Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 RNU6-105P-201ENST00000363909 104 ntBASIC2.83□□□□□ -1.96
COL3A1P02461 RNU6-923P-201ENST00000364753 107 ntBASIC2.83□□□□□ -1.96
COL3A1P02461 Y_RNA.308-201ENST00000365043 101 ntBASIC2.83□□□□□ -1.96
COL3A1P02461 Y_RNA.343-201ENST00000365354 112 ntBASIC2.83□□□□□ -1.96
COL3A1P02461 RNU6-1286P-201ENST00000383871 107 ntBASIC2.83□□□□□ -1.96
COL3A1P02461 Y_RNA.435-201ENST00000384095 112 ntBASIC2.83□□□□□ -1.96
COL3A1P02461 RNU6-22P-201ENST00000384355 107 ntBASIC2.83□□□□□ -1.96
COL3A1P02461 RNU6-1289P-201ENST00000384431 106 ntBASIC2.83□□□□□ -1.96
COL3A1P02461 RNA5SP181-201ENST00000410246 98 ntBASIC2.83□□□□□ -1.96
COL3A1P02461 RNU2-68P-201ENST00000410878 191 ntBASIC2.83□□□□□ -1.96
COL3A1P02461 AC079780.1-201ENST00000428259 207 ntBASIC2.83□□□□□ -1.96
COL3A1P02461 AC007919.1-201ENST00000429380 217 ntBASIC2.83□□□□□ -1.96
COL3A1P02461 CR769767.1-201ENST00000436337 346 ntBASIC2.83□□□□□ -1.96
COL3A1P02461 AL031659.1-201ENST00000447075 539 ntBASIC2.83□□□□□ -1.96
COL3A1P02461 AP001025.1-201ENST00000486139 332 ntBASIC2.83□□□□□ -1.96
COL3A1P02461 RNU6-1256P-201ENST00000516539 103 ntBASIC2.83□□□□□ -1.96
COL3A1P02461 RNU6-1198P-201ENST00000516904 67 ntBASIC2.83□□□□□ -1.96
COL3A1P02461 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.83□□□□□ -1.96
COL3A1P02461 MIR4458-201ENST00000578872 75 ntBASIC2.83□□□□□ -1.96
COL3A1P02461 AC006001.4-201ENST00000622243 395 ntBASIC2.83□□□□□ -1.96
COL3A1P02461 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.83□□□□□ -1.96
COL3A1P02461 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.83□□□□□ -1.96
COL3A1P02461 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.82□□□□□ -1.96
COL3A1P02461 AC091564.4-201ENST00000533934 2194 ntBASIC2.82□□□□□ -1.96
COL3A1P02461 RNU6-1290P-201ENST00000362957 109 ntBASIC2.82□□□□□ -1.96
COL3A1P02461 RNU6-137P-201ENST00000363680 108 ntBASIC2.82□□□□□ -1.96
COL3A1P02461 Y_RNA.230-201ENST00000364348 109 ntBASIC2.82□□□□□ -1.96
COL3A1P02461 RNU1-91P-201ENST00000364746 163 ntBASIC2.82□□□□□ -1.96
COL3A1P02461 RNU6-142P-201ENST00000384019 107 ntBASIC2.82□□□□□ -1.96
COL3A1P02461 RNU6-72P-201ENST00000384285 79 ntBASIC2.82□□□□□ -1.96
COL3A1P02461 SNORA40.19-201ENST00000390846 128 ntBASIC2.82□□□□□ -1.96
COL3A1P02461 SNORA46.1-201ENST00000391069 153 ntBASIC2.82□□□□□ -1.96
COL3A1P02461 NDUFB4P7-201ENST00000423198 363 ntBASIC2.82□□□□□ -1.96
COL3A1P02461 AP000870.1-201ENST00000472927 406 ntBASIC2.82□□□□□ -1.96
COL3A1P02461 RNA5SP165-201ENST00000517142 115 ntBASIC2.82□□□□□ -1.96
COL3A1P02461 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.82□□□□□ -1.96
COL3A1P02461 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
COL3A1P02461 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
COL3A1P02461 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.81□□□□□ -1.96
COL3A1P02461 Y_RNA.262-201ENST00000364641 102 ntBASIC2.81□□□□□ -1.96
COL3A1P02461 Y_RNA.272-201ENST00000364696 102 ntBASIC2.81□□□□□ -1.96
COL3A1P02461 Y_RNA.418-201ENST00000384029 102 ntBASIC2.81□□□□□ -1.96
COL3A1P02461 RNU6-20P-201ENST00000384106 107 ntBASIC2.81□□□□□ -1.96
COL3A1P02461 Y_RNA.441-201ENST00000384123 112 ntBASIC2.81□□□□□ -1.96
COL3A1P02461 RNU6-959P-201ENST00000384671 107 ntBASIC2.81□□□□□ -1.96
COL3A1P02461 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
COL3A1P02461 RNA5SP213-201ENST00000391031 106 ntBASIC2.81□□□□□ -1.96
COL3A1P02461 RNU6-1245P-201ENST00000411130 106 ntBASIC2.81□□□□□ -1.96
COL3A1P02461 AC098614.2-201ENST00000426040 255 ntBASIC2.81□□□□□ -1.96
COL3A1P02461 WARS2P1-201ENST00000429678 537 ntBASIC2.81□□□□□ -1.96
COL3A1P02461 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.81□□□□□ -1.96
COL3A1P02461 POLR2KP2-201ENST00000438155 177 ntBASIC2.81□□□□□ -1.96
COL3A1P02461 AL645939.1-201ENST00000453429 797 ntBASIC2.81□□□□□ -1.96
COL3A1P02461 AC091959.1-201ENST00000495857 238 ntBASIC2.81□□□□□ -1.96
COL3A1P02461 RNY3P16-201ENST00000516338 101 ntBASIC2.81□□□□□ -1.96
COL3A1P02461 MIR4782-201ENST00000577987 79 ntBASIC2.81□□□□□ -1.96
COL3A1P02461 MIR4423-201ENST00000580922 80 ntBASIC2.81□□□□□ -1.96
COL3A1P02461 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC2.81□□□□□ -1.96
COL3A1P02461 RNA5SP108-201ENST00000605921 117 ntBASIC2.81□□□□□ -1.96
COL3A1P02461 AC005828.6-201ENST00000606610 232 ntBASIC2.81□□□□□ -1.96
COL3A1P02461 AL359198.2-201ENST00000611836 194 ntBASIC2.81□□□□□ -1.96
COL3A1P02461 AL365265.1-201ENST00000621045 234 ntBASIC2.81□□□□□ -1.96
COL3A1P02461 MTND1P7-201ENST00000632801 297 ntBASIC2.81□□□□□ -1.96
COL3A1P02461 U6.98-201ENST00000637157 84 ntBASIC2.81□□□□□ -1.96
COL3A1P02461 U6.99-201ENST00000637524 83 ntBASIC2.81□□□□□ -1.96
COL3A1P02461 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
COL3A1P02461 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
COL3A1P02461 AL139811.1-201ENST00000424779 2299 ntBASIC2.8□□□□□ -1.96
COL3A1P02461 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
COL3A1P02461 RBBP8P1-201ENST00000449447 1844 ntBASIC2.8□□□□□ -1.96
COL3A1P02461 Y_RNA.136-201ENST00000363444 102 ntBASIC2.8□□□□□ -1.96
COL3A1P02461 RNU6-1175P-201ENST00000365200 107 ntBASIC2.8□□□□□ -1.96
COL3A1P02461 RNU6-281P-201ENST00000384212 103 ntBASIC2.8□□□□□ -1.96
COL3A1P02461 Y_RNA.497-201ENST00000384447 98 ntBASIC2.8□□□□□ -1.96
COL3A1P02461 RNU6-417P-201ENST00000384712 107 ntBASIC2.8□□□□□ -1.96
COL3A1P02461 Y_RNA.570-201ENST00000384750 101 ntBASIC2.8□□□□□ -1.96
COL3A1P02461 Y_RNA.580-201ENST00000391004 95 ntBASIC2.8□□□□□ -1.96
COL3A1P02461 AL590383.1-201ENST00000428602 75 ntBASIC2.8□□□□□ -1.96
COL3A1P02461 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.8□□□□□ -1.96
COL3A1P02461 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.8□□□□□ -1.96
COL3A1P02461 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.8□□□□□ -1.96
COL3A1P02461 RNU6-479P-201ENST00000516348 105 ntBASIC2.8□□□□□ -1.96
COL3A1P02461 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.8□□□□□ -1.96
COL3A1P02461 AP000867.2-201ENST00000532468 320 ntBASIC2.8□□□□□ -1.96
COL3A1P02461 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.8□□□□□ -1.96
COL3A1P02461 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.8□□□□□ -1.96
COL3A1P02461 AL356157.2-201ENST00000605122 111 ntBASIC2.8□□□□□ -1.96
COL3A1P02461 AC135776.4-201ENST00000624300 1904 ntBASIC2.8□□□□□ -1.96
COL3A1P02461 AL592437.2-201ENST00000421655 2434 ntBASIC2.8□□□□□ -1.96
COL3A1P02461 ZNF720P1-201ENST00000562403 1939 ntBASIC2.79□□□□□ -1.96
COL3A1P02461 RNU6-741P-201ENST00000383889 107 ntBASIC2.79□□□□□ -1.96
COL3A1P02461 RNU6-629P-201ENST00000384061 103 ntBASIC2.79□□□□□ -1.96
COL3A1P02461 Y_RNA.446-201ENST00000384178 104 ntBASIC2.79□□□□□ -1.96
COL3A1P02461 SNORA67.3-201ENST00000384366 140 ntBASIC2.79□□□□□ -1.96
COL3A1P02461 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
COL3A1P02461 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
COL3A1P02461 AC244098.2-201ENST00000422068 99 ntBASIC2.79□□□□□ -1.96
COL3A1P02461 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.79□□□□□ -1.96
COL3A1P02461 AC024067.1-201ENST00000426199 223 ntBASIC2.79□□□□□ -1.96
COL3A1P02461 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms