Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 RNA5SP220-201ENST00000516298 104 ntBASIC1.76□□□□□ -2.13
PDGFBP01127 AC011604.1-201ENST00000545978 196 ntBASIC1.76□□□□□ -2.13
PDGFBP01127 HSBP1P1-201ENST00000555205 166 ntBASIC1.76□□□□□ -2.13
PDGFBP01127 MIR3169-201ENST00000578032 83 ntBASIC1.76□□□□□ -2.13
PDGFBP01127 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.76□□□□□ -2.13
PDGFBP01127 AC010928.2-201ENST00000588017 287 ntBASIC1.76□□□□□ -2.13
PDGFBP01127 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
PDGFBP01127 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
PDGFBP01127 SNORD81.2-201ENST00000365153 76 ntBASIC1.75□□□□□ -2.13
PDGFBP01127 RNU6-1283P-201ENST00000365314 105 ntBASIC1.75□□□□□ -2.13
PDGFBP01127 RNU6-541P-201ENST00000384709 110 ntBASIC1.75□□□□□ -2.13
PDGFBP01127 SNORA12.2-201ENST00000391040 156 ntBASIC1.75□□□□□ -2.13
PDGFBP01127 MIR548K-201ENST00000408406 116 ntBASIC1.75□□□□□ -2.13
PDGFBP01127 Y_RNA.594-201ENST00000410373 140 ntBASIC1.75□□□□□ -2.13
PDGFBP01127 AC138393.2-201ENST00000414742 246 ntBASIC1.75□□□□□ -2.13
PDGFBP01127 RPL31P63-201ENST00000422565 375 ntBASIC1.75□□□□□ -2.13
PDGFBP01127 MTCO3P46-201ENST00000425787 232 ntBASIC1.75□□□□□ -2.13
PDGFBP01127 MTCO3P29-201ENST00000432119 779 ntBASIC1.75□□□□□ -2.13
PDGFBP01127 RPL23AP7-203ENST00000449021 469 ntBASIC1.75□□□□□ -2.13
PDGFBP01127 MTND3P10-201ENST00000450967 341 ntBASIC1.75□□□□□ -2.13
PDGFBP01127 AL021397.1-201ENST00000451806 248 ntBASIC1.75□□□□□ -2.13
PDGFBP01127 MTCO3P8-201ENST00000453691 755 ntBASIC1.75□□□□□ -2.13
PDGFBP01127 RNU1-123P-201ENST00000458950 160 ntBASIC1.75□□□□□ -2.13
PDGFBP01127 AC025033.1-201ENST00000463883 194 ntBASIC1.75□□□□□ -2.13
PDGFBP01127 HMGN1P12-201ENST00000499125 195 ntBASIC1.75□□□□□ -2.13
PDGFBP01127 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
PDGFBP01127 DEFB131C-201ENST00000528817 165 ntBASIC1.75□□□□□ -2.13
PDGFBP01127 CBX3P8-201ENST00000532412 525 ntBASIC1.75□□□□□ -2.13
PDGFBP01127 AC010900.2-201ENST00000604508 210 ntBASIC1.75□□□□□ -2.13
PDGFBP01127 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.75□□□□□ -2.13
PDGFBP01127 AC103810.8-201ENST00000607347 118 ntBASIC1.75□□□□□ -2.13
PDGFBP01127 AC009229.3-201ENST00000608056 282 ntBASIC1.75□□□□□ -2.13
PDGFBP01127 PISRT1.1-201ENST00000616930 107 ntBASIC1.75□□□□□ -2.13
PDGFBP01127 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.75□□□□□ -2.13
PDGFBP01127 TPTEP1-208ENST00000636884 213 ntBASIC1.75□□□□□ -2.13
PDGFBP01127 AC099654.14-201ENST00000638599 341 ntBASIC1.75□□□□□ -2.13
PDGFBP01127 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
PDGFBP01127 Y_RNA.279-201ENST00000364763 95 ntBASIC1.74□□□□□ -2.13
PDGFBP01127 MIR934-201ENST00000401241 83 ntBASIC1.74□□□□□ -2.13
PDGFBP01127 RNU4-14P-201ENST00000410858 122 ntBASIC1.74□□□□□ -2.13
PDGFBP01127 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.74□□□□□ -2.13
PDGFBP01127 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.74□□□□□ -2.13
PDGFBP01127 AC098614.3-201ENST00000438957 440 ntBASIC1.74□□□□□ -2.13
PDGFBP01127 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.74□□□□□ -2.13
PDGFBP01127 AC116353.2-201ENST00000505332 712 ntBASIC1.74□□□□□ -2.13
PDGFBP01127 RNU1-117P-201ENST00000517041 158 ntBASIC1.74□□□□□ -2.13
PDGFBP01127 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.74□□□□□ -2.13
PDGFBP01127 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.74□□□□□ -2.13
PDGFBP01127 AC009994.1-201ENST00000606889 253 ntBASIC1.74□□□□□ -2.13
PDGFBP01127 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.74□□□□□ -2.13
PDGFBP01127 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.74□□□□□ -2.13
PDGFBP01127 AL590240.4-201ENST00000616908 390 ntBASIC1.74□□□□□ -2.13
PDGFBP01127 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.74□□□□□ -2.13
PDGFBP01127 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.74□□□□□ -2.13
PDGFBP01127 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.74□□□□□ -2.13
PDGFBP01127 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.74□□□□□ -2.13
PDGFBP01127 Y_RNA.88-201ENST00000363029 99 ntBASIC1.73□□□□□ -2.13
PDGFBP01127 RNU6-727P-201ENST00000363592 107 ntBASIC1.73□□□□□ -2.13
PDGFBP01127 Y_RNA.405-201ENST00000383979 100 ntBASIC1.73□□□□□ -2.13
PDGFBP01127 RNU6-418P-201ENST00000384035 107 ntBASIC1.73□□□□□ -2.13
PDGFBP01127 Y_RNA.451-201ENST00000384200 100 ntBASIC1.73□□□□□ -2.13
PDGFBP01127 Y_RNA.524-201ENST00000384564 100 ntBASIC1.73□□□□□ -2.13
PDGFBP01127 Y_RNA.561-201ENST00000384694 100 ntBASIC1.73□□□□□ -2.13
PDGFBP01127 MIR30A-201ENST00000385092 71 ntBASIC1.73□□□□□ -2.13
PDGFBP01127 AC139712.2-201ENST00000424302 339 ntBASIC1.73□□□□□ -2.13
PDGFBP01127 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.73□□□□□ -2.13
PDGFBP01127 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.73□□□□□ -2.13
PDGFBP01127 OR2AQ1P-201ENST00000451972 200 ntBASIC1.73□□□□□ -2.13
PDGFBP01127 RNU7-87P-201ENST00000459343 62 ntBASIC1.73□□□□□ -2.13
PDGFBP01127 RPL30P10-201ENST00000488148 337 ntBASIC1.73□□□□□ -2.13
PDGFBP01127 AC026782.1-201ENST00000512952 449 ntBASIC1.73□□□□□ -2.13
PDGFBP01127 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.73□□□□□ -2.13
PDGFBP01127 AC046134.1-201ENST00000514454 666 ntBASIC1.73□□□□□ -2.13
PDGFBP01127 RNU6-120P-201ENST00000516077 103 ntBASIC1.73□□□□□ -2.13
PDGFBP01127 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.73□□□□□ -2.13
PDGFBP01127 RNA5SP384-201ENST00000516615 116 ntBASIC1.73□□□□□ -2.13
PDGFBP01127 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.73□□□□□ -2.13
PDGFBP01127 AC016256.1-201ENST00000547971 354 ntBASIC1.73□□□□□ -2.13
PDGFBP01127 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.73□□□□□ -2.13
PDGFBP01127 UBL5P4-201ENST00000562584 236 ntBASIC1.73□□□□□ -2.13
PDGFBP01127 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.73□□□□□ -2.13
PDGFBP01127 7SK.7-201ENST00000603504 247 ntBASIC1.73□□□□□ -2.13
PDGFBP01127 RBM11P1-201ENST00000604951 799 ntBASIC1.73□□□□□ -2.13
PDGFBP01127 AC005562.2-201ENST00000618264 111 ntBASIC1.73□□□□□ -2.13
PDGFBP01127 AC137590.2-201ENST00000619709 240 ntBASIC1.73□□□□□ -2.13
PDGFBP01127 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.73□□□□□ -2.13
PDGFBP01127 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.73□□□□□ -2.13
PDGFBP01127 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.73□□□□□ -2.13
PDGFBP01127 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
PDGFBP01127 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.72□□□□□ -2.13
PDGFBP01127 SNORA72.1-201ENST00000363485 129 ntBASIC1.72□□□□□ -2.13
PDGFBP01127 SNORA7.1-201ENST00000363750 139 ntBASIC1.72□□□□□ -2.13
PDGFBP01127 SNORD114-6-201ENST00000364393 72 ntBASIC1.72□□□□□ -2.13
PDGFBP01127 Y_RNA.303-201ENST00000364998 94 ntBASIC1.72□□□□□ -2.13
PDGFBP01127 Y_RNA.404-201ENST00000383978 102 ntBASIC1.72□□□□□ -2.13
PDGFBP01127 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
PDGFBP01127 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.72□□□□□ -2.13
PDGFBP01127 AL117351.2-201ENST00000513571 157 ntBASIC1.72□□□□□ -2.13
PDGFBP01127 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.72□□□□□ -2.13
PDGFBP01127 RNU6-507P-201ENST00000516045 100 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 431 ms