Protein–RNA interactions for Protein: O95786

DDX58, Probable ATP-dependent RNA helicase DDX58, humanhuman

Known RBP Predictions only

Length 925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58O95786 AP000942.3-201ENST00000603702 160 ntBASIC2.17□□□□□ -2.06
DDX58O95786 AC016727.1-205ENST00000605437 569 ntBASIC2.17□□□□□ -2.06
DDX58O95786 AC091932.3-201ENST00000624223 323 ntBASIC2.17□□□□□ -2.06
DDX58O95786 MTND4P12-201ENST00000498999 1377 ntBASIC2.17□□□□□ -2.06
DDX58O95786 AL159152.1-201ENST00000635019 2587 ntBASIC2.17□□□□□ -2.06
DDX58O95786 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.16□□□□□ -2.06
DDX58O95786 Y_RNA.142-201ENST00000363491 102 ntBASIC2.16□□□□□ -2.06
DDX58O95786 Y_RNA.490-201ENST00000384413 102 ntBASIC2.16□□□□□ -2.06
DDX58O95786 SNORA17.3-201ENST00000391159 129 ntBASIC2.16□□□□□ -2.06
DDX58O95786 MIR1283-1-201ENST00000408494 87 ntBASIC2.16□□□□□ -2.06
DDX58O95786 AC009237.7-201ENST00000447357 229 ntBASIC2.16□□□□□ -2.06
DDX58O95786 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.16□□□□□ -2.06
DDX58O95786 SNORD13-201ENST00000459299 104 ntBASIC2.16□□□□□ -2.06
DDX58O95786 Y_RNA.691-201ENST00000516611 103 ntBASIC2.16□□□□□ -2.06
DDX58O95786 RNA5SP364-201ENST00000516938 78 ntBASIC2.16□□□□□ -2.06
DDX58O95786 RNU1-117P-201ENST00000517041 158 ntBASIC2.16□□□□□ -2.06
DDX58O95786 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.16□□□□□ -2.06
DDX58O95786 MIR4448-201ENST00000584360 86 ntBASIC2.16□□□□□ -2.06
DDX58O95786 UBE2V2P2-201ENST00000587677 504 ntBASIC2.16□□□□□ -2.06
DDX58O95786 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.16□□□□□ -2.06
DDX58O95786 RNU6-418P-201ENST00000384035 107 ntBASIC2.15□□□□□ -2.07
DDX58O95786 RNU6-17P-201ENST00000384245 107 ntBASIC2.15□□□□□ -2.07
DDX58O95786 RNU6-18P-201ENST00000384527 107 ntBASIC2.15□□□□□ -2.07
DDX58O95786 SNORA48.1-201ENST00000390879 135 ntBASIC2.15□□□□□ -2.07
DDX58O95786 RNU6-700P-201ENST00000391043 107 ntBASIC2.15□□□□□ -2.07
DDX58O95786 RNU6-1304P-201ENST00000411374 106 ntBASIC2.15□□□□□ -2.07
DDX58O95786 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.15□□□□□ -2.07
DDX58O95786 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.15□□□□□ -2.07
DDX58O95786 AL117351.2-201ENST00000513571 157 ntBASIC2.15□□□□□ -2.07
DDX58O95786 RNA5SP384-201ENST00000516615 116 ntBASIC2.15□□□□□ -2.07
DDX58O95786 RNU6-1213P-201ENST00000517075 94 ntBASIC2.15□□□□□ -2.07
DDX58O95786 AC134698.4-201ENST00000523451 826 ntBASIC2.15□□□□□ -2.07
DDX58O95786 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC2.15□□□□□ -2.07
DDX58O95786 AL109918.3-201ENST00000603072 338 ntBASIC2.15□□□□□ -2.07
DDX58O95786 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.15□□□□□ -2.07
DDX58O95786 AC100812.1-201ENST00000607622 580 ntBASIC2.15□□□□□ -2.07
DDX58O95786 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.15□□□□□ -2.07
DDX58O95786 CENPCP1-201ENST00000533085 2578 ntBASIC2.14□□□□□ -2.07
DDX58O95786 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
DDX58O95786 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
DDX58O95786 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
DDX58O95786 RNY1P16-201ENST00000363063 111 ntBASIC2.14□□□□□ -2.07
DDX58O95786 Y_RNA.140-201ENST00000363474 103 ntBASIC2.14□□□□□ -2.07
DDX58O95786 Y_RNA.404-201ENST00000383978 102 ntBASIC2.14□□□□□ -2.07
DDX58O95786 AL033519.2-201ENST00000403958 392 ntBASIC2.14□□□□□ -2.07
DDX58O95786 RNU4-14P-201ENST00000410858 122 ntBASIC2.14□□□□□ -2.07
DDX58O95786 RNU6-370P-201ENST00000411008 104 ntBASIC2.14□□□□□ -2.07
DDX58O95786 AC004866.1-201ENST00000411748 78 ntBASIC2.14□□□□□ -2.07
DDX58O95786 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.14□□□□□ -2.07
DDX58O95786 RNU7-87P-201ENST00000459343 62 ntBASIC2.14□□□□□ -2.07
DDX58O95786 AC097473.1-201ENST00000508142 408 ntBASIC2.14□□□□□ -2.07
DDX58O95786 RNU6-948P-201ENST00000516374 107 ntBASIC2.14□□□□□ -2.07
DDX58O95786 RNU6-307P-201ENST00000516743 106 ntBASIC2.14□□□□□ -2.07
DDX58O95786 AL121579.1-201ENST00000555129 305 ntBASIC2.14□□□□□ -2.07
DDX58O95786 UBL5P4-201ENST00000562584 236 ntBASIC2.14□□□□□ -2.07
DDX58O95786 AC104581.2-201ENST00000572227 430 ntBASIC2.14□□□□□ -2.07
DDX58O95786 MIR548S-201ENST00000581352 82 ntBASIC2.14□□□□□ -2.07
DDX58O95786 AC005899.2-201ENST00000584353 90 ntBASIC2.14□□□□□ -2.07
DDX58O95786 AC008749.1-201ENST00000597650 306 ntBASIC2.14□□□□□ -2.07
DDX58O95786 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.14□□□□□ -2.07
DDX58O95786 AL355802.3-201ENST00000607571 545 ntBASIC2.14□□□□□ -2.07
DDX58O95786 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.14□□□□□ -2.07
DDX58O95786 AL669831.3-213ENST00000636676 183 ntBASIC2.14□□□□□ -2.07
DDX58O95786 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
DDX58O95786 RNU6-873P-201ENST00000363833 107 ntBASIC2.13□□□□□ -2.07
DDX58O95786 SNORD115-8-201ENST00000363856 82 ntBASIC2.13□□□□□ -2.07
DDX58O95786 SNORD115-38-201ENST00000365037 82 ntBASIC2.13□□□□□ -2.07
DDX58O95786 AL357134.1-201ENST00000445848 426 ntBASIC2.13□□□□□ -2.07
DDX58O95786 ATP5J2P3-201ENST00000451550 258 ntBASIC2.13□□□□□ -2.07
DDX58O95786 AC010531.2-201ENST00000465012 153 ntBASIC2.13□□□□□ -2.07
DDX58O95786 RN7SL274P-201ENST00000492268 272 ntBASIC2.13□□□□□ -2.07
DDX58O95786 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.13□□□□□ -2.07
DDX58O95786 RNVU1-2-201ENST00000516326 135 ntBASIC2.13□□□□□ -2.07
DDX58O95786 SCARNA16.2-201ENST00000516520 172 ntBASIC2.13□□□□□ -2.07
DDX58O95786 AC105029.1-201ENST00000520250 669 ntBASIC2.13□□□□□ -2.07
DDX58O95786 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.13□□□□□ -2.07
DDX58O95786 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.13□□□□□ -2.07
DDX58O95786 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.13□□□□□ -2.07
DDX58O95786 AC027288.2-201ENST00000553028 243 ntBASIC2.13□□□□□ -2.07
DDX58O95786 MIR5094-201ENST00000578766 85 ntBASIC2.13□□□□□ -2.07
DDX58O95786 MIR5690-201ENST00000583739 73 ntBASIC2.13□□□□□ -2.07
DDX58O95786 AC005014.2-201ENST00000607795 599 ntBASIC2.13□□□□□ -2.07
DDX58O95786 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.13□□□□□ -2.07
DDX58O95786 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
DDX58O95786 RNU6-727P-201ENST00000363592 107 ntBASIC2.12□□□□□ -2.07
DDX58O95786 RNU6-280P-201ENST00000364145 104 ntBASIC2.12□□□□□ -2.07
DDX58O95786 RNU6-245P-201ENST00000384020 107 ntBASIC2.12□□□□□ -2.07
DDX58O95786 SNORA67.5-201ENST00000391036 107 ntBASIC2.12□□□□□ -2.07
DDX58O95786 RNU2-40P-201ENST00000410833 196 ntBASIC2.12□□□□□ -2.07
DDX58O95786 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.12□□□□□ -2.07
DDX58O95786 AC108667.1-201ENST00000428618 249 ntBASIC2.12□□□□□ -2.07
DDX58O95786 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.12□□□□□ -2.07
DDX58O95786 MTCO1P44-201ENST00000441935 243 ntBASIC2.12□□□□□ -2.07
DDX58O95786 MTND4P18-201ENST00000447010 465 ntBASIC2.12□□□□□ -2.07
DDX58O95786 AP000870.1-201ENST00000472927 406 ntBASIC2.12□□□□□ -2.07
DDX58O95786 AC093303.1-201ENST00000514549 295 ntBASIC2.12□□□□□ -2.07
DDX58O95786 RNU6-559P-201ENST00000516151 98 ntBASIC2.12□□□□□ -2.07
DDX58O95786 MIR5695-201ENST00000579717 85 ntBASIC2.12□□□□□ -2.07
DDX58O95786 AL096840.1-201ENST00000603287 93 ntBASIC2.12□□□□□ -2.07
DDX58O95786 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms