Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.04□□□□□ -2.24
HLA-DQA1P01909 MIR5696-201ENST00000578474 85 ntBASIC1.04□□□□□ -2.24
HLA-DQA1P01909 PRR13P7-201ENST00000605538 430 ntBASIC1.04□□□□□ -2.24
HLA-DQA1P01909 AC097065.2-201ENST00000608159 533 ntBASIC1.04□□□□□ -2.24
HLA-DQA1P01909 MIR6715A-201ENST00000615929 79 ntBASIC1.04□□□□□ -2.24
HLA-DQA1P01909 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.04□□□□□ -2.24
HLA-DQA1P01909 AL078596.1-201ENST00000624856 447 ntBASIC1.04□□□□□ -2.24
HLA-DQA1P01909 AL359697.1-201ENST00000624879 587 ntBASIC1.04□□□□□ -2.24
HLA-DQA1P01909 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.04□□□□□ -2.24
HLA-DQA1P01909 ICE2P2-201ENST00000483823 2787 ntBASIC1.03□□□□□ -2.24
HLA-DQA1P01909 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.03□□□□□ -2.24
HLA-DQA1P01909 U8.1-201ENST00000362843 134 ntBASIC1.03□□□□□ -2.24
HLA-DQA1P01909 RNU6-727P-201ENST00000363592 107 ntBASIC1.03□□□□□ -2.24
HLA-DQA1P01909 RNU6-534P-201ENST00000364877 106 ntBASIC1.03□□□□□ -2.24
HLA-DQA1P01909 Y_RNA.295-201ENST00000364918 102 ntBASIC1.03□□□□□ -2.24
HLA-DQA1P01909 Y_RNA.319-201ENST00000365138 92 ntBASIC1.03□□□□□ -2.24
HLA-DQA1P01909 MIR1323-201ENST00000408090 73 ntBASIC1.03□□□□□ -2.24
HLA-DQA1P01909 MIR320B2-201ENST00000408479 138 ntBASIC1.03□□□□□ -2.24
HLA-DQA1P01909 RNU6-373P-201ENST00000411247 98 ntBASIC1.03□□□□□ -2.24
HLA-DQA1P01909 AL161935.2-201ENST00000414627 60 ntBASIC1.03□□□□□ -2.24
HLA-DQA1P01909 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.03□□□□□ -2.24
HLA-DQA1P01909 MTATP6P13-201ENST00000438531 667 ntBASIC1.03□□□□□ -2.24
HLA-DQA1P01909 SNRPGP13-201ENST00000442212 177 ntBASIC1.03□□□□□ -2.24
HLA-DQA1P01909 AC007677.1-201ENST00000445757 515 ntBASIC1.03□□□□□ -2.24
HLA-DQA1P01909 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.03□□□□□ -2.24
HLA-DQA1P01909 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.03□□□□□ -2.24
HLA-DQA1P01909 RPS26P55-201ENST00000471178 356 ntBASIC1.03□□□□□ -2.24
HLA-DQA1P01909 RNU6-864P-201ENST00000516256 108 ntBASIC1.03□□□□□ -2.24
HLA-DQA1P01909 RNA5SP481-201ENST00000516814 122 ntBASIC1.03□□□□□ -2.24
HLA-DQA1P01909 RNU6-1314P-201ENST00000517139 104 ntBASIC1.03□□□□□ -2.24
HLA-DQA1P01909 AC025647.1-201ENST00000517879 253 ntBASIC1.03□□□□□ -2.24
HLA-DQA1P01909 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.03□□□□□ -2.24
HLA-DQA1P01909 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.03□□□□□ -2.24
HLA-DQA1P01909 AC027288.2-201ENST00000553028 243 ntBASIC1.03□□□□□ -2.24
HLA-DQA1P01909 AC015720.1-201ENST00000565251 277 ntBASIC1.03□□□□□ -2.24
HLA-DQA1P01909 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.03□□□□□ -2.24
HLA-DQA1P01909 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.03□□□□□ -2.24
HLA-DQA1P01909 MIR4742-201ENST00000581069 85 ntBASIC1.03□□□□□ -2.24
HLA-DQA1P01909 AP003465.2-201ENST00000602571 373 ntBASIC1.03□□□□□ -2.24
HLA-DQA1P01909 AP001485.1-201ENST00000604799 199 ntBASIC1.03□□□□□ -2.24
HLA-DQA1P01909 AC009248.2-201ENST00000619826 254 ntBASIC1.03□□□□□ -2.24
HLA-DQA1P01909 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.03□□□□□ -2.24
HLA-DQA1P01909 snoZ196.1-201ENST00000625269 89 ntBASIC1.03□□□□□ -2.24
HLA-DQA1P01909 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
HLA-DQA1P01909 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
HLA-DQA1P01909 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
HLA-DQA1P01909 RNU6-1059P-201ENST00000363752 98 ntBASIC1.02□□□□□ -2.25
HLA-DQA1P01909 RNU6-873P-201ENST00000363833 107 ntBASIC1.02□□□□□ -2.25
HLA-DQA1P01909 SNORD115-32-201ENST00000364079 82 ntBASIC1.02□□□□□ -2.25
HLA-DQA1P01909 Y_RNA.533-201ENST00000384596 114 ntBASIC1.02□□□□□ -2.25
HLA-DQA1P01909 SNORD116-4-201ENST00000384733 96 ntBASIC1.02□□□□□ -2.25
HLA-DQA1P01909 MIR153-2-201ENST00000385225 87 ntBASIC1.02□□□□□ -2.25
HLA-DQA1P01909 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.02□□□□□ -2.25
HLA-DQA1P01909 SNORD115-47-201ENST00000391226 86 ntBASIC1.02□□□□□ -2.25
HLA-DQA1P01909 MIR1253-201ENST00000408273 105 ntBASIC1.02□□□□□ -2.25
HLA-DQA1P01909 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.02□□□□□ -2.25
HLA-DQA1P01909 RPL30P13-201ENST00000418873 348 ntBASIC1.02□□□□□ -2.25
HLA-DQA1P01909 CYCSP49-201ENST00000420810 319 ntBASIC1.02□□□□□ -2.25
HLA-DQA1P01909 snoU13.27-201ENST00000459278 104 ntBASIC1.02□□□□□ -2.25
HLA-DQA1P01909 RPS29P25-201ENST00000481709 171 ntBASIC1.02□□□□□ -2.25
HLA-DQA1P01909 AL163195.1-201ENST00000496941 348 ntBASIC1.02□□□□□ -2.25
HLA-DQA1P01909 MTND4P12-201ENST00000498999 1377 ntBASIC1.02□□□□□ -2.25
HLA-DQA1P01909 AC103851.1-201ENST00000506833 274 ntBASIC1.02□□□□□ -2.25
HLA-DQA1P01909 SNORA31.24-201ENST00000517232 57 ntBASIC1.02□□□□□ -2.25
HLA-DQA1P01909 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.02□□□□□ -2.25
HLA-DQA1P01909 MIR4422-201ENST00000581938 83 ntBASIC1.02□□□□□ -2.25
HLA-DQA1P01909 AC008873.1-201ENST00000625051 138 ntBASIC1.02□□□□□ -2.25
HLA-DQA1P01909 U6.108-201ENST00000637764 58 ntBASIC1.02□□□□□ -2.25
HLA-DQA1P01909 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.01□□□□□ -2.25
HLA-DQA1P01909 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.01□□□□□ -2.25
HLA-DQA1P01909 Y_RNA.48-201ENST00000362710 103 ntBASIC1.01□□□□□ -2.25
HLA-DQA1P01909 Y_RNA.415-201ENST00000384012 112 ntBASIC1.01□□□□□ -2.25
HLA-DQA1P01909 RNU6-245P-201ENST00000384020 107 ntBASIC1.01□□□□□ -2.25
HLA-DQA1P01909 RNU6-17P-201ENST00000384245 107 ntBASIC1.01□□□□□ -2.25
HLA-DQA1P01909 RNU6-18P-201ENST00000384527 107 ntBASIC1.01□□□□□ -2.25
HLA-DQA1P01909 RNU6-541P-201ENST00000384709 110 ntBASIC1.01□□□□□ -2.25
HLA-DQA1P01909 MIR194-1-201ENST00000384892 85 ntBASIC1.01□□□□□ -2.25
HLA-DQA1P01909 RNA5SP109-201ENST00000391010 116 ntBASIC1.01□□□□□ -2.25
HLA-DQA1P01909 MIR548F1-201ENST00000408667 84 ntBASIC1.01□□□□□ -2.25
HLA-DQA1P01909 AL354695.1-201ENST00000427935 228 ntBASIC1.01□□□□□ -2.25
HLA-DQA1P01909 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.01□□□□□ -2.25
HLA-DQA1P01909 FTH1P12-201ENST00000432137 551 ntBASIC1.01□□□□□ -2.25
HLA-DQA1P01909 AL606517.2-201ENST00000442855 241 ntBASIC1.01□□□□□ -2.25
HLA-DQA1P01909 AC074290.1-201ENST00000448883 135 ntBASIC1.01□□□□□ -2.25
HLA-DQA1P01909 RNU6-221P-201ENST00000459541 99 ntBASIC1.01□□□□□ -2.25
HLA-DQA1P01909 AC092989.1-201ENST00000481235 277 ntBASIC1.01□□□□□ -2.25
HLA-DQA1P01909 RNU6-1146P-201ENST00000516282 102 ntBASIC1.01□□□□□ -2.25
HLA-DQA1P01909 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.01□□□□□ -2.25
HLA-DQA1P01909 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.01□□□□□ -2.25
HLA-DQA1P01909 AC068338.1-201ENST00000565567 176 ntBASIC1.01□□□□□ -2.25
HLA-DQA1P01909 MIR3683-201ENST00000580847 82 ntBASIC1.01□□□□□ -2.25
HLA-DQA1P01909 MIR4273-201ENST00000582824 84 ntBASIC1.01□□□□□ -2.25
HLA-DQA1P01909 SNORD11B-201ENST00000607707 90 ntBASIC1.01□□□□□ -2.25
HLA-DQA1P01909 MIR3662-201ENST00000637030 95 ntBASIC1.01□□□□□ -2.25
HLA-DQA1P01909 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.01□□□□□ -2.25
HLA-DQA1P01909 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
HLA-DQA1P01909 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1□□□□□ -2.25
HLA-DQA1P01909 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1□□□□□ -2.25
HLA-DQA1P01909 Y_RNA.301-201ENST00000364990 103 ntBASIC1□□□□□ -2.25
HLA-DQA1P01909 RNU6-1240P-201ENST00000365155 104 ntBASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms