Protein–RNA interactions for Protein: P08247

SYP, Synaptophysin, humanhuman

Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYPP08247 SRIP1-201ENST00000489235 288 ntBASIC3.29□□□□□ -1.88
SYPP08247 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.29□□□□□ -1.88
SYPP08247 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC3.29□□□□□ -1.88
SYPP08247 MIR4431-201ENST00000579990 94 ntBASIC3.29□□□□□ -1.88
SYPP08247 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.29□□□□□ -1.88
SYPP08247 AC093732.2-201ENST00000607950 274 ntBASIC3.29□□□□□ -1.88
SYPP08247 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SYPP08247 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.29□□□□□ -1.88
SYPP08247 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
SYPP08247 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
SYPP08247 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
SYPP08247 AL136164.4-201ENST00000625013 2135 ntBASIC3.28□□□□□ -1.88
SYPP08247 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
SYPP08247 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.28□□□□□ -1.88
SYPP08247 RNU6-151P-201ENST00000364158 107 ntBASIC3.28□□□□□ -1.88
SYPP08247 RNU6-1305P-201ENST00000364353 104 ntBASIC3.28□□□□□ -1.88
SYPP08247 RNU6-283P-201ENST00000364788 107 ntBASIC3.28□□□□□ -1.88
SYPP08247 Y_RNA.293-201ENST00000364908 93 ntBASIC3.28□□□□□ -1.88
SYPP08247 RNU6-22P-201ENST00000384355 107 ntBASIC3.28□□□□□ -1.88
SYPP08247 AL139281.1-201ENST00000422120 335 ntBASIC3.28□□□□□ -1.88
SYPP08247 ARF4P2-201ENST00000430209 526 ntBASIC3.28□□□□□ -1.88
SYPP08247 Z98742.2-201ENST00000431564 187 ntBASIC3.28□□□□□ -1.88
SYPP08247 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC3.28□□□□□ -1.88
SYPP08247 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.28□□□□□ -1.88
SYPP08247 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.28□□□□□ -1.88
SYPP08247 RNU6-426P-201ENST00000516464 97 ntBASIC3.28□□□□□ -1.88
SYPP08247 MIR3186-201ENST00000577404 85 ntBASIC3.28□□□□□ -1.88
SYPP08247 AC090616.3-201ENST00000582184 217 ntBASIC3.28□□□□□ -1.88
SYPP08247 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.28□□□□□ -1.88
SYPP08247 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.28□□□□□ -1.88
SYPP08247 AC091895.1-201ENST00000624494 256 ntBASIC3.28□□□□□ -1.88
SYPP08247 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SYPP08247 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.28□□□□□ -1.88
SYPP08247 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.28□□□□□ -1.88
SYPP08247 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
SYPP08247 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
SYPP08247 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
SYPP08247 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
SYPP08247 RNA5SP42-201ENST00000364278 115 ntBASIC3.27□□□□□ -1.89
SYPP08247 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SYPP08247 Y_RNA.572-201ENST00000384757 98 ntBASIC3.27□□□□□ -1.89
SYPP08247 MIR569-201ENST00000385228 96 ntBASIC3.27□□□□□ -1.89
SYPP08247 MIR767-201ENST00000390228 109 ntBASIC3.27□□□□□ -1.89
SYPP08247 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
SYPP08247 Y_RNA.586-201ENST00000391146 98 ntBASIC3.27□□□□□ -1.89
SYPP08247 RNU2-51P-201ENST00000410708 197 ntBASIC3.27□□□□□ -1.89
SYPP08247 RNU7-141P-201ENST00000459304 62 ntBASIC3.27□□□□□ -1.89
SYPP08247 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.27□□□□□ -1.89
SYPP08247 RNU6-1098P-201ENST00000516772 96 ntBASIC3.27□□□□□ -1.89
SYPP08247 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.27□□□□□ -1.89
SYPP08247 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.27□□□□□ -1.89
SYPP08247 MIR3684-201ENST00000579779 74 ntBASIC3.27□□□□□ -1.89
SYPP08247 MIR4425-201ENST00000580572 84 ntBASIC3.27□□□□□ -1.89
SYPP08247 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.27□□□□□ -1.89
SYPP08247 AC025754.2-201ENST00000606491 432 ntBASIC3.27□□□□□ -1.89
SYPP08247 Y_RNA.802-201ENST00000614892 130 ntBASIC3.27□□□□□ -1.89
SYPP08247 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SYPP08247 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.27□□□□□ -1.89
SYPP08247 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SYPP08247 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.26□□□□□ -1.89
SYPP08247 RNU1-105P-201ENST00000363470 161 ntBASIC3.26□□□□□ -1.89
SYPP08247 SNORA5B-201ENST00000363786 132 ntBASIC3.26□□□□□ -1.89
SYPP08247 SNORA51.4-201ENST00000364993 124 ntBASIC3.26□□□□□ -1.89
SYPP08247 AP002088.1-201ENST00000382740 395 ntBASIC3.26□□□□□ -1.89
SYPP08247 MIR526A2-201ENST00000390198 65 ntBASIC3.26□□□□□ -1.89
SYPP08247 MIR1185-2-201ENST00000408687 86 ntBASIC3.26□□□□□ -1.89
SYPP08247 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.26□□□□□ -1.89
SYPP08247 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.26□□□□□ -1.89
SYPP08247 RPL23AP67-201ENST00000465341 474 ntBASIC3.26□□□□□ -1.89
SYPP08247 HMGN2P9-201ENST00000476875 229 ntBASIC3.26□□□□□ -1.89
SYPP08247 SCARNA8-201ENST00000515924 131 ntBASIC3.26□□□□□ -1.89
SYPP08247 SNORA70.12-201ENST00000516084 153 ntBASIC3.26□□□□□ -1.89
SYPP08247 RNU6-479P-201ENST00000516348 105 ntBASIC3.26□□□□□ -1.89
SYPP08247 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.26□□□□□ -1.89
SYPP08247 AC026333.2-201ENST00000542164 106 ntBASIC3.26□□□□□ -1.89
SYPP08247 MIR5047-201ENST00000579212 100 ntBASIC3.26□□□□□ -1.89
SYPP08247 RPL30P11-203ENST00000598995 310 ntBASIC3.26□□□□□ -1.89
SYPP08247 AL670379.2-201ENST00000604983 252 ntBASIC3.26□□□□□ -1.89
SYPP08247 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.26□□□□□ -1.89
SYPP08247 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
SYPP08247 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SYPP08247 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC3.25□□□□□ -1.89
SYPP08247 Y_RNA.24-201ENST00000362508 103 ntBASIC3.25□□□□□ -1.89
SYPP08247 MIR29B2-201ENST00000385055 81 ntBASIC3.25□□□□□ -1.89
SYPP08247 MIR591-201ENST00000385290 95 ntBASIC3.25□□□□□ -1.89
SYPP08247 RN7SL863P-201ENST00000462370 296 ntBASIC3.25□□□□□ -1.89
SYPP08247 RN7SL330P-201ENST00000469709 307 ntBASIC3.25□□□□□ -1.89
SYPP08247 AC109810.1-201ENST00000534066 224 ntBASIC3.25□□□□□ -1.89
SYPP08247 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.25□□□□□ -1.89
SYPP08247 AC008739.2-201ENST00000597006 317 ntBASIC3.25□□□□□ -1.89
SYPP08247 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.25□□□□□ -1.89
SYPP08247 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
SYPP08247 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.25□□□□□ -1.89
SYPP08247 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.24□□□□□ -1.89
SYPP08247 SNORD114-7-201ENST00000362520 77 ntBASIC3.24□□□□□ -1.89
SYPP08247 RNU6-969P-201ENST00000383900 105 ntBASIC3.24□□□□□ -1.89
SYPP08247 RNU6-1027P-201ENST00000383998 107 ntBASIC3.24□□□□□ -1.89
SYPP08247 MIR616-201ENST00000385293 97 ntBASIC3.24□□□□□ -1.89
SYPP08247 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.24□□□□□ -1.89
SYPP08247 AL357552.1-201ENST00000445254 415 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms