Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 MIR6734-201ENST00000621166 68 ntBASIC0.42□□□□□ -2.34
HLA-DQB2P05538 AP000568.1-201ENST00000282964 442 ntBASIC0.41□□□□□ -2.34
HLA-DQB2P05538 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
HLA-DQB2P05538 RNU6-606P-201ENST00000384721 111 ntBASIC0.41□□□□□ -2.34
HLA-DQB2P05538 MIR10B-201ENST00000385011 110 ntBASIC0.41□□□□□ -2.34
HLA-DQB2P05538 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
HLA-DQB2P05538 AL451046.2-201ENST00000403074 277 ntBASIC0.41□□□□□ -2.34
HLA-DQB2P05538 RNA5SP504-201ENST00000410676 117 ntBASIC0.41□□□□□ -2.34
HLA-DQB2P05538 Z99497.1-201ENST00000421282 135 ntBASIC0.41□□□□□ -2.34
HLA-DQB2P05538 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC0.41□□□□□ -2.34
HLA-DQB2P05538 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC0.41□□□□□ -2.34
HLA-DQB2P05538 RPL39P39-201ENST00000455840 151 ntBASIC0.41□□□□□ -2.34
HLA-DQB2P05538 RNU7-90P-201ENST00000459216 62 ntBASIC0.41□□□□□ -2.34
HLA-DQB2P05538 AL049830.1-201ENST00000468034 425 ntBASIC0.41□□□□□ -2.34
HLA-DQB2P05538 MTATP6P9-201ENST00000515039 680 ntBASIC0.41□□□□□ -2.34
HLA-DQB2P05538 RNU4-54P-201ENST00000516428 129 ntBASIC0.41□□□□□ -2.34
HLA-DQB2P05538 RNA5SP121-201ENST00000516537 101 ntBASIC0.41□□□□□ -2.34
HLA-DQB2P05538 AC007834.2-201ENST00000536310 343 ntBASIC0.41□□□□□ -2.34
HLA-DQB2P05538 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.41□□□□□ -2.34
HLA-DQB2P05538 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC0.41□□□□□ -2.34
HLA-DQB2P05538 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.41□□□□□ -2.34
HLA-DQB2P05538 AL357312.1-201ENST00000603879 298 ntBASIC0.41□□□□□ -2.34
HLA-DQB2P05538 AC025449.1-201ENST00000603896 529 ntBASIC0.41□□□□□ -2.34
HLA-DQB2P05538 AC009229.3-201ENST00000608056 282 ntBASIC0.41□□□□□ -2.34
HLA-DQB2P05538 AC243829.3-201ENST00000622177 108 ntBASIC0.41□□□□□ -2.34
HLA-DQB2P05538 AL078596.1-201ENST00000624856 447 ntBASIC0.41□□□□□ -2.34
HLA-DQB2P05538 CASC19-280ENST00000642102 1351 ntBASIC0.41□□□□□ -2.34
HLA-DQB2P05538 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.4□□□□□ -2.35
HLA-DQB2P05538 RNU6-1214P-201ENST00000363650 109 ntBASIC0.4□□□□□ -2.35
HLA-DQB2P05538 RNU6-1335P-201ENST00000365426 107 ntBASIC0.4□□□□□ -2.35
HLA-DQB2P05538 RNU1-139P-201ENST00000391307 165 ntBASIC0.4□□□□□ -2.35
HLA-DQB2P05538 RNU2-29P-201ENST00000410423 189 ntBASIC0.4□□□□□ -2.35
HLA-DQB2P05538 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.4□□□□□ -2.35
HLA-DQB2P05538 MTND3P9-201ENST00000429526 346 ntBASIC0.4□□□□□ -2.35
HLA-DQB2P05538 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.4□□□□□ -2.35
HLA-DQB2P05538 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC0.4□□□□□ -2.35
HLA-DQB2P05538 AC005178.1-201ENST00000508392 440 ntBASIC0.4□□□□□ -2.35
HLA-DQB2P05538 RNU4-57P-201ENST00000515980 135 ntBASIC0.4□□□□□ -2.35
HLA-DQB2P05538 SNORA70.12-201ENST00000516084 153 ntBASIC0.4□□□□□ -2.35
HLA-DQB2P05538 RNU6-344P-201ENST00000516635 111 ntBASIC0.4□□□□□ -2.35
HLA-DQB2P05538 RNU1-117P-201ENST00000517041 158 ntBASIC0.4□□□□□ -2.35
HLA-DQB2P05538 AL137161.1-201ENST00000532231 390 ntBASIC0.4□□□□□ -2.35
HLA-DQB2P05538 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC0.4□□□□□ -2.35
HLA-DQB2P05538 SNRPGP20-201ENST00000604477 205 ntBASIC0.4□□□□□ -2.35
HLA-DQB2P05538 U6.73-201ENST00000619194 103 ntBASIC0.4□□□□□ -2.35
HLA-DQB2P05538 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.4□□□□□ -2.35
HLA-DQB2P05538 SCARNA4-201ENST00000629045 128 ntBASIC0.4□□□□□ -2.35
HLA-DQB2P05538 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.4□□□□□ -2.35
HLA-DQB2P05538 ANKRD20A17P-201ENST00000511745 1330 ntBASIC0.39□□□□□ -2.35
HLA-DQB2P05538 RNU4-28P-201ENST00000364739 141 ntBASIC0.39□□□□□ -2.35
HLA-DQB2P05538 SNORA2.2-201ENST00000365473 135 ntBASIC0.39□□□□□ -2.35
HLA-DQB2P05538 SNORD116-13-201ENST00000384408 92 ntBASIC0.39□□□□□ -2.35
HLA-DQB2P05538 RNU6-1106P-201ENST00000390845 107 ntBASIC0.39□□□□□ -2.35
HLA-DQB2P05538 AL354692.1-201ENST00000423044 315 ntBASIC0.39□□□□□ -2.35
HLA-DQB2P05538 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.39□□□□□ -2.35
HLA-DQB2P05538 STAG3L5P-204ENST00000443759 179 ntBASIC0.39□□□□□ -2.35
HLA-DQB2P05538 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC0.39□□□□□ -2.35
HLA-DQB2P05538 AC022364.2-201ENST00000457963 554 ntBASIC0.39□□□□□ -2.35
HLA-DQB2P05538 RNU7-138P-201ENST00000459479 64 ntBASIC0.39□□□□□ -2.35
HLA-DQB2P05538 AF186996.7-201ENST00000492781 209 ntBASIC0.39□□□□□ -2.35
HLA-DQB2P05538 AC113410.1-201ENST00000505029 247 ntBASIC0.39□□□□□ -2.35
HLA-DQB2P05538 RNU7-99P-201ENST00000516271 62 ntBASIC0.39□□□□□ -2.35
HLA-DQB2P05538 AP002001.1-203ENST00000534002 267 ntBASIC0.39□□□□□ -2.35
HLA-DQB2P05538 MIR4711-201ENST00000578274 70 ntBASIC0.39□□□□□ -2.35
HLA-DQB2P05538 MIR5583-1-201ENST00000580941 59 ntBASIC0.39□□□□□ -2.35
HLA-DQB2P05538 CLPTM1LP1-201ENST00000604519 484 ntBASIC0.39□□□□□ -2.35
HLA-DQB2P05538 AC092354.1-201ENST00000606057 376 ntBASIC0.39□□□□□ -2.35
HLA-DQB2P05538 U2.17-201ENST00000611454 95 ntBASIC0.39□□□□□ -2.35
HLA-DQB2P05538 RMST_3.1-201ENST00000611651 109 ntBASIC0.39□□□□□ -2.35
HLA-DQB2P05538 U3.8-201ENST00000363675 217 ntBASIC0.38□□□□□ -2.35
HLA-DQB2P05538 RNU6-282P-201ENST00000365357 103 ntBASIC0.38□□□□□ -2.35
HLA-DQB2P05538 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.38□□□□□ -2.35
HLA-DQB2P05538 MIR936-201ENST00000401264 98 ntBASIC0.38□□□□□ -2.35
HLA-DQB2P05538 RNA5SP193-201ENST00000410353 107 ntBASIC0.38□□□□□ -2.35
HLA-DQB2P05538 AL445305.1-201ENST00000432577 575 ntBASIC0.38□□□□□ -2.35
HLA-DQB2P05538 FABP5P4-201ENST00000437203 171 ntBASIC0.38□□□□□ -2.35
HLA-DQB2P05538 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.38□□□□□ -2.35
HLA-DQB2P05538 ZNF736P12Y-201ENST00000443152 1243 ntBASIC0.38□□□□□ -2.35
HLA-DQB2P05538 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
HLA-DQB2P05538 AC245047.8-201ENST00000456455 284 ntBASIC0.38□□□□□ -2.35
HLA-DQB2P05538 RNU6-1037P-201ENST00000459571 107 ntBASIC0.38□□□□□ -2.35
HLA-DQB2P05538 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC0.38□□□□□ -2.35
HLA-DQB2P05538 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC0.38□□□□□ -2.35
HLA-DQB2P05538 RNU6-496P-201ENST00000516145 99 ntBASIC0.38□□□□□ -2.35
HLA-DQB2P05538 RNA5SP454-201ENST00000517231 127 ntBASIC0.38□□□□□ -2.35
HLA-DQB2P05538 MRPS36P4-201ENST00000534436 298 ntBASIC0.38□□□□□ -2.35
HLA-DQB2P05538 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.38□□□□□ -2.35
HLA-DQB2P05538 AP001506.1-201ENST00000615444 211 ntBASIC0.38□□□□□ -2.35
HLA-DQB2P05538 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.38□□□□□ -2.35
HLA-DQB2P05538 RNU6-42P-201ENST00000384165 107 ntBASIC0.37□□□□□ -2.35
HLA-DQB2P05538 RNU6-424P-201ENST00000384367 105 ntBASIC0.37□□□□□ -2.35
HLA-DQB2P05538 RNU6-456P-201ENST00000384493 107 ntBASIC0.37□□□□□ -2.35
HLA-DQB2P05538 MIR518E-201ENST00000385252 88 ntBASIC0.37□□□□□ -2.35
HLA-DQB2P05538 RNU6-903P-201ENST00000391270 109 ntBASIC0.37□□□□□ -2.35
HLA-DQB2P05538 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.37□□□□□ -2.35
HLA-DQB2P05538 AC093850.1-201ENST00000454121 251 ntBASIC0.37□□□□□ -2.35
HLA-DQB2P05538 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.37□□□□□ -2.35
HLA-DQB2P05538 snoU13.25-201ENST00000458945 104 ntBASIC0.37□□□□□ -2.35
HLA-DQB2P05538 AC022493.2-201ENST00000506122 481 ntBASIC0.37□□□□□ -2.35
HLA-DQB2P05538 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.37□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 127.5 ms