Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC-0.55□□□□□ -2.5
HIST1H1DP16402 AL445523.1-201ENST00000451184 1362 ntBASIC-0.56□□□□□ -2.5
HIST1H1DP16402 AC073343.1-201ENST00000328239 651 ntBASIC-0.56□□□□□ -2.5
HIST1H1DP16402 RNU6-609P-201ENST00000365459 107 ntBASIC-0.56□□□□□ -2.5
HIST1H1DP16402 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.56□□□□□ -2.5
HIST1H1DP16402 HSFY5P-201ENST00000453726 309 ntBASIC-0.56□□□□□ -2.5
HIST1H1DP16402 MTCO3P27-201ENST00000514397 196 ntBASIC-0.56□□□□□ -2.5
HIST1H1DP16402 AC105185.1-201ENST00000518705 535 ntBASIC-0.56□□□□□ -2.5
HIST1H1DP16402 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC-0.56□□□□□ -2.5
HIST1H1DP16402 AK6P2-201ENST00000549020 471 ntBASIC-0.56□□□□□ -2.5
HIST1H1DP16402 MIR4764-201ENST00000580680 88 ntBASIC-0.56□□□□□ -2.5
HIST1H1DP16402 RSL24D1P11-201ENST00000591045 491 ntBASIC-0.56□□□□□ -2.5
HIST1H1DP16402 AC098679.4-201ENST00000624241 654 ntBASIC-0.56□□□□□ -2.5
HIST1H1DP16402 snoZ196.1-201ENST00000625269 89 ntBASIC-0.56□□□□□ -2.5
HIST1H1DP16402 RNU4-41P-201ENST00000364426 143 ntBASIC-0.57□□□□□ -2.5
HIST1H1DP16402 Y_RNA.311-201ENST00000365068 96 ntBASIC-0.57□□□□□ -2.5
HIST1H1DP16402 MIR106A-201ENST00000384870 81 ntBASIC-0.57□□□□□ -2.5
HIST1H1DP16402 RNU6-1186P-201ENST00000410429 97 ntBASIC-0.57□□□□□ -2.5
HIST1H1DP16402 AC009237.7-201ENST00000447357 229 ntBASIC-0.57□□□□□ -2.5
HIST1H1DP16402 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC-0.57□□□□□ -2.5
HIST1H1DP16402 RNU6-221P-201ENST00000459541 99 ntBASIC-0.57□□□□□ -2.5
HIST1H1DP16402 SCARNA8-201ENST00000515924 131 ntBASIC-0.57□□□□□ -2.5
HIST1H1DP16402 RN7SKP287-201ENST00000516546 266 ntBASIC-0.57□□□□□ -2.5
HIST1H1DP16402 RNU7-51P-201ENST00000516560 62 ntBASIC-0.57□□□□□ -2.5
HIST1H1DP16402 RNU2-46P-201ENST00000517038 113 ntBASIC-0.57□□□□□ -2.5
HIST1H1DP16402 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC-0.57□□□□□ -2.5
HIST1H1DP16402 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC-0.57□□□□□ -2.5
HIST1H1DP16402 AP002802.2-201ENST00000605877 235 ntBASIC-0.57□□□□□ -2.5
HIST1H1DP16402 TCL6_2.1-201ENST00000615162 119 ntBASIC-0.57□□□□□ -2.5
HIST1H1DP16402 U6.73-201ENST00000619194 103 ntBASIC-0.57□□□□□ -2.5
HIST1H1DP16402 SNORA1.1-201ENST00000364671 133 ntBASIC-0.58□□□□□ -2.5
HIST1H1DP16402 SNORA2A-201ENST00000383885 135 ntBASIC-0.58□□□□□ -2.5
HIST1H1DP16402 SNORA36A-201ENST00000384221 132 ntBASIC-0.58□□□□□ -2.5
HIST1H1DP16402 RNU6-1093P-201ENST00000391194 107 ntBASIC-0.58□□□□□ -2.5
HIST1H1DP16402 MIR892B-201ENST00000401279 77 ntBASIC-0.58□□□□□ -2.5
HIST1H1DP16402 RNA5SP95-201ENST00000410319 137 ntBASIC-0.58□□□□□ -2.5
HIST1H1DP16402 USP9YP29-201ENST00000445112 563 ntBASIC-0.58□□□□□ -2.5
HIST1H1DP16402 snoU13.21-201ENST00000459368 105 ntBASIC-0.58□□□□□ -2.5
HIST1H1DP16402 RNU7-57P-201ENST00000459540 60 ntBASIC-0.58□□□□□ -2.5
HIST1H1DP16402 MTND3P25-201ENST00000509243 135 ntBASIC-0.58□□□□□ -2.5
HIST1H1DP16402 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC-0.58□□□□□ -2.5
HIST1H1DP16402 AC073539.2-201ENST00000597113 165 ntBASIC-0.58□□□□□ -2.5
HIST1H1DP16402 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC-0.58□□□□□ -2.5
HIST1H1DP16402 AC108747.1-201ENST00000609508 535 ntBASIC-0.58□□□□□ -2.5
HIST1H1DP16402 AC008250.2-201ENST00000615261 205 ntBASIC-0.58□□□□□ -2.5
HIST1H1DP16402 RNU6-833P-201ENST00000363486 107 ntBASIC-0.59□□□□□ -2.5
HIST1H1DP16402 RNA5SP275-201ENST00000363936 118 ntBASIC-0.59□□□□□ -2.5
HIST1H1DP16402 Y_RNA.796-201ENST00000364268 102 ntBASIC-0.59□□□□□ -2.5
HIST1H1DP16402 Y_RNA.265-201ENST00000364677 108 ntBASIC-0.59□□□□□ -2.5
HIST1H1DP16402 Y_RNA.799-201ENST00000364992 102 ntBASIC-0.59□□□□□ -2.5
HIST1H1DP16402 Y_RNA.504-201ENST00000384481 104 ntBASIC-0.59□□□□□ -2.5
HIST1H1DP16402 RNU6-1304P-201ENST00000411374 106 ntBASIC-0.59□□□□□ -2.5
HIST1H1DP16402 TRIM60P10Y-201ENST00000425589 751 ntBASIC-0.59□□□□□ -2.5
HIST1H1DP16402 MTND4LP16-201ENST00000440828 295 ntBASIC-0.59□□□□□ -2.5
HIST1H1DP16402 AL392103.1-201ENST00000447000 198 ntBASIC-0.59□□□□□ -2.5
HIST1H1DP16402 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC-0.59□□□□□ -2.5
HIST1H1DP16402 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC-0.59□□□□□ -2.5
HIST1H1DP16402 HMGN1P10-201ENST00000474557 553 ntBASIC-0.59□□□□□ -2.5
HIST1H1DP16402 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC-0.59□□□□□ -2.5
HIST1H1DP16402 AP001372.4-201ENST00000524889 472 ntBASIC-0.59□□□□□ -2.5
HIST1H1DP16402 MIR5006-201ENST00000583027 110 ntBASIC-0.59□□□□□ -2.5
HIST1H1DP16402 AC005730.3-201ENST00000583067 366 ntBASIC-0.59□□□□□ -2.5
HIST1H1DP16402 AC024060.1-201ENST00000607052 494 ntBASIC-0.59□□□□□ -2.5
HIST1H1DP16402 SNORA43.4-201ENST00000629559 138 ntBASIC-0.59□□□□□ -2.5
HIST1H1DP16402 MIRLET7C-201ENST00000362160 84 ntBASIC-0.6□□□□□ -2.51
HIST1H1DP16402 RNU6-1097P-201ENST00000363586 107 ntBASIC-0.6□□□□□ -2.51
HIST1H1DP16402 Y_RNA.355-201ENST00000365462 98 ntBASIC-0.6□□□□□ -2.51
HIST1H1DP16402 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.6□□□□□ -2.51
HIST1H1DP16402 SNORA2B-201ENST00000384583 137 ntBASIC-0.6□□□□□ -2.51
HIST1H1DP16402 SNORA40.2-201ENST00000390847 128 ntBASIC-0.6□□□□□ -2.51
HIST1H1DP16402 RNU6-613P-201ENST00000410412 108 ntBASIC-0.6□□□□□ -2.51
HIST1H1DP16402 RNU4-46P-201ENST00000410818 138 ntBASIC-0.6□□□□□ -2.51
HIST1H1DP16402 AC096531.1-201ENST00000419107 107 ntBASIC-0.6□□□□□ -2.51
HIST1H1DP16402 AC004386.2-201ENST00000441858 148 ntBASIC-0.6□□□□□ -2.51
HIST1H1DP16402 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC-0.6□□□□□ -2.51
HIST1H1DP16402 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC-0.6□□□□□ -2.51
HIST1H1DP16402 AC023050.3-201ENST00000541142 333 ntBASIC-0.6□□□□□ -2.51
HIST1H1DP16402 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC-0.6□□□□□ -2.51
HIST1H1DP16402 AL670379.3-201ENST00000605040 251 ntBASIC-0.6□□□□□ -2.51
HIST1H1DP16402 AC091965.4-201ENST00000607691 587 ntBASIC-0.6□□□□□ -2.51
HIST1H1DP16402 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC-0.6□□□□□ -2.51
HIST1H1DP16402 AC008873.1-201ENST00000625051 138 ntBASIC-0.6□□□□□ -2.51
HIST1H1DP16402 RNY4P24-201ENST00000362735 96 ntBASIC-0.61□□□□□ -2.51
HIST1H1DP16402 SNORA18.1-201ENST00000363418 128 ntBASIC-0.61□□□□□ -2.51
HIST1H1DP16402 Y_RNA.168-201ENST00000363740 102 ntBASIC-0.61□□□□□ -2.51
HIST1H1DP16402 Y_RNA.269-201ENST00000364685 89 ntBASIC-0.61□□□□□ -2.51
HIST1H1DP16402 SNORD114-12-201ENST00000365400 75 ntBASIC-0.61□□□□□ -2.51
HIST1H1DP16402 ZNF736P7Y-201ENST00000425158 820 ntBASIC-0.61□□□□□ -2.51
HIST1H1DP16402 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC-0.61□□□□□ -2.51
HIST1H1DP16402 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC-0.61□□□□□ -2.51
HIST1H1DP16402 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC-0.61□□□□□ -2.51
HIST1H1DP16402 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC-0.61□□□□□ -2.51
HIST1H1DP16402 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC-0.61□□□□□ -2.51
HIST1H1DP16402 AC107401.1-201ENST00000503426 685 ntBASIC-0.61□□□□□ -2.51
HIST1H1DP16402 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC-0.61□□□□□ -2.51
HIST1H1DP16402 RNU7-41P-201ENST00000515917 61 ntBASIC-0.61□□□□□ -2.51
HIST1H1DP16402 AC068587.4-201ENST00000533893 186 ntBASIC-0.61□□□□□ -2.51
HIST1H1DP16402 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.61□□□□□ -2.51
HIST1H1DP16402 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC-0.61□□□□□ -2.51
HIST1H1DP16402 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC-0.61□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms