Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 RNA5SP276-201ENST00000362580 94 ntBASIC2.07□□□□□ -2.08
RB1P06400 SNORA17.3-201ENST00000391159 129 ntBASIC2.07□□□□□ -2.08
RB1P06400 MIR1287-201ENST00000408492 90 ntBASIC2.07□□□□□ -2.08
RB1P06400 MTND3P23-201ENST00000431980 347 ntBASIC2.07□□□□□ -2.08
RB1P06400 AL445305.1-201ENST00000432577 575 ntBASIC2.07□□□□□ -2.08
RB1P06400 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.07□□□□□ -2.08
RB1P06400 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.07□□□□□ -2.08
RB1P06400 AC114982.1-201ENST00000469402 321 ntBASIC2.07□□□□□ -2.08
RB1P06400 AP000870.1-201ENST00000472927 406 ntBASIC2.07□□□□□ -2.08
RB1P06400 AC091951.2-201ENST00000500762 203 ntBASIC2.07□□□□□ -2.08
RB1P06400 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.07□□□□□ -2.08
RB1P06400 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.07□□□□□ -2.08
RB1P06400 SNORA25.14-201ENST00000516481 132 ntBASIC2.07□□□□□ -2.08
RB1P06400 MIR5089-201ENST00000580047 84 ntBASIC2.07□□□□□ -2.08
RB1P06400 MIR5002-201ENST00000584713 97 ntBASIC2.07□□□□□ -2.08
RB1P06400 AC008749.1-201ENST00000597650 306 ntBASIC2.07□□□□□ -2.08
RB1P06400 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.07□□□□□ -2.08
RB1P06400 AC092794.2-201ENST00000620933 563 ntBASIC2.07□□□□□ -2.08
RB1P06400 AC008873.1-201ENST00000625051 138 ntBASIC2.07□□□□□ -2.08
RB1P06400 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.07□□□□□ -2.08
RB1P06400 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
RB1P06400 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
RB1P06400 RNU6-1188P-201ENST00000363795 107 ntBASIC2.06□□□□□ -2.08
RB1P06400 RNU6-280P-201ENST00000364145 104 ntBASIC2.06□□□□□ -2.08
RB1P06400 RNA5SP190-201ENST00000365222 118 ntBASIC2.06□□□□□ -2.08
RB1P06400 MIR586-201ENST00000385035 97 ntBASIC2.06□□□□□ -2.08
RB1P06400 MIR676-201ENST00000390702 67 ntBASIC2.06□□□□□ -2.08
RB1P06400 RNU6-700P-201ENST00000391043 107 ntBASIC2.06□□□□□ -2.08
RB1P06400 RNU2-40P-201ENST00000410833 196 ntBASIC2.06□□□□□ -2.08
RB1P06400 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.06□□□□□ -2.08
RB1P06400 AL357134.1-201ENST00000445848 426 ntBASIC2.06□□□□□ -2.08
RB1P06400 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.06□□□□□ -2.08
RB1P06400 HMGN2P9-201ENST00000476875 229 ntBASIC2.06□□□□□ -2.08
RB1P06400 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.06□□□□□ -2.08
RB1P06400 MRPS17P9-201ENST00000511924 393 ntBASIC2.06□□□□□ -2.08
RB1P06400 AC107393.1-201ENST00000512403 346 ntBASIC2.06□□□□□ -2.08
RB1P06400 RNU6-559P-201ENST00000516151 98 ntBASIC2.06□□□□□ -2.08
RB1P06400 SNORA25.15-201ENST00000516487 89 ntBASIC2.06□□□□□ -2.08
RB1P06400 RNU2-34P-201ENST00000516534 121 ntBASIC2.06□□□□□ -2.08
RB1P06400 APOOP3-201ENST00000536787 586 ntBASIC2.06□□□□□ -2.08
RB1P06400 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.06□□□□□ -2.08
RB1P06400 UBL5P4-201ENST00000562584 236 ntBASIC2.06□□□□□ -2.08
RB1P06400 AC002984.1-201ENST00000591692 448 ntBASIC2.06□□□□□ -2.08
RB1P06400 SNORD11B-201ENST00000607707 90 ntBASIC2.06□□□□□ -2.08
RB1P06400 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.06□□□□□ -2.08
RB1P06400 AC005296.1-201ENST00000616145 209 ntBASIC2.06□□□□□ -2.08
RB1P06400 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.06□□□□□ -2.08
RB1P06400 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
RB1P06400 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.05□□□□□ -2.08
RB1P06400 MIR337-201ENST00000362281 93 ntBASIC2.05□□□□□ -2.08
RB1P06400 RNU1-62P-201ENST00000362599 164 ntBASIC2.05□□□□□ -2.08
RB1P06400 RNU5F-3P-201ENST00000363767 117 ntBASIC2.05□□□□□ -2.08
RB1P06400 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.05□□□□□ -2.08
RB1P06400 SNORA67.2-201ENST00000384300 149 ntBASIC2.05□□□□□ -2.08
RB1P06400 RNY3P14-201ENST00000384309 102 ntBASIC2.05□□□□□ -2.08
RB1P06400 MIR10B-201ENST00000385011 110 ntBASIC2.05□□□□□ -2.08
RB1P06400 MTCYBP10-201ENST00000424905 650 ntBASIC2.05□□□□□ -2.08
RB1P06400 USP9YP16-201ENST00000430287 407 ntBASIC2.05□□□□□ -2.08
RB1P06400 RPL23AP50-201ENST00000434149 455 ntBASIC2.05□□□□□ -2.08
RB1P06400 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.05□□□□□ -2.08
RB1P06400 MTND5P20-201ENST00000448677 143 ntBASIC2.05□□□□□ -2.08
RB1P06400 USP9YP23-201ENST00000455085 407 ntBASIC2.05□□□□□ -2.08
RB1P06400 RNU6-1114P-201ENST00000516022 107 ntBASIC2.05□□□□□ -2.08
RB1P06400 RNU6-277P-201ENST00000516272 106 ntBASIC2.05□□□□□ -2.08
RB1P06400 RNU6-875P-201ENST00000516488 106 ntBASIC2.05□□□□□ -2.08
RB1P06400 MIR4448-201ENST00000584360 86 ntBASIC2.05□□□□□ -2.08
RB1P06400 AL096840.1-201ENST00000603287 93 ntBASIC2.05□□□□□ -2.08
RB1P06400 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.05□□□□□ -2.08
RB1P06400 MTND4P1-201ENST00000457501 1466 ntBASIC2.05□□□□□ -2.08
RB1P06400 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
RB1P06400 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
RB1P06400 RNU6-222P-201ENST00000362438 107 ntBASIC2.04□□□□□ -2.08
RB1P06400 Y_RNA.106-201ENST00000363189 100 ntBASIC2.04□□□□□ -2.08
RB1P06400 RNU6-457P-201ENST00000363999 107 ntBASIC2.04□□□□□ -2.08
RB1P06400 RNU6-1305P-201ENST00000364353 104 ntBASIC2.04□□□□□ -2.08
RB1P06400 RNU6-975P-201ENST00000384296 105 ntBASIC2.04□□□□□ -2.08
RB1P06400 RNU1-139P-201ENST00000391307 165 ntBASIC2.04□□□□□ -2.08
RB1P06400 MIR190B-201ENST00000401119 79 ntBASIC2.04□□□□□ -2.08
RB1P06400 RNA5SP504-201ENST00000410676 117 ntBASIC2.04□□□□□ -2.08
RB1P06400 Y_RNA.646-201ENST00000410980 101 ntBASIC2.04□□□□□ -2.08
RB1P06400 RNA5SP501-201ENST00000410990 112 ntBASIC2.04□□□□□ -2.08
RB1P06400 AL158823.1-201ENST00000418441 478 ntBASIC2.04□□□□□ -2.08
RB1P06400 HMGN2P19-201ENST00000425149 265 ntBASIC2.04□□□□□ -2.08
RB1P06400 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
RB1P06400 AL353689.1-201ENST00000438895 199 ntBASIC2.04□□□□□ -2.08
RB1P06400 AC074290.1-201ENST00000448883 135 ntBASIC2.04□□□□□ -2.08
RB1P06400 RPL23AP3-201ENST00000453844 468 ntBASIC2.04□□□□□ -2.08
RB1P06400 AC025033.1-201ENST00000463883 194 ntBASIC2.04□□□□□ -2.08
RB1P06400 AC067942.3-201ENST00000512025 362 ntBASIC2.04□□□□□ -2.08
RB1P06400 Y_RNA.702-201ENST00000516843 96 ntBASIC2.04□□□□□ -2.08
RB1P06400 RNU6-856P-201ENST00000516959 98 ntBASIC2.04□□□□□ -2.08
RB1P06400 RNU1-117P-201ENST00000517041 158 ntBASIC2.04□□□□□ -2.08
RB1P06400 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.04□□□□□ -2.08
RB1P06400 MIR5690-201ENST00000583739 73 ntBASIC2.04□□□□□ -2.08
RB1P06400 AC005786.1-201ENST00000588553 154 ntBASIC2.04□□□□□ -2.08
RB1P06400 AL132765.2-201ENST00000610812 351 ntBASIC2.04□□□□□ -2.08
RB1P06400 AC025253.1-201ENST00000613623 543 ntBASIC2.04□□□□□ -2.08
RB1P06400 AL078596.1-201ENST00000624856 447 ntBASIC2.04□□□□□ -2.08
RB1P06400 MIR1302-1-201ENST00000637932 143 ntBASIC2.04□□□□□ -2.08
RB1P06400 RNU6-418P-201ENST00000384035 107 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms