Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC-0.24□□□□□ -2.45
TCRAP04437 MIR1-1-201ENST00000362147 71 ntBASIC-0.25□□□□□ -2.45
TCRAP04437 RNU6V-201ENST00000384105 107 ntBASIC-0.25□□□□□ -2.45
TCRAP04437 RNU6-1186P-201ENST00000410429 97 ntBASIC-0.25□□□□□ -2.45
TCRAP04437 RNU2-39P-201ENST00000410604 198 ntBASIC-0.25□□□□□ -2.45
TCRAP04437 RNU7-12P-201ENST00000516030 62 ntBASIC-0.25□□□□□ -2.45
TCRAP04437 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC-0.25□□□□□ -2.45
TCRAP04437 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC-0.25□□□□□ -2.45
TCRAP04437 MIR4305-201ENST00000583252 102 ntBASIC-0.25□□□□□ -2.45
TCRAP04437 AC104695.3-201ENST00000604052 296 ntBASIC-0.25□□□□□ -2.45
TCRAP04437 U6.73-201ENST00000619194 103 ntBASIC-0.25□□□□□ -2.45
TCRAP04437 AL589826.1-201ENST00000340697 249 ntBASIC-0.26□□□□□ -2.45
TCRAP04437 RNU6-1305P-201ENST00000364353 104 ntBASIC-0.26□□□□□ -2.45
TCRAP04437 SNORD113.3-201ENST00000364630 78 ntBASIC-0.26□□□□□ -2.45
TCRAP04437 MED13P1-201ENST00000428342 171 ntBASIC-0.26□□□□□ -2.45
TCRAP04437 Y_RNA.670-201ENST00000516255 105 ntBASIC-0.26□□□□□ -2.45
TCRAP04437 AC141557.1-201ENST00000540982 400 ntBASIC-0.26□□□□□ -2.45
TCRAP04437 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC-0.26□□□□□ -2.45
TCRAP04437 AP001542.1-201ENST00000591314 200 ntBASIC-0.26□□□□□ -2.45
TCRAP04437 AL117336.2-201ENST00000602435 335 ntBASIC-0.26□□□□□ -2.45
TCRAP04437 MTND3P19-201ENST00000603825 345 ntBASIC-0.26□□□□□ -2.45
TCRAP04437 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC-0.26□□□□□ -2.45
TCRAP04437 RNU4-41P-201ENST00000364426 143 ntBASIC-0.27□□□□□ -2.45
TCRAP04437 RNU6-302P-201ENST00000365249 107 ntBASIC-0.27□□□□□ -2.45
TCRAP04437 MIR558-201ENST00000384920 94 ntBASIC-0.27□□□□□ -2.45
TCRAP04437 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC-0.27□□□□□ -2.45
TCRAP04437 MTCO2P29-201ENST00000465212 189 ntBASIC-0.27□□□□□ -2.45
TCRAP04437 RPL23AP54-201ENST00000495129 419 ntBASIC-0.27□□□□□ -2.45
TCRAP04437 RNU7-28P-201ENST00000516759 62 ntBASIC-0.27□□□□□ -2.45
TCRAP04437 RNU11-2P-201ENST00000516898 142 ntBASIC-0.27□□□□□ -2.45
TCRAP04437 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC-0.27□□□□□ -2.45
TCRAP04437 AC112693.2-201ENST00000556538 232 ntBASIC-0.27□□□□□ -2.45
TCRAP04437 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC-0.27□□□□□ -2.45
TCRAP04437 RNA5SP517-201ENST00000364724 117 ntBASIC-0.28□□□□□ -2.45
TCRAP04437 RNU6-39P-201ENST00000384344 107 ntBASIC-0.28□□□□□ -2.45
TCRAP04437 RNU2-8P-201ENST00000410727 190 ntBASIC-0.28□□□□□ -2.45
TCRAP04437 RPL37P21-201ENST00000435890 276 ntBASIC-0.28□□□□□ -2.45
TCRAP04437 RPS24P1-201ENST00000438550 371 ntBASIC-0.28□□□□□ -2.45
TCRAP04437 EEF1A1P39-201ENST00000440791 250 ntBASIC-0.28□□□□□ -2.45
TCRAP04437 RN7SKP164-201ENST00000516138 266 ntBASIC-0.28□□□□□ -2.45
TCRAP04437 AC005730.3-201ENST00000583067 366 ntBASIC-0.28□□□□□ -2.45
TCRAP04437 AC104408.1-201ENST00000605241 170 ntBASIC-0.28□□□□□ -2.45
TCRAP04437 AL121895.2-201ENST00000619558 447 ntBASIC-0.28□□□□□ -2.45
TCRAP04437 AC008873.1-201ENST00000625051 138 ntBASIC-0.28□□□□□ -2.45
TCRAP04437 AC019226.2-201ENST00000625973 424 ntBASIC-0.28□□□□□ -2.45
TCRAP04437 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.29□□□□□ -2.46
TCRAP04437 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC-0.29□□□□□ -2.46
TCRAP04437 Y_RNA.112-201ENST00000363250 102 ntBASIC-0.29□□□□□ -2.46
TCRAP04437 SNORD114-26-201ENST00000363543 72 ntBASIC-0.29□□□□□ -2.46
TCRAP04437 Y_RNA.258-201ENST00000364613 105 ntBASIC-0.29□□□□□ -2.46
TCRAP04437 Y_RNA.265-201ENST00000364677 108 ntBASIC-0.29□□□□□ -2.46
TCRAP04437 Y_RNA.336-201ENST00000365307 109 ntBASIC-0.29□□□□□ -2.46
TCRAP04437 RNU6-514P-201ENST00000384208 107 ntBASIC-0.29□□□□□ -2.46
TCRAP04437 MIR526A1-201ENST00000384897 85 ntBASIC-0.29□□□□□ -2.46
TCRAP04437 ERHP2-201ENST00000402323 299 ntBASIC-0.29□□□□□ -2.46
TCRAP04437 AC004866.1-201ENST00000411748 78 ntBASIC-0.29□□□□□ -2.46
TCRAP04437 RPS26P42-201ENST00000413485 326 ntBASIC-0.29□□□□□ -2.46
TCRAP04437 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC-0.29□□□□□ -2.46
TCRAP04437 MTATP6P16-201ENST00000434543 526 ntBASIC-0.29□□□□□ -2.46
TCRAP04437 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC-0.29□□□□□ -2.46
TCRAP04437 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC-0.29□□□□□ -2.46
TCRAP04437 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC-0.29□□□□□ -2.46
TCRAP04437 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC-0.29□□□□□ -2.46
TCRAP04437 SNORA40.12-201ENST00000516329 111 ntBASIC-0.29□□□□□ -2.46
TCRAP04437 RNA5SP330-201ENST00000517096 96 ntBASIC-0.29□□□□□ -2.46
TCRAP04437 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC-0.29□□□□□ -2.46
TCRAP04437 AC090517.2-201ENST00000614966 680 ntBASIC-0.29□□□□□ -2.46
TCRAP04437 Six3os1_7.1-201ENST00000621512 201 ntBASIC-0.29□□□□□ -2.46
TCRAP04437 SNORA25.3-201ENST00000363205 127 ntBASIC-0.3□□□□□ -2.46
TCRAP04437 Y_RNA.465-201ENST00000384293 102 ntBASIC-0.3□□□□□ -2.46
TCRAP04437 Y_RNA.472-201ENST00000384322 102 ntBASIC-0.3□□□□□ -2.46
TCRAP04437 RNU6-1297P-201ENST00000384415 104 ntBASIC-0.3□□□□□ -2.46
TCRAP04437 MIR489-201ENST00000384923 84 ntBASIC-0.3□□□□□ -2.46
TCRAP04437 AL136310.1-201ENST00000404926 654 ntBASIC-0.3□□□□□ -2.46
TCRAP04437 AL139396.1-201ENST00000421137 167 ntBASIC-0.3□□□□□ -2.46
TCRAP04437 USP9YP29-201ENST00000445112 563 ntBASIC-0.3□□□□□ -2.46
TCRAP04437 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC-0.3□□□□□ -2.46
TCRAP04437 MIR3612-201ENST00000579753 87 ntBASIC-0.3□□□□□ -2.46
TCRAP04437 AL592221.1-201ENST00000605266 382 ntBASIC-0.3□□□□□ -2.46
TCRAP04437 AC068792.1-201ENST00000621354 417 ntBASIC-0.3□□□□□ -2.46
TCRAP04437 AL078596.1-201ENST00000624856 447 ntBASIC-0.3□□□□□ -2.46
TCRAP04437 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC-0.3□□□□□ -2.46
TCRAP04437 SNORD118-201ENST00000363593 134 ntBASIC-0.31□□□□□ -2.46
TCRAP04437 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC-0.31□□□□□ -2.46
TCRAP04437 RNU6-641P-201ENST00000384006 107 ntBASIC-0.31□□□□□ -2.46
TCRAP04437 SNORA67.2-201ENST00000384300 149 ntBASIC-0.31□□□□□ -2.46
TCRAP04437 Y_RNA.551-201ENST00000384661 102 ntBASIC-0.31□□□□□ -2.46
TCRAP04437 SEPT7P4-201ENST00000437076 306 ntBASIC-0.31□□□□□ -2.46
TCRAP04437 EXOSC3P1-201ENST00000448649 500 ntBASIC-0.31□□□□□ -2.46
TCRAP04437 MTCO3P8-201ENST00000453691 755 ntBASIC-0.31□□□□□ -2.46
TCRAP04437 OFD1P4Y-201ENST00000455273 1179 ntBASIC-0.31□□□□□ -2.46
TCRAP04437 SNORD114-5-201ENST00000362928 70 ntBASIC-0.32□□□□□ -2.46
TCRAP04437 MIR644A-201ENST00000385262 94 ntBASIC-0.32□□□□□ -2.46
TCRAP04437 MTCYBP36-201ENST00000404146 440 ntBASIC-0.32□□□□□ -2.46
TCRAP04437 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC-0.32□□□□□ -2.46
TCRAP04437 snoU13.6-201ENST00000458785 104 ntBASIC-0.32□□□□□ -2.46
TCRAP04437 AP001372.4-201ENST00000524889 472 ntBASIC-0.32□□□□□ -2.46
TCRAP04437 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC-0.32□□□□□ -2.46
TCRAP04437 AP003049.1-201ENST00000529418 457 ntBASIC-0.32□□□□□ -2.46
TCRAP04437 AC103996.1-201ENST00000555468 102 ntBASIC-0.32□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms