.18
HLA-DPA1P20036 ZNF209P-201ENST00000593450 2304 ntBASIC1.4□□□□□ -2.18
HLA-DPA1P20036 Y_RNA.256-201ENST00000364594 104 ntBASIC1.4□□□□□ -2.19
HLA-DPA1P20036 Y_RNA.319-201ENST00000365138 92 ntBASIC1.4□□□□□ -2.19
HLA-DPA1P20036 RNA5SP259-201ENST00000365541 109 ntBASIC1.4□□□□□ -2.19
HLA-DPA1P20036 Y_RNA.559-201ENST00000384686 107 ntBASIC1.4□□□□□ -2.19
HLA-DPA1P20036 MIR153-2-201ENST00000385225 87 ntBASIC1.4□□□□□ -2.19
HLA-DPA1P20036 Y_RNA.595-201ENST00000410403 105 ntBASIC1.4□□□□□ -2.19
HLA-DPA1P20036 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.4□□□□□ -2.19
HLA-DPA1P20036 MTCO3P18-201ENST00000440206 761 ntBASIC1.4□□□□□ -2.19
HLA-DPA1P20036 RNU7-95P-201ENST00000459222 64 ntBASIC1.4□□□□□ -2.19
HLA-DPA1P20036 RNU6-256P-201ENST00000516747 97 ntBASIC1.4□□□□□ -2.19
HLA-DPA1P20036 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.4□□□□□ -2.19
HLA-DPA1P20036 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.4□□□□□ -2.19
HLA-DPA1P20036 RAB11AP2-201ENST00000545905 639 ntBASIC1.4□□□□□ -2.19
HLA-DPA1P20036 AC019288.1-201ENST00000557918 224 ntBASIC1.4□□□□□ -2.19
HLA-DPA1P20036 CYP3A52P-201ENST00000563326 91 ntBASIC1.4□□□□□ -2.19
HLA-DPA1P20036 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.4□□□□□ -2.19
HLA-DPA1P20036 AL929325.1-201ENST00000603096 117 ntBASIC1.4□□□□□ -2.19
HLA-DPA1P20036 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.4□□□□□ -2.19
HLA-DPA1P20036 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
HLA-DPA1P20036 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
HLA-DPA1P20036 RNU6-1123P-201ENST00000362347 106 ntBASIC1.39□□□□□ -2.19
HLA-DPA1P20036 RNU1-62P-201ENST00000362599 164 ntBASIC1.39□□□□□ -2.19
HLA-DPA1P20036 Y_RNA.38-201ENST00000362617 102 ntBASIC1.39□□□□□ -2.19
HLA-DPA1P20036 RNY3P3-201ENST00000363816 102 ntBASIC1.39□□□□□ -2.19
HLA-DPA1P20036 SNORD87-201ENST00000364849 89 ntBASIC1.39□□□□□ -2.19
HLA-DPA1P20036 Y_RNA.338-201ENST00000365320 114 ntBASIC1.39□□□□□ -2.19
HLA-DPA1P20036 RNU6-541P-201ENST00000384709 110 ntBASIC1.39□□□□□ -2.19
HLA-DPA1P20036 RNU6-332P-201ENST00000391193 108 ntBASIC1.39□□□□□ -2.19
HLA-DPA1P20036 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.39□□□□□ -2.19
HLA-DPA1P20036 AP1B1P2-201ENST00000416196 106 ntBASIC1.39□□□□□ -2.19
HLA-DPA1P20036 ZNF885P-201ENST00000420174 1098 ntBASIC1.39□□□□□ -2.19
HLA-DPA1P20036 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.39□□□□□ -2.19
HLA-DPA1P20036 RNA5SP454-201ENST00000517231 127 ntBASIC1.39□□□□□ -2.19
HLA-DPA1P20036 snoU13.31-201ENST00000607291 104 ntBASIC1.39□□□□□ -2.19
HLA-DPA1P20036 AC019193.3-201ENST00000609144 554 ntBASIC1.39□□□□□ -2.19
HLA-DPA1P20036 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.39□□□□□ -2.19
HLA-DPA1P20036 MIR1321-201ENST00000637766 79 ntBASIC1.39□□□□□ -2.19
HLA-DPA1P20036 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms