Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.44□□□□□ -2.02
HMGB1P09429 MIR4709-201ENST00000577272 72 ntBASIC2.44□□□□□ -2.02
HMGB1P09429 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC2.44□□□□□ -2.02
HMGB1P09429 MIR4422-201ENST00000581938 83 ntBASIC2.44□□□□□ -2.02
HMGB1P09429 AC018462.2-201ENST00000605375 395 ntBASIC2.44□□□□□ -2.02
HMGB1P09429 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
HMGB1P09429 MIR1185-2-201ENST00000408687 86 ntBASIC2.43□□□□□ -2.02
HMGB1P09429 AC074085.1-201ENST00000413598 418 ntBASIC2.43□□□□□ -2.02
HMGB1P09429 Z98742.3-201ENST00000418637 326 ntBASIC2.43□□□□□ -2.02
HMGB1P09429 AC096638.1-201ENST00000444678 216 ntBASIC2.43□□□□□ -2.02
HMGB1P09429 AL163195.1-201ENST00000496941 348 ntBASIC2.43□□□□□ -2.02
HMGB1P09429 RNU6-1016P-201ENST00000516689 94 ntBASIC2.43□□□□□ -2.02
HMGB1P09429 IGKV3-31-201ENST00000523109 329 ntBASIC2.43□□□□□ -2.02
HMGB1P09429 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.43□□□□□ -2.02
HMGB1P09429 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.42□□□□□ -2.02
HMGB1P09429 AC092881.1-201ENST00000638218 2733 ntBASIC2.42□□□□□ -2.02
HMGB1P09429 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC2.42□□□□□ -2.02
HMGB1P09429 SNORA3.2-201ENST00000408221 125 ntBASIC2.42□□□□□ -2.02
HMGB1P09429 RNU6-1186P-201ENST00000410429 97 ntBASIC2.42□□□□□ -2.02
HMGB1P09429 RNA5SP508-201ENST00000411327 119 ntBASIC2.42□□□□□ -2.02
HMGB1P09429 DPH3P2-201ENST00000422618 250 ntBASIC2.42□□□□□ -2.02
HMGB1P09429 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
HMGB1P09429 AC107399.1-201ENST00000451226 265 ntBASIC2.42□□□□□ -2.02
HMGB1P09429 RNU1-98P-201ENST00000458992 160 ntBASIC2.42□□□□□ -2.02
HMGB1P09429 AC008549.1-201ENST00000512900 643 ntBASIC2.42□□□□□ -2.02
HMGB1P09429 AK6P2-201ENST00000549020 471 ntBASIC2.42□□□□□ -2.02
HMGB1P09429 AC060780.3-201ENST00000589464 80 ntBASIC2.42□□□□□ -2.02
HMGB1P09429 AL359075.3-201ENST00000613288 217 ntBASIC2.42□□□□□ -2.02
HMGB1P09429 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.42□□□□□ -2.02
HMGB1P09429 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
HMGB1P09429 Y_RNA.106-201ENST00000363189 100 ntBASIC2.41□□□□□ -2.02
HMGB1P09429 RNU6ATAC2P-201ENST00000387943 126 ntBASIC2.41□□□□□ -2.02
HMGB1P09429 RNA5SP109-201ENST00000391010 116 ntBASIC2.41□□□□□ -2.02
HMGB1P09429 RNU6-1050P-201ENST00000410388 107 ntBASIC2.41□□□□□ -2.02
HMGB1P09429 RN7SKP223-201ENST00000410582 62 ntBASIC2.41□□□□□ -2.02
HMGB1P09429 AC010095.1-201ENST00000443543 144 ntBASIC2.41□□□□□ -2.02
HMGB1P09429 RNU6-717P-201ENST00000459076 104 ntBASIC2.41□□□□□ -2.02
HMGB1P09429 RNU7-87P-201ENST00000459343 62 ntBASIC2.41□□□□□ -2.02
HMGB1P09429 AC026782.1-201ENST00000512952 449 ntBASIC2.41□□□□□ -2.02
HMGB1P09429 AC093303.1-201ENST00000514549 295 ntBASIC2.41□□□□□ -2.02
HMGB1P09429 RNU6-358P-201ENST00000516564 75 ntBASIC2.41□□□□□ -2.02
HMGB1P09429 AC024995.1-201ENST00000523014 93 ntBASIC2.41□□□□□ -2.02
HMGB1P09429 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.41□□□□□ -2.02
HMGB1P09429 MTND5P35-201ENST00000557537 1720 ntBASIC2.4□□□□□ -2.02
HMGB1P09429 RNA5SP160-201ENST00000364866 120 ntBASIC2.4□□□□□ -2.03
HMGB1P09429 RNU6-203P-201ENST00000384038 104 ntBASIC2.4□□□□□ -2.03
HMGB1P09429 SNORA64-201ENST00000384674 134 ntBASIC2.4□□□□□ -2.03
HMGB1P09429 RNU1-78P-201ENST00000391248 165 ntBASIC2.4□□□□□ -2.03
HMGB1P09429 MIR548K-201ENST00000408406 116 ntBASIC2.4□□□□□ -2.03
HMGB1P09429 Y_RNA.594-201ENST00000410373 140 ntBASIC2.4□□□□□ -2.03
HMGB1P09429 AL445646.1-201ENST00000431784 216 ntBASIC2.4□□□□□ -2.03
HMGB1P09429 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.4□□□□□ -2.03
HMGB1P09429 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC2.4□□□□□ -2.03
HMGB1P09429 NDUFB4P10-201ENST00000452541 359 ntBASIC2.4□□□□□ -2.03
HMGB1P09429 RNU6-1114P-201ENST00000516022 107 ntBASIC2.4□□□□□ -2.03
HMGB1P09429 AC093023.1-201ENST00000547375 507 ntBASIC2.4□□□□□ -2.03
HMGB1P09429 AC005668.1-201ENST00000571142 476 ntBASIC2.4□□□□□ -2.03
HMGB1P09429 ZNF355P-201ENST00000427301 3216 ntBASIC2.4□□□□□ -2.03
HMGB1P09429 MTND5P16-201ENST00000460269 1703 ntBASIC2.39□□□□□ -2.03
HMGB1P09429 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
HMGB1P09429 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
HMGB1P09429 Y_RNA.184-201ENST00000363884 108 ntBASIC2.39□□□□□ -2.03
HMGB1P09429 RNU6-601P-201ENST00000384540 107 ntBASIC2.39□□□□□ -2.03
HMGB1P09429 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
HMGB1P09429 RNU6-700P-201ENST00000391043 107 ntBASIC2.39□□□□□ -2.03
HMGB1P09429 AL023284.1-201ENST00000403956 276 ntBASIC2.39□□□□□ -2.03
HMGB1P09429 RN7SKP32-201ENST00000410167 303 ntBASIC2.39□□□□□ -2.03
HMGB1P09429 AL139156.1-201ENST00000412785 841 ntBASIC2.39□□□□□ -2.03
HMGB1P09429 AL353997.1-201ENST00000432936 108 ntBASIC2.39□□□□□ -2.03
HMGB1P09429 RPS26P45-201ENST00000471748 340 ntBASIC2.39□□□□□ -2.03
HMGB1P09429 AC019176.1-201ENST00000518519 225 ntBASIC2.39□□□□□ -2.03
HMGB1P09429 AC027419.1-201ENST00000522976 328 ntBASIC2.39□□□□□ -2.03
HMGB1P09429 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.39□□□□□ -2.03
HMGB1P09429 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
HMGB1P09429 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC2.38□□□□□ -2.03
HMGB1P09429 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.38□□□□□ -2.03
HMGB1P09429 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
HMGB1P09429 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
HMGB1P09429 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.38□□□□□ -2.03
HMGB1P09429 AC005002.2-201ENST00000438228 269 ntBASIC2.38□□□□□ -2.03
HMGB1P09429 RPS26P55-201ENST00000471178 356 ntBASIC2.38□□□□□ -2.03
HMGB1P09429 AC079140.2-201ENST00000506193 142 ntBASIC2.38□□□□□ -2.03
HMGB1P09429 Y_RNA.670-201ENST00000516255 105 ntBASIC2.38□□□□□ -2.03
HMGB1P09429 Y_RNA.683-201ENST00000516508 93 ntBASIC2.38□□□□□ -2.03
HMGB1P09429 AC098679.4-201ENST00000624241 654 ntBASIC2.38□□□□□ -2.03
HMGB1P09429 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
HMGB1P09429 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
HMGB1P09429 SNORD1A-201ENST00000364968 72 ntBASIC2.37□□□□□ -2.03
HMGB1P09429 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
HMGB1P09429 RPL37P10-201ENST00000412884 288 ntBASIC2.37□□□□□ -2.03
HMGB1P09429 MTND4P18-201ENST00000447010 465 ntBASIC2.37□□□□□ -2.03
HMGB1P09429 Y_RNA.708-201ENST00000516950 96 ntBASIC2.37□□□□□ -2.03
HMGB1P09429 APOOP3-201ENST00000536787 586 ntBASIC2.37□□□□□ -2.03
HMGB1P09429 AL137100.2-201ENST00000555786 315 ntBASIC2.37□□□□□ -2.03
HMGB1P09429 AC009229.3-201ENST00000608056 282 ntBASIC2.37□□□□□ -2.03
HMGB1P09429 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
HMGB1P09429 AC005858.4-201ENST00000623191 700 ntBASIC2.37□□□□□ -2.03
HMGB1P09429 Y_RNA.72-201ENST00000362894 103 ntBASIC2.36□□□□□ -2.03
HMGB1P09429 RNU6-593P-201ENST00000364716 112 ntBASIC2.36□□□□□ -2.03
HMGB1P09429 RPL21P1-201ENST00000399532 476 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms