Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AC010468.3-201ENST00000508225 458 ntBASIC-0.71□□□□□ -2.52
APOBP04114 AC112206.4-201ENST00000515142 405 ntBASIC-0.71□□□□□ -2.52
APOBP04114 RNU6-123P-201ENST00000516163 102 ntBASIC-0.71□□□□□ -2.52
APOBP04114 AC106754.1-201ENST00000562632 1513 ntBASIC-0.71□□□□□ -2.52
APOBP04114 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC-0.71□□□□□ -2.52
APOBP04114 LARP1BP3-201ENST00000437229 869 ntBASIC-0.71□□□□□ -2.52
APOBP04114 RNU6-31P-201ENST00000384388 108 ntBASIC-0.72□□□□□ -2.52
APOBP04114 AL590002.1-201ENST00000406554 418 ntBASIC-0.72□□□□□ -2.52
APOBP04114 FCF1P9-201ENST00000412546 282 ntBASIC-0.72□□□□□ -2.52
APOBP04114 AC013262.1-201ENST00000426710 252 ntBASIC-0.72□□□□□ -2.52
APOBP04114 AC097462.1-201ENST00000514125 324 ntBASIC-0.72□□□□□ -2.52
APOBP04114 RNU6-977P-201ENST00000516411 103 ntBASIC-0.72□□□□□ -2.52
APOBP04114 MIR5706-201ENST00000579841 80 ntBASIC-0.72□□□□□ -2.52
APOBP04114 MTND5P31-201ENST00000419366 1374 ntBASIC-0.72□□□□□ -2.52
APOBP04114 RNU6-369P-201ENST00000362515 102 ntBASIC-0.72□□□□□ -2.52
APOBP04114 RPL21P38-201ENST00000418090 167 ntBASIC-0.72□□□□□ -2.52
APOBP04114 USP9YP14-201ENST00000430663 563 ntBASIC-0.72□□□□□ -2.52
APOBP04114 AC092170.1-201ENST00000440211 356 ntBASIC-0.72□□□□□ -2.52
APOBP04114 AC134698.4-201ENST00000523451 826 ntBASIC-0.72□□□□□ -2.52
APOBP04114 MIR3152-201ENST00000579801 74 ntBASIC-0.72□□□□□ -2.52
APOBP04114 AC068790.2-201ENST00000602601 557 ntBASIC-0.72□□□□□ -2.52
APOBP04114 AL359999.1-201ENST00000604513 294 ntBASIC-0.72□□□□□ -2.52
APOBP04114 AC016597.2-201ENST00000613256 341 ntBASIC-0.72□□□□□ -2.52
APOBP04114 AC008250.2-201ENST00000615261 205 ntBASIC-0.72□□□□□ -2.52
APOBP04114 RNU6-312P-201ENST00000364629 107 ntBASIC-0.72□□□□□ -2.52
APOBP04114 SNORA24.1-201ENST00000384401 135 ntBASIC-0.72□□□□□ -2.52
APOBP04114 AL627311.1-201ENST00000431514 115 ntBASIC-0.72□□□□□ -2.52
APOBP04114 AC006026.2-201ENST00000457376 180 ntBASIC-0.72□□□□□ -2.52
APOBP04114 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.72□□□□□ -2.52
APOBP04114 RNU2-34P-201ENST00000516534 121 ntBASIC-0.72□□□□□ -2.52
APOBP04114 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC-0.72□□□□□ -2.52
APOBP04114 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.72□□□□□ -2.53
APOBP04114 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.72□□□□□ -2.53
APOBP04114 Y_RNA.430-201ENST00000384081 110 ntBASIC-0.72□□□□□ -2.53
APOBP04114 RNU6-622P-201ENST00000384272 103 ntBASIC-0.72□□□□□ -2.53
APOBP04114 AL606834.3-201ENST00000602615 496 ntBASIC-0.72□□□□□ -2.53
APOBP04114 AC083799.1-201ENST00000366451 910 ntBASIC-0.73□□□□□ -2.53
APOBP04114 RNU6-447P-201ENST00000410293 104 ntBASIC-0.73□□□□□ -2.53
APOBP04114 RNU6-1118P-201ENST00000410382 104 ntBASIC-0.73□□□□□ -2.53
APOBP04114 RNU6-1076P-201ENST00000410397 104 ntBASIC-0.73□□□□□ -2.53
APOBP04114 RNU6-355P-201ENST00000410427 104 ntBASIC-0.73□□□□□ -2.53
APOBP04114 RNU6-791P-201ENST00000410467 104 ntBASIC-0.73□□□□□ -2.53
APOBP04114 RNU6-705P-201ENST00000410601 104 ntBASIC-0.73□□□□□ -2.53
APOBP04114 RNU6-1100P-201ENST00000410691 104 ntBASIC-0.73□□□□□ -2.53
APOBP04114 RNU6-860P-201ENST00000410860 104 ntBASIC-0.73□□□□□ -2.53
APOBP04114 RNU6-1217P-201ENST00000411276 104 ntBASIC-0.73□□□□□ -2.53
APOBP04114 RNU6-785P-201ENST00000411324 104 ntBASIC-0.73□□□□□ -2.53
APOBP04114 MTCYBP5-201ENST00000423752 1135 ntBASIC-0.73□□□□□ -2.53
APOBP04114 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC-0.73□□□□□ -2.53
APOBP04114 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC-0.73□□□□□ -2.53
APOBP04114 AC009237.7-201ENST00000447357 229 ntBASIC-0.73□□□□□ -2.53
APOBP04114 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC-0.73□□□□□ -2.53
APOBP04114 RNU6-1146P-201ENST00000516282 102 ntBASIC-0.73□□□□□ -2.53
APOBP04114 DEFB130C-202ENST00000530001 230 ntBASIC-0.73□□□□□ -2.53
APOBP04114 AP003168.1-201ENST00000530091 307 ntBASIC-0.73□□□□□ -2.53
APOBP04114 AC133485.4-201ENST00000561835 220 ntBASIC-0.73□□□□□ -2.53
APOBP04114 U6.90-201ENST00000614007 104 ntBASIC-0.73□□□□□ -2.53
APOBP04114 U6.70-201ENST00000620287 104 ntBASIC-0.73□□□□□ -2.53
APOBP04114 RNU6-487P-201ENST00000365430 104 ntBASIC-0.73□□□□□ -2.53
APOBP04114 MTND3P17-201ENST00000416968 344 ntBASIC-0.73□□□□□ -2.53
APOBP04114 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC-0.73□□□□□ -2.53
APOBP04114 MTCO3P27-201ENST00000514397 196 ntBASIC-0.73□□□□□ -2.53
APOBP04114 RNU6-934P-201ENST00000365154 107 ntBASIC-0.73□□□□□ -2.53
APOBP04114 AC106883.1-201ENST00000418805 562 ntBASIC-0.73□□□□□ -2.53
APOBP04114 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC-0.73□□□□□ -2.53
APOBP04114 LAMTOR3P2-201ENST00000504479 232 ntBASIC-0.73□□□□□ -2.53
APOBP04114 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-0.73□□□□□ -2.53
APOBP04114 SNORD115-42-201ENST00000364273 82 ntBASIC-0.74□□□□□ -2.53
APOBP04114 AL354692.1-201ENST00000423044 315 ntBASIC-0.74□□□□□ -2.53
APOBP04114 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC-0.74□□□□□ -2.53
APOBP04114 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC-0.74□□□□□ -2.53
APOBP04114 Y_RNA.679-201ENST00000516416 91 ntBASIC-0.74□□□□□ -2.53
APOBP04114 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.74□□□□□ -2.53
APOBP04114 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC-0.74□□□□□ -2.53
APOBP04114 FRG1KP-201ENST00000623592 341 ntBASIC-0.74□□□□□ -2.53
APOBP04114 AC091912.2-201ENST00000624798 167 ntBASIC-0.74□□□□□ -2.53
APOBP04114 AP000568.1-201ENST00000282964 442 ntBASIC-0.74□□□□□ -2.53
APOBP04114 MIR301A-201ENST00000385261 86 ntBASIC-0.74□□□□□ -2.53
APOBP04114 HIGD1AP15-201ENST00000416198 280 ntBASIC-0.74□□□□□ -2.53
APOBP04114 AP000870.1-201ENST00000472927 406 ntBASIC-0.74□□□□□ -2.53
APOBP04114 AC009646.1-201ENST00000510455 318 ntBASIC-0.74□□□□□ -2.53
APOBP04114 RNU6-1041P-201ENST00000516254 102 ntBASIC-0.74□□□□□ -2.53
APOBP04114 RNU5F-4P-201ENST00000516581 114 ntBASIC-0.74□□□□□ -2.53
APOBP04114 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC-0.74□□□□□ -2.53
APOBP04114 AL442067.1-201ENST00000613261 223 ntBASIC-0.74□□□□□ -2.53
APOBP04114 U6.107-201ENST00000637108 79 ntBASIC-0.74□□□□□ -2.53
APOBP04114 RNU4-56P-201ENST00000364700 142 ntBASIC-0.74□□□□□ -2.53
APOBP04114 RNY4P28-201ENST00000365281 93 ntBASIC-0.74□□□□□ -2.53
APOBP04114 RNU6-932P-201ENST00000391108 106 ntBASIC-0.74□□□□□ -2.53
APOBP04114 AL606517.2-201ENST00000442855 241 ntBASIC-0.74□□□□□ -2.53
APOBP04114 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.74□□□□□ -2.53
APOBP04114 AL590491.3-201ENST00000610731 82 ntBASIC-0.74□□□□□ -2.53
APOBP04114 AC092656.1-203ENST00000624134 423 ntBASIC-0.74□□□□□ -2.53
APOBP04114 Y_RNA.190-201ENST00000363964 101 ntBASIC-0.74□□□□□ -2.53
APOBP04114 SNORD32B-201ENST00000364460 84 ntBASIC-0.74□□□□□ -2.53
APOBP04114 MTND1P4-201ENST00000435196 415 ntBASIC-0.74□□□□□ -2.53
APOBP04114 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC-0.74□□□□□ -2.53
APOBP04114 AL500527.2-201ENST00000454105 95 ntBASIC-0.74□□□□□ -2.53
APOBP04114 RNA5SP33-201ENST00000516687 98 ntBASIC-0.74□□□□□ -2.53
APOBP04114 RNU6-448P-201ENST00000517052 107 ntBASIC-0.74□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms