Protein–RNA interactions for Protein: P03956

MMP1, Interstitial collagenase, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP1P03956 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.48□□□□□ -2.17
MMP1P03956 SNORA44.1-201ENST00000517031 108 ntBASIC1.48□□□□□ -2.17
MMP1P03956 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.48□□□□□ -2.17
MMP1P03956 EIF4A1P12-201ENST00000551910 141 ntBASIC1.48□□□□□ -2.17
MMP1P03956 Y_RNA.112-201ENST00000363250 102 ntBASIC1.47□□□□□ -2.17
MMP1P03956 RNU1-22P-201ENST00000363334 158 ntBASIC1.47□□□□□ -2.17
MMP1P03956 RNU6-1059P-201ENST00000363752 98 ntBASIC1.47□□□□□ -2.17
MMP1P03956 U3.9-201ENST00000363823 204 ntBASIC1.47□□□□□ -2.17
MMP1P03956 RNU6-933P-201ENST00000384424 107 ntBASIC1.47□□□□□ -2.17
MMP1P03956 MIR487A-201ENST00000385009 80 ntBASIC1.47□□□□□ -2.17
MMP1P03956 MT-TL1-201ENST00000386347 75 ntBASIC1.47□□□□□ -2.17
MMP1P03956 SNORA40.6-201ENST00000391153 128 ntBASIC1.47□□□□□ -2.17
MMP1P03956 MIR934-201ENST00000401241 83 ntBASIC1.47□□□□□ -2.17
MMP1P03956 RNU2-41P-201ENST00000410991 178 ntBASIC1.47□□□□□ -2.17
MMP1P03956 MTND3P8-201ENST00000412909 339 ntBASIC1.47□□□□□ -2.17
MMP1P03956 MTND4LP16-201ENST00000440828 295 ntBASIC1.47□□□□□ -2.17
MMP1P03956 DAP3P1-201ENST00000441522 278 ntBASIC1.47□□□□□ -2.17
MMP1P03956 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.47□□□□□ -2.17
MMP1P03956 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.47□□□□□ -2.17
MMP1P03956 PCMTD1P1-201ENST00000455560 355 ntBASIC1.47□□□□□ -2.17
MMP1P03956 RPS29P23-201ENST00000458635 123 ntBASIC1.47□□□□□ -2.17
MMP1P03956 MTND5P5-201ENST00000503764 376 ntBASIC1.47□□□□□ -2.17
MMP1P03956 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.47□□□□□ -2.17
MMP1P03956 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.47□□□□□ -2.17
MMP1P03956 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.47□□□□□ -2.17
MMP1P03956 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.47□□□□□ -2.17
MMP1P03956 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC1.47□□□□□ -2.17
MMP1P03956 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.47□□□□□ -2.17
MMP1P03956 SUB1P4-201ENST00000566062 339 ntBASIC1.47□□□□□ -2.17
MMP1P03956 AC109446.1-201ENST00000566172 220 ntBASIC1.47□□□□□ -2.17
MMP1P03956 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.47□□□□□ -2.17
MMP1P03956 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.47□□□□□ -2.17
MMP1P03956 MIR6734-201ENST00000621166 68 ntBASIC1.47□□□□□ -2.17
MMP1P03956 AC022513.1-201ENST00000624512 117 ntBASIC1.47□□□□□ -2.17
MMP1P03956 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.47□□□□□ -2.17
MMP1P03956 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
MMP1P03956 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.46□□□□□ -2.18
MMP1P03956 MIR340-201ENST00000362125 95 ntBASIC1.46□□□□□ -2.18
MMP1P03956 MIR96-201ENST00000362288 78 ntBASIC1.46□□□□□ -2.18
MMP1P03956 Y_RNA.72-201ENST00000362894 103 ntBASIC1.46□□□□□ -2.18
MMP1P03956 Y_RNA.339-201ENST00000365325 102 ntBASIC1.46□□□□□ -2.18
MMP1P03956 RNU6-968P-201ENST00000384076 107 ntBASIC1.46□□□□□ -2.18
MMP1P03956 RNU6-790P-201ENST00000384479 105 ntBASIC1.46□□□□□ -2.18
MMP1P03956 MIR30A-201ENST00000385092 71 ntBASIC1.46□□□□□ -2.18
MMP1P03956 RNU6-510P-201ENST00000391239 108 ntBASIC1.46□□□□□ -2.18
MMP1P03956 MIR208B-201ENST00000401172 77 ntBASIC1.46□□□□□ -2.18
MMP1P03956 MIR548K-201ENST00000408406 116 ntBASIC1.46□□□□□ -2.18
MMP1P03956 NCOR1P3-201ENST00000420479 303 ntBASIC1.46□□□□□ -2.18
MMP1P03956 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.46□□□□□ -2.18
MMP1P03956 AC027575.1-201ENST00000481064 460 ntBASIC1.46□□□□□ -2.18
MMP1P03956 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.46□□□□□ -2.18
MMP1P03956 RPL23AP75-201ENST00000491601 451 ntBASIC1.46□□□□□ -2.18
MMP1P03956 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.46□□□□□ -2.18
MMP1P03956 RNU6-970P-201ENST00000516312 107 ntBASIC1.46□□□□□ -2.18
MMP1P03956 Y_RNA.682-201ENST00000516457 100 ntBASIC1.46□□□□□ -2.18
MMP1P03956 RNU6-567P-201ENST00000516746 107 ntBASIC1.46□□□□□ -2.18
MMP1P03956 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.46□□□□□ -2.18
MMP1P03956 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.46□□□□□ -2.18
MMP1P03956 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.46□□□□□ -2.18
MMP1P03956 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.46□□□□□ -2.18
MMP1P03956 AC124303.1-201ENST00000605703 360 ntBASIC1.46□□□□□ -2.18
MMP1P03956 AC019193.3-201ENST00000609144 554 ntBASIC1.46□□□□□ -2.18
MMP1P03956 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.46□□□□□ -2.18
MMP1P03956 AC093913.1-201ENST00000614178 329 ntBASIC1.46□□□□□ -2.18
MMP1P03956 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.46□□□□□ -2.18
MMP1P03956 Y_RNA.160-201ENST00000363677 92 ntBASIC1.45□□□□□ -2.18
MMP1P03956 Y_RNA.184-201ENST00000363884 108 ntBASIC1.45□□□□□ -2.18
MMP1P03956 RNU6-1013P-201ENST00000384180 107 ntBASIC1.45□□□□□ -2.18
MMP1P03956 RNU6-842P-201ENST00000384269 107 ntBASIC1.45□□□□□ -2.18
MMP1P03956 MIR549A-201ENST00000385268 96 ntBASIC1.45□□□□□ -2.18
MMP1P03956 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
MMP1P03956 SNORA12.2-201ENST00000391040 156 ntBASIC1.45□□□□□ -2.18
MMP1P03956 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.45□□□□□ -2.18
MMP1P03956 RPS26P42-201ENST00000413485 326 ntBASIC1.45□□□□□ -2.18
MMP1P03956 PDCL2P1-201ENST00000419302 352 ntBASIC1.45□□□□□ -2.18
MMP1P03956 USP9YP30-201ENST00000430729 455 ntBASIC1.45□□□□□ -2.18
MMP1P03956 Z82188.1-201ENST00000436709 154 ntBASIC1.45□□□□□ -2.18
MMP1P03956 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
MMP1P03956 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC1.45□□□□□ -2.18
MMP1P03956 AC112492.4-201ENST00000456549 352 ntBASIC1.45□□□□□ -2.18
MMP1P03956 AC010409.1-201ENST00000487382 476 ntBASIC1.45□□□□□ -2.18
MMP1P03956 RNU6-1098P-201ENST00000516772 96 ntBASIC1.45□□□□□ -2.18
MMP1P03956 AC011604.1-201ENST00000545978 196 ntBASIC1.45□□□□□ -2.18
MMP1P03956 AC084364.2-201ENST00000546924 395 ntBASIC1.45□□□□□ -2.18
MMP1P03956 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.45□□□□□ -2.18
MMP1P03956 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.45□□□□□ -2.18
MMP1P03956 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.45□□□□□ -2.18
MMP1P03956 MIR4285-201ENST00000581001 85 ntBASIC1.45□□□□□ -2.18
MMP1P03956 POLR3GP2-201ENST00000588366 668 ntBASIC1.45□□□□□ -2.18
MMP1P03956 AC011712.1-201ENST00000588959 234 ntBASIC1.45□□□□□ -2.18
MMP1P03956 AC016727.2-201ENST00000603988 621 ntBASIC1.45□□□□□ -2.18
MMP1P03956 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.45□□□□□ -2.18
MMP1P03956 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.45□□□□□ -2.18
MMP1P03956 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.45□□□□□ -2.18
MMP1P03956 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.45□□□□□ -2.18
MMP1P03956 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
MMP1P03956 MIR424-201ENST00000362227 98 ntBASIC1.44□□□□□ -2.18
MMP1P03956 RNU1-76P-201ENST00000362903 159 ntBASIC1.44□□□□□ -2.18
MMP1P03956 Y_RNA.473-201ENST00000384333 102 ntBASIC1.44□□□□□ -2.18
MMP1P03956 RNU6-1093P-201ENST00000391194 107 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 124.1 ms