Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 RPS3AP17-201ENST00000472594 777 ntBASIC0.72□□□□□ -2.29
CTLA4P16410 MTCO1P29-201ENST00000496868 288 ntBASIC0.72□□□□□ -2.29
CTLA4P16410 Y_RNA.654-201ENST00000497848 106 ntBASIC0.72□□□□□ -2.29
CTLA4P16410 RNA5SP401-201ENST00000515920 127 ntBASIC0.72□□□□□ -2.29
CTLA4P16410 RNU6-351P-201ENST00000516097 100 ntBASIC0.72□□□□□ -2.29
CTLA4P16410 SNORA31.10-201ENST00000516482 106 ntBASIC0.72□□□□□ -2.29
CTLA4P16410 RNU6-1038P-201ENST00000516516 104 ntBASIC0.72□□□□□ -2.29
CTLA4P16410 RNU6-113P-201ENST00000516653 101 ntBASIC0.72□□□□□ -2.29
CTLA4P16410 RNU1-142P-201ENST00000516682 145 ntBASIC0.72□□□□□ -2.29
CTLA4P16410 SUMO2P16-201ENST00000519475 264 ntBASIC0.72□□□□□ -2.29
CTLA4P16410 MTND1P35-201ENST00000526739 508 ntBASIC0.72□□□□□ -2.29
CTLA4P16410 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.72□□□□□ -2.29
CTLA4P16410 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.72□□□□□ -2.29
CTLA4P16410 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.72□□□□□ -2.29
CTLA4P16410 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.72□□□□□ -2.29
CTLA4P16410 AC146944.4-201ENST00000602697 718 ntBASIC0.72□□□□□ -2.29
CTLA4P16410 AC013244.2-201ENST00000603396 103 ntBASIC0.72□□□□□ -2.29
CTLA4P16410 AL121757.2-201ENST00000611223 313 ntBASIC0.72□□□□□ -2.29
CTLA4P16410 AL359075.3-201ENST00000613288 217 ntBASIC0.72□□□□□ -2.29
CTLA4P16410 AC068792.1-201ENST00000621354 417 ntBASIC0.72□□□□□ -2.29
CTLA4P16410 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.72□□□□□ -2.29
CTLA4P16410 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC0.72□□□□□ -2.29
CTLA4P16410 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.71□□□□□ -2.3
CTLA4P16410 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.71□□□□□ -2.3
CTLA4P16410 MIR96-201ENST00000362288 78 ntBASIC0.71□□□□□ -2.3
CTLA4P16410 Y_RNA.296-201ENST00000364930 108 ntBASIC0.71□□□□□ -2.3
CTLA4P16410 Y_RNA.381-201ENST00000365666 102 ntBASIC0.71□□□□□ -2.3
CTLA4P16410 RNU6-214P-201ENST00000384130 107 ntBASIC0.71□□□□□ -2.3
CTLA4P16410 SNORD37.1-201ENST00000390968 65 ntBASIC0.71□□□□□ -2.3
CTLA4P16410 RN7SKP200-201ENST00000410564 320 ntBASIC0.71□□□□□ -2.3
CTLA4P16410 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC0.71□□□□□ -2.3
CTLA4P16410 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.71□□□□□ -2.3
CTLA4P16410 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.71□□□□□ -2.3
CTLA4P16410 AL606517.2-201ENST00000442855 241 ntBASIC0.71□□□□□ -2.3
CTLA4P16410 RNU6-956P-201ENST00000458868 103 ntBASIC0.71□□□□□ -2.3
CTLA4P16410 RPL23AP75-201ENST00000491601 451 ntBASIC0.71□□□□□ -2.3
CTLA4P16410 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC0.71□□□□□ -2.3
CTLA4P16410 RN7SKP298-201ENST00000515950 94 ntBASIC0.71□□□□□ -2.3
CTLA4P16410 SNORA19.2-201ENST00000516013 114 ntBASIC0.71□□□□□ -2.3
CTLA4P16410 RNA5SP54-201ENST00000516951 92 ntBASIC0.71□□□□□ -2.3
CTLA4P16410 RNU6-165P-201ENST00000517170 99 ntBASIC0.71□□□□□ -2.3
CTLA4P16410 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.71□□□□□ -2.3
CTLA4P16410 AL390123.1-201ENST00000603216 237 ntBASIC0.71□□□□□ -2.3
CTLA4P16410 AC022217.4-201ENST00000604389 163 ntBASIC0.71□□□□□ -2.3
CTLA4P16410 AC121247.2-201ENST00000604776 136 ntBASIC0.71□□□□□ -2.3
CTLA4P16410 AP001330.5-201ENST00000607176 411 ntBASIC0.71□□□□□ -2.3
CTLA4P16410 AC097065.2-201ENST00000608159 533 ntBASIC0.71□□□□□ -2.3
CTLA4P16410 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC0.71□□□□□ -2.3
CTLA4P16410 Z69908.1-201ENST00000622603 247 ntBASIC0.71□□□□□ -2.3
CTLA4P16410 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
CTLA4P16410 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.7□□□□□ -2.3
CTLA4P16410 ZNF204P-201ENST00000416749 2397 ntBASIC0.7□□□□□ -2.3
CTLA4P16410 MIR373-201ENST00000362273 69 ntBASIC0.7□□□□□ -2.3
CTLA4P16410 RNU1-36P-201ENST00000365130 165 ntBASIC0.7□□□□□ -2.3
CTLA4P16410 RNU4-66P-201ENST00000365199 138 ntBASIC0.7□□□□□ -2.3
CTLA4P16410 RNU6-245P-201ENST00000384020 107 ntBASIC0.7□□□□□ -2.3
CTLA4P16410 EIF4E2P1-201ENST00000393781 255 ntBASIC0.7□□□□□ -2.3
CTLA4P16410 MIR450B-201ENST00000401182 78 ntBASIC0.7□□□□□ -2.3
CTLA4P16410 AC010154.1-201ENST00000425857 269 ntBASIC0.7□□□□□ -2.3
CTLA4P16410 TIMM9P3-201ENST00000428659 274 ntBASIC0.7□□□□□ -2.3
CTLA4P16410 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.7□□□□□ -2.3
CTLA4P16410 MRPS10P2-201ENST00000431226 381 ntBASIC0.7□□□□□ -2.3
CTLA4P16410 MTCO2P16-201ENST00000436962 677 ntBASIC0.7□□□□□ -2.3
CTLA4P16410 HSPE1P13-201ENST00000451143 297 ntBASIC0.7□□□□□ -2.3
CTLA4P16410 RNU6-261P-201ENST00000459506 102 ntBASIC0.7□□□□□ -2.3
CTLA4P16410 RNU6-1208P-201ENST00000459588 107 ntBASIC0.7□□□□□ -2.3
CTLA4P16410 AC083798.1-201ENST00000472671 131 ntBASIC0.7□□□□□ -2.3
CTLA4P16410 AC103851.1-201ENST00000506833 274 ntBASIC0.7□□□□□ -2.3
CTLA4P16410 AC091133.4-201ENST00000511142 308 ntBASIC0.7□□□□□ -2.3
CTLA4P16410 RNA5SP102-201ENST00000516865 106 ntBASIC0.7□□□□□ -2.3
CTLA4P16410 AC104383.1-201ENST00000530297 370 ntBASIC0.7□□□□□ -2.3
CTLA4P16410 AC092807.2-201ENST00000609367 243 ntBASIC0.7□□□□□ -2.3
CTLA4P16410 DLEU2_1.1-201ENST00000612089 120 ntBASIC0.7□□□□□ -2.3
CTLA4P16410 DLEU2_1.2-201ENST00000614667 120 ntBASIC0.7□□□□□ -2.3
CTLA4P16410 AC068647.2-201ENST00000637380 353 ntBASIC0.7□□□□□ -2.3
CTLA4P16410 Y_RNA.167-201ENST00000363735 109 ntBASIC0.69□□□□□ -2.3
CTLA4P16410 SNORD115-8-201ENST00000363856 82 ntBASIC0.69□□□□□ -2.3
CTLA4P16410 SNORD115-38-201ENST00000365037 82 ntBASIC0.69□□□□□ -2.3
CTLA4P16410 RNU4-20P-201ENST00000365601 151 ntBASIC0.69□□□□□ -2.3
CTLA4P16410 MIR19B1-201ENST00000384829 87 ntBASIC0.69□□□□□ -2.3
CTLA4P16410 MIR521-1-201ENST00000384902 87 ntBASIC0.69□□□□□ -2.3
CTLA4P16410 RNU11-5P-201ENST00000391216 129 ntBASIC0.69□□□□□ -2.3
CTLA4P16410 RNA5SP504-201ENST00000410676 117 ntBASIC0.69□□□□□ -2.3
CTLA4P16410 RNU4-55P-201ENST00000410731 137 ntBASIC0.69□□□□□ -2.3
CTLA4P16410 MTCO1P20-201ENST00000425366 358 ntBASIC0.69□□□□□ -2.3
CTLA4P16410 NDUFB4P10-201ENST00000452541 359 ntBASIC0.69□□□□□ -2.3
CTLA4P16410 SRRM1P2-201ENST00000464531 1192 ntBASIC0.69□□□□□ -2.3
CTLA4P16410 BET1P1-201ENST00000482276 359 ntBASIC0.69□□□□□ -2.3
CTLA4P16410 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.69□□□□□ -2.3
CTLA4P16410 MTND1P5-201ENST00000517906 940 ntBASIC0.69□□□□□ -2.3
CTLA4P16410 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.69□□□□□ -2.3
CTLA4P16410 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.69□□□□□ -2.3
CTLA4P16410 AC004584.2-201ENST00000570407 410 ntBASIC0.69□□□□□ -2.3
CTLA4P16410 SNORD11B-201ENST00000607707 90 ntBASIC0.69□□□□□ -2.3
CTLA4P16410 AL021879.1-201ENST00000611756 288 ntBASIC0.69□□□□□ -2.3
CTLA4P16410 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.69□□□□□ -2.3
CTLA4P16410 MIR8054-201ENST00000620877 86 ntBASIC0.69□□□□□ -2.3
CTLA4P16410 AC121333.1-201ENST00000567488 2709 ntBASIC0.69□□□□□ -2.3
CTLA4P16410 RNU6-1322P-201ENST00000364309 107 ntBASIC0.68□□□□□ -2.3
CTLA4P16410 RNU6-933P-201ENST00000384424 107 ntBASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms