Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.24□□□□□ -2.21
CAPN1P07384 AC004492.1-201ENST00000607036 742 ntBASIC1.24□□□□□ -2.21
CAPN1P07384 MIR8065-201ENST00000620577 100 ntBASIC1.24□□□□□ -2.21
CAPN1P07384 MIR338-201ENST00000636369 67 ntBASIC1.24□□□□□ -2.21
CAPN1P07384 MIR302D-201ENST00000362275 68 ntBASIC1.23□□□□□ -2.21
CAPN1P07384 snoU2-30.2-201ENST00000362805 70 ntBASIC1.23□□□□□ -2.21
CAPN1P07384 SNORA33-201ENST00000363664 130 ntBASIC1.23□□□□□ -2.21
CAPN1P07384 SNORA25.9-201ENST00000365087 128 ntBASIC1.23□□□□□ -2.21
CAPN1P07384 RNU6-483P-201ENST00000384088 108 ntBASIC1.23□□□□□ -2.21
CAPN1P07384 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
CAPN1P07384 SNORA40.6-201ENST00000391153 128 ntBASIC1.23□□□□□ -2.21
CAPN1P07384 RNU2-16P-201ENST00000410712 136 ntBASIC1.23□□□□□ -2.21
CAPN1P07384 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.23□□□□□ -2.21
CAPN1P07384 EIF1P1-201ENST00000421436 341 ntBASIC1.23□□□□□ -2.21
CAPN1P07384 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1.23□□□□□ -2.21
CAPN1P07384 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC1.23□□□□□ -2.21
CAPN1P07384 OR2AQ1P-201ENST00000451972 200 ntBASIC1.23□□□□□ -2.21
CAPN1P07384 RNU7-187P-201ENST00000458985 68 ntBASIC1.23□□□□□ -2.21
CAPN1P07384 RPL30P7-201ENST00000479312 323 ntBASIC1.23□□□□□ -2.21
CAPN1P07384 RN7SKP179-201ENST00000516126 217 ntBASIC1.23□□□□□ -2.21
CAPN1P07384 Y_RNA.665-201ENST00000516177 98 ntBASIC1.23□□□□□ -2.21
CAPN1P07384 RAB11AP2-201ENST00000545905 639 ntBASIC1.23□□□□□ -2.21
CAPN1P07384 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.23□□□□□ -2.21
CAPN1P07384 AC019288.1-201ENST00000557918 224 ntBASIC1.23□□□□□ -2.21
CAPN1P07384 NBR2-204ENST00000587322 63 ntBASIC1.23□□□□□ -2.21
CAPN1P07384 AC006001.4-201ENST00000622243 395 ntBASIC1.23□□□□□ -2.21
CAPN1P07384 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.22□□□□□ -2.21
CAPN1P07384 RNU6-254P-201ENST00000363377 107 ntBASIC1.22□□□□□ -2.21
CAPN1P07384 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
CAPN1P07384 RNU6-908P-201ENST00000410160 94 ntBASIC1.22□□□□□ -2.21
CAPN1P07384 Y_RNA.615-201ENST00000410769 117 ntBASIC1.22□□□□□ -2.21
CAPN1P07384 RPS27P16-201ENST00000425758 201 ntBASIC1.22□□□□□ -2.21
CAPN1P07384 AC015922.2-201ENST00000435593 184 ntBASIC1.22□□□□□ -2.21
CAPN1P07384 SEPT14P3-201ENST00000439401 183 ntBASIC1.22□□□□□ -2.21
CAPN1P07384 AL732372.2-207ENST00000445840 183 ntBASIC1.22□□□□□ -2.21
CAPN1P07384 SEPT14P2-201ENST00000453405 183 ntBASIC1.22□□□□□ -2.21
CAPN1P07384 AC007215.1-201ENST00000464893 276 ntBASIC1.22□□□□□ -2.21
CAPN1P07384 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.22□□□□□ -2.21
CAPN1P07384 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.22□□□□□ -2.21
CAPN1P07384 HMGN1P12-201ENST00000499125 195 ntBASIC1.22□□□□□ -2.21
CAPN1P07384 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.22□□□□□ -2.21
CAPN1P07384 SEPT14P4-201ENST00000513445 186 ntBASIC1.22□□□□□ -2.21
CAPN1P07384 RNU6-1281P-201ENST00000516223 105 ntBASIC1.22□□□□□ -2.21
CAPN1P07384 AC090821.2-201ENST00000523552 176 ntBASIC1.22□□□□□ -2.21
CAPN1P07384 FO082796.1-201ENST00000523795 183 ntBASIC1.22□□□□□ -2.21
CAPN1P07384 MTND1P35-201ENST00000526739 508 ntBASIC1.22□□□□□ -2.21
CAPN1P07384 AC026371.1-201ENST00000551867 419 ntBASIC1.22□□□□□ -2.21
CAPN1P07384 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC1.22□□□□□ -2.21
CAPN1P07384 AL133215.3-201ENST00000609801 448 ntBASIC1.22□□□□□ -2.21
CAPN1P07384 AC040896.1-201ENST00000613819 479 ntBASIC1.22□□□□□ -2.21
CAPN1P07384 AL078596.1-201ENST00000624856 447 ntBASIC1.22□□□□□ -2.21
CAPN1P07384 SCARNA4-201ENST00000629045 128 ntBASIC1.22□□□□□ -2.21
CAPN1P07384 SNORD50.1-201ENST00000362987 71 ntBASIC1.21□□□□□ -2.22
CAPN1P07384 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.21□□□□□ -2.22
CAPN1P07384 TOMM22P2-201ENST00000430735 237 ntBASIC1.21□□□□□ -2.22
CAPN1P07384 RNU7-57P-201ENST00000459540 60 ntBASIC1.21□□□□□ -2.22
CAPN1P07384 RPL23AP75-201ENST00000491601 451 ntBASIC1.21□□□□□ -2.22
CAPN1P07384 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.21□□□□□ -2.22
CAPN1P07384 AC024995.1-201ENST00000523014 93 ntBASIC1.21□□□□□ -2.22
CAPN1P07384 AC016957.1-201ENST00000534895 309 ntBASIC1.21□□□□□ -2.22
CAPN1P07384 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.21□□□□□ -2.22
CAPN1P07384 AC015688.6-201ENST00000577737 104 ntBASIC1.21□□□□□ -2.22
CAPN1P07384 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.21□□□□□ -2.22
CAPN1P07384 RNU6-1252P-201ENST00000363054 104 ntBASIC1.2□□□□□ -2.22
CAPN1P07384 RNA5SP259-201ENST00000365541 109 ntBASIC1.2□□□□□ -2.22
CAPN1P07384 Y_RNA.373-201ENST00000365600 103 ntBASIC1.2□□□□□ -2.22
CAPN1P07384 SNORA67.2-201ENST00000384300 149 ntBASIC1.2□□□□□ -2.22
CAPN1P07384 Y_RNA.559-201ENST00000384686 107 ntBASIC1.2□□□□□ -2.22
CAPN1P07384 RNU6-417P-201ENST00000384712 107 ntBASIC1.2□□□□□ -2.22
CAPN1P07384 MIR586-201ENST00000385035 97 ntBASIC1.2□□□□□ -2.22
CAPN1P07384 MIR513A1-201ENST00000385138 129 ntBASIC1.2□□□□□ -2.22
CAPN1P07384 RNU6-57P-201ENST00000411348 103 ntBASIC1.2□□□□□ -2.22
CAPN1P07384 AC008134.1-201ENST00000420943 193 ntBASIC1.2□□□□□ -2.22
CAPN1P07384 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.2□□□□□ -2.22
CAPN1P07384 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.2□□□□□ -2.22
CAPN1P07384 AC079354.2-201ENST00000453523 154 ntBASIC1.2□□□□□ -2.22
CAPN1P07384 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.2□□□□□ -2.22
CAPN1P07384 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.2□□□□□ -2.22
CAPN1P07384 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.2□□□□□ -2.22
CAPN1P07384 AL162413.1-201ENST00000603198 110 ntBASIC1.2□□□□□ -2.22
CAPN1P07384 AC103591.3-201ENST00000608684 209 ntBASIC1.2□□□□□ -2.22
CAPN1P07384 AC099654.5-201ENST00000636479 350 ntBASIC1.2□□□□□ -2.22
CAPN1P07384 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.2□□□□□ -2.22
CAPN1P07384 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
CAPN1P07384 ZNF204P-201ENST00000416749 2397 ntBASIC1.19□□□□□ -2.22
CAPN1P07384 Y_RNA.151-201ENST00000363566 112 ntBASIC1.19□□□□□ -2.22
CAPN1P07384 SNORA4.2-201ENST00000365313 147 ntBASIC1.19□□□□□ -2.22
CAPN1P07384 RPL37P10-201ENST00000412884 288 ntBASIC1.19□□□□□ -2.22
CAPN1P07384 AL590632.1-201ENST00000424289 371 ntBASIC1.19□□□□□ -2.22
CAPN1P07384 NDUFA5P4-201ENST00000436704 385 ntBASIC1.19□□□□□ -2.22
CAPN1P07384 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.19□□□□□ -2.22
CAPN1P07384 RNU7-66P-201ENST00000459469 62 ntBASIC1.19□□□□□ -2.22
CAPN1P07384 HMGN2P26-201ENST00000463169 339 ntBASIC1.19□□□□□ -2.22
CAPN1P07384 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.19□□□□□ -2.22
CAPN1P07384 RNU7-40P-201ENST00000516397 64 ntBASIC1.19□□□□□ -2.22
CAPN1P07384 RNU1-142P-201ENST00000516682 145 ntBASIC1.19□□□□□ -2.22
CAPN1P07384 RNA5SP102-201ENST00000516865 106 ntBASIC1.19□□□□□ -2.22
CAPN1P07384 RNU6-1198P-201ENST00000516904 67 ntBASIC1.19□□□□□ -2.22
CAPN1P07384 ZNF519P2-201ENST00000557032 169 ntBASIC1.19□□□□□ -2.22
CAPN1P07384 AP003465.2-201ENST00000602571 373 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 163.9 ms