Protein–RNA interactions for Protein: P0DKX0

ZNF728, Zinc finger protein 728, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF728P0DKX0 RMST_3.1-201ENST00000611651 109 ntBASIC0.51□□□□□ -2.33
ZNF728P0DKX0 AC073349.3-201ENST00000617616 186 ntBASIC0.51□□□□□ -2.33
ZNF728P0DKX0 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.51□□□□□ -2.33
ZNF728P0DKX0 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.51□□□□□ -2.33
ZNF728P0DKX0 SCARNA4-201ENST00000629045 128 ntBASIC0.51□□□□□ -2.33
ZNF728P0DKX0 AL390237.1-201ENST00000404226 1415 ntBASIC0.5□□□□□ -2.33
ZNF728P0DKX0 Y_RNA.123-201ENST00000363338 102 ntBASIC0.5□□□□□ -2.33
ZNF728P0DKX0 RNU4-76P-201ENST00000364509 141 ntBASIC0.5□□□□□ -2.33
ZNF728P0DKX0 Y_RNA.363-201ENST00000365529 113 ntBASIC0.5□□□□□ -2.33
ZNF728P0DKX0 MIR660-201ENST00000385235 97 ntBASIC0.5□□□□□ -2.33
ZNF728P0DKX0 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC0.5□□□□□ -2.33
ZNF728P0DKX0 RNA5SP219-201ENST00000390940 113 ntBASIC0.5□□□□□ -2.33
ZNF728P0DKX0 AF228730.1-201ENST00000397972 663 ntBASIC0.5□□□□□ -2.33
ZNF728P0DKX0 AL034345.1-201ENST00000407768 123 ntBASIC0.5□□□□□ -2.33
ZNF728P0DKX0 MIR320B2-201ENST00000408479 138 ntBASIC0.5□□□□□ -2.33
ZNF728P0DKX0 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.5□□□□□ -2.33
ZNF728P0DKX0 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.5□□□□□ -2.33
ZNF728P0DKX0 SNORA14.1-201ENST00000516113 141 ntBASIC0.5□□□□□ -2.33
ZNF728P0DKX0 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
ZNF728P0DKX0 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.5□□□□□ -2.33
ZNF728P0DKX0 AC025423.5-201ENST00000550230 219 ntBASIC0.5□□□□□ -2.33
ZNF728P0DKX0 AL137100.2-201ENST00000555786 315 ntBASIC0.5□□□□□ -2.33
ZNF728P0DKX0 AC004584.2-201ENST00000570407 410 ntBASIC0.5□□□□□ -2.33
ZNF728P0DKX0 FGF7P1-201ENST00000582820 288 ntBASIC0.5□□□□□ -2.33
ZNF728P0DKX0 AC022432.1-201ENST00000595739 310 ntBASIC0.5□□□□□ -2.33
ZNF728P0DKX0 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.5□□□□□ -2.33
ZNF728P0DKX0 AC064836.2-201ENST00000609491 462 ntBASIC0.5□□□□□ -2.33
ZNF728P0DKX0 HULC.1-201ENST00000612720 240 ntBASIC0.5□□□□□ -2.33
ZNF728P0DKX0 uc_338.34-201ENST00000617467 174 ntBASIC0.5□□□□□ -2.33
ZNF728P0DKX0 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.5□□□□□ -2.33
ZNF728P0DKX0 Y_RNA.201-201ENST00000364052 96 ntBASIC0.49□□□□□ -2.33
ZNF728P0DKX0 Y_RNA.226-201ENST00000364337 114 ntBASIC0.49□□□□□ -2.33
ZNF728P0DKX0 RNU6-1317P-201ENST00000364582 104 ntBASIC0.49□□□□□ -2.33
ZNF728P0DKX0 MIR653-201ENST00000385279 96 ntBASIC0.49□□□□□ -2.33
ZNF728P0DKX0 SNORD41-201ENST00000386967 70 ntBASIC0.49□□□□□ -2.33
ZNF728P0DKX0 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
ZNF728P0DKX0 MIR1287-201ENST00000408492 90 ntBASIC0.49□□□□□ -2.33
ZNF728P0DKX0 MTATP6P18-201ENST00000417994 673 ntBASIC0.49□□□□□ -2.33
ZNF728P0DKX0 MTCYBP8-201ENST00000422855 651 ntBASIC0.49□□□□□ -2.33
ZNF728P0DKX0 MTCO2P11-201ENST00000431069 680 ntBASIC0.49□□□□□ -2.33
ZNF728P0DKX0 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.49□□□□□ -2.33
ZNF728P0DKX0 SNRPGP9-201ENST00000456025 225 ntBASIC0.49□□□□□ -2.33
ZNF728P0DKX0 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC0.49□□□□□ -2.33
ZNF728P0DKX0 CCDC34P1-201ENST00000507441 517 ntBASIC0.49□□□□□ -2.33
ZNF728P0DKX0 RNU6-344P-201ENST00000516635 111 ntBASIC0.49□□□□□ -2.33
ZNF728P0DKX0 RNU7-128P-201ENST00000517247 62 ntBASIC0.49□□□□□ -2.33
ZNF728P0DKX0 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC0.49□□□□□ -2.33
ZNF728P0DKX0 MTND4P7-201ENST00000523876 130 ntBASIC0.49□□□□□ -2.33
ZNF728P0DKX0 MDM2-233ENST00000545204 398 ntTSL 5 BASIC0.49□□□□□ -2.33
ZNF728P0DKX0 MIR3915-201ENST00000578518 97 ntBASIC0.49□□□□□ -2.33
ZNF728P0DKX0 MIR4714-201ENST00000580728 77 ntBASIC0.49□□□□□ -2.33
ZNF728P0DKX0 AC080078.2-201ENST00000603766 501 ntBASIC0.49□□□□□ -2.33
ZNF728P0DKX0 AL078603.1-201ENST00000603824 313 ntBASIC0.49□□□□□ -2.33
ZNF728P0DKX0 AC007494.3-201ENST00000624660 743 ntBASIC0.49□□□□□ -2.33
ZNF728P0DKX0 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
ZNF728P0DKX0 RNU5A-2P-201ENST00000384337 116 ntBASIC0.48□□□□□ -2.33
ZNF728P0DKX0 SNORA80D-201ENST00000384488 135 ntBASIC0.48□□□□□ -2.33
ZNF728P0DKX0 RNY3P10-201ENST00000384764 102 ntBASIC0.48□□□□□ -2.33
ZNF728P0DKX0 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.48□□□□□ -2.33
ZNF728P0DKX0 RNU6-1186P-201ENST00000410429 97 ntBASIC0.48□□□□□ -2.33
ZNF728P0DKX0 RPS3AP1-201ENST00000413190 320 ntBASIC0.48□□□□□ -2.33
ZNF728P0DKX0 MTND2P18-201ENST00000419962 1030 ntBASIC0.48□□□□□ -2.33
ZNF728P0DKX0 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC0.48□□□□□ -2.33
ZNF728P0DKX0 RNU6-947P-201ENST00000516264 106 ntBASIC0.48□□□□□ -2.33
ZNF728P0DKX0 RNU1-117P-201ENST00000517041 158 ntBASIC0.48□□□□□ -2.33
ZNF728P0DKX0 AC060788.1-201ENST00000521318 469 ntBASIC0.48□□□□□ -2.33
ZNF728P0DKX0 AC104576.1-201ENST00000524225 88 ntBASIC0.48□□□□□ -2.33
ZNF728P0DKX0 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
ZNF728P0DKX0 SCOCP1-201ENST00000554676 349 ntBASIC0.48□□□□□ -2.33
ZNF728P0DKX0 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.48□□□□□ -2.33
ZNF728P0DKX0 MIR4778-201ENST00000577635 80 ntBASIC0.48□□□□□ -2.33
ZNF728P0DKX0 AL162424.1-201ENST00000602325 221 ntBASIC0.48□□□□□ -2.33
ZNF728P0DKX0 AC068790.6-201ENST00000602558 258 ntBASIC0.48□□□□□ -2.33
ZNF728P0DKX0 AL136370.1-201ENST00000608166 691 ntBASIC0.48□□□□□ -2.33
ZNF728P0DKX0 uc_338.17-201ENST00000619633 179 ntBASIC0.48□□□□□ -2.33
ZNF728P0DKX0 FER-210ENST00000628534 558 ntTSL 5 BASIC0.48□□□□□ -2.33
ZNF728P0DKX0 OR5AK4P-201ENST00000635912 903 ntBASIC0.48□□□□□ -2.33
ZNF728P0DKX0 ZNF204P-201ENST00000416749 2397 ntBASIC0.48□□□□□ -2.33
ZNF728P0DKX0 RNU6-199P-201ENST00000362954 107 ntBASIC0.47□□□□□ -2.33
ZNF728P0DKX0 RNU6-969P-201ENST00000383900 105 ntBASIC0.47□□□□□ -2.33
ZNF728P0DKX0 MT-TH-201ENST00000387441 69 ntBASIC0.47□□□□□ -2.33
ZNF728P0DKX0 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC0.47□□□□□ -2.33
ZNF728P0DKX0 MIR942-201ENST00000401111 86 ntBASIC0.47□□□□□ -2.33
ZNF728P0DKX0 RNA5SP504-201ENST00000410676 117 ntBASIC0.47□□□□□ -2.33
ZNF728P0DKX0 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.47□□□□□ -2.33
ZNF728P0DKX0 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.47□□□□□ -2.33
ZNF728P0DKX0 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.47□□□□□ -2.33
ZNF728P0DKX0 AC073415.1-201ENST00000449240 153 ntBASIC0.47□□□□□ -2.33
ZNF728P0DKX0 RNU7-63P-201ENST00000459054 62 ntBASIC0.47□□□□□ -2.33
ZNF728P0DKX0 RPS26P48-201ENST00000491713 339 ntBASIC0.47□□□□□ -2.33
ZNF728P0DKX0 RNU6-1223P-201ENST00000517124 104 ntBASIC0.47□□□□□ -2.33
ZNF728P0DKX0 AC087854.1-201ENST00000519706 414 ntBASIC0.47□□□□□ -2.33
ZNF728P0DKX0 AP003484.1-201ENST00000530974 250 ntBASIC0.47□□□□□ -2.33
ZNF728P0DKX0 AC090049.2-201ENST00000550377 109 ntBASIC0.47□□□□□ -2.33
ZNF728P0DKX0 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC0.47□□□□□ -2.33
ZNF728P0DKX0 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.47□□□□□ -2.33
ZNF728P0DKX0 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.47□□□□□ -2.33
ZNF728P0DKX0 MIR5000-201ENST00000577717 103 ntBASIC0.47□□□□□ -2.33
ZNF728P0DKX0 MIR3913-1-201ENST00000577744 102 ntBASIC0.47□□□□□ -2.33
ZNF728P0DKX0 AC072046.2-201ENST00000618366 268 ntBASIC0.47□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 251.8 ms