Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.1□□□□□ -2.07
MBD4O95243 AC011406.1-201ENST00000512440 370 ntBASIC2.1□□□□□ -2.07
MBD4O95243 RNU1-117P-201ENST00000517041 158 ntBASIC2.1□□□□□ -2.07
MBD4O95243 CBX3P8-201ENST00000532412 525 ntBASIC2.1□□□□□ -2.07
MBD4O95243 GNAI2P1-201ENST00000541815 315 ntBASIC2.1□□□□□ -2.07
MBD4O95243 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.1□□□□□ -2.07
MBD4O95243 MIR4769-201ENST00000584126 77 ntBASIC2.1□□□□□ -2.07
MBD4O95243 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.1□□□□□ -2.07
MBD4O95243 AC068205.3-201ENST00000636385 468 ntBASIC2.1□□□□□ -2.07
MBD4O95243 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.09□□□□□ -2.07
MBD4O95243 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.09□□□□□ -2.07
MBD4O95243 MT-TL1-201ENST00000386347 75 ntBASIC2.09□□□□□ -2.07
MBD4O95243 Y_RNA.594-201ENST00000410373 140 ntBASIC2.09□□□□□ -2.07
MBD4O95243 AC060773.1-201ENST00000421698 310 ntBASIC2.09□□□□□ -2.07
MBD4O95243 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.09□□□□□ -2.07
MBD4O95243 RNU6-1041P-201ENST00000516254 102 ntBASIC2.09□□□□□ -2.07
MBD4O95243 RNU6-1146P-201ENST00000516282 102 ntBASIC2.09□□□□□ -2.07
MBD4O95243 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.09□□□□□ -2.07
MBD4O95243 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.09□□□□□ -2.07
MBD4O95243 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.09□□□□□ -2.07
MBD4O95243 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.09□□□□□ -2.07
MBD4O95243 AC245060.5-201ENST00000610778 3293 ntBASIC2.08□□□□□ -2.08
MBD4O95243 Y_RNA.2-201ENST00000362330 96 ntBASIC2.08□□□□□ -2.08
MBD4O95243 RNA5SP432-201ENST00000362480 116 ntBASIC2.08□□□□□ -2.08
MBD4O95243 RNU6-862P-201ENST00000362804 105 ntBASIC2.08□□□□□ -2.08
MBD4O95243 RNU6-112P-201ENST00000363599 104 ntBASIC2.08□□□□□ -2.08
MBD4O95243 RNU1-96P-201ENST00000364163 162 ntBASIC2.08□□□□□ -2.08
MBD4O95243 RNA5SP213-201ENST00000391031 106 ntBASIC2.08□□□□□ -2.08
MBD4O95243 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
MBD4O95243 SUMO2P12-201ENST00000405924 140 ntBASIC2.08□□□□□ -2.08
MBD4O95243 RPL21P111-201ENST00000418453 477 ntBASIC2.08□□□□□ -2.08
MBD4O95243 CST2P1-201ENST00000425770 87 ntBASIC2.08□□□□□ -2.08
MBD4O95243 MTCO3P29-201ENST00000432119 779 ntBASIC2.08□□□□□ -2.08
MBD4O95243 NDUFB4P10-201ENST00000452541 359 ntBASIC2.08□□□□□ -2.08
MBD4O95243 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.08□□□□□ -2.08
MBD4O95243 AP000870.1-201ENST00000472927 406 ntBASIC2.08□□□□□ -2.08
MBD4O95243 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.08□□□□□ -2.08
MBD4O95243 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.08□□□□□ -2.08
MBD4O95243 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.08□□□□□ -2.08
MBD4O95243 AC103810.8-201ENST00000607347 118 ntBASIC2.08□□□□□ -2.08
MBD4O95243 snoZ196.1-201ENST00000625269 89 ntBASIC2.08□□□□□ -2.08
MBD4O95243 AC099654.5-201ENST00000636479 350 ntBASIC2.08□□□□□ -2.08
MBD4O95243 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
MBD4O95243 RNU1-17P-201ENST00000363022 152 ntBASIC2.07□□□□□ -2.08
MBD4O95243 Y_RNA.88-201ENST00000363029 99 ntBASIC2.07□□□□□ -2.08
MBD4O95243 RNU6-793P-201ENST00000384233 104 ntBASIC2.07□□□□□ -2.08
MBD4O95243 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
MBD4O95243 AC099677.2-201ENST00000436385 175 ntBASIC2.07□□□□□ -2.08
MBD4O95243 AC010409.1-201ENST00000487382 476 ntBASIC2.07□□□□□ -2.08
MBD4O95243 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC2.07□□□□□ -2.08
MBD4O95243 Y_RNA.670-201ENST00000516255 105 ntBASIC2.07□□□□□ -2.08
MBD4O95243 SNORA25.15-201ENST00000516487 89 ntBASIC2.07□□□□□ -2.08
MBD4O95243 RNA5SP384-201ENST00000516615 116 ntBASIC2.07□□□□□ -2.08
MBD4O95243 RNU6-307P-201ENST00000516743 106 ntBASIC2.07□□□□□ -2.08
MBD4O95243 SNORA31.17-201ENST00000516953 127 ntBASIC2.07□□□□□ -2.08
MBD4O95243 SNORA44.1-201ENST00000517031 108 ntBASIC2.07□□□□□ -2.08
MBD4O95243 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.07□□□□□ -2.08
MBD4O95243 AL121579.1-201ENST00000555129 305 ntBASIC2.07□□□□□ -2.08
MBD4O95243 UBL5P4-201ENST00000562584 236 ntBASIC2.07□□□□□ -2.08
MBD4O95243 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.07□□□□□ -2.08
MBD4O95243 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
MBD4O95243 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.06□□□□□ -2.08
MBD4O95243 RNU6-661P-201ENST00000362409 107 ntBASIC2.06□□□□□ -2.08
MBD4O95243 Y_RNA.48-201ENST00000362710 103 ntBASIC2.06□□□□□ -2.08
MBD4O95243 U3.8-201ENST00000363675 217 ntBASIC2.06□□□□□ -2.08
MBD4O95243 RNU6-1019P-201ENST00000364424 107 ntBASIC2.06□□□□□ -2.08
MBD4O95243 MIR10B-201ENST00000385011 110 ntBASIC2.06□□□□□ -2.08
MBD4O95243 RNU6-700P-201ENST00000391043 107 ntBASIC2.06□□□□□ -2.08
MBD4O95243 AL117342.1-201ENST00000404861 406 ntBASIC2.06□□□□□ -2.08
MBD4O95243 RNA5SP504-201ENST00000410676 117 ntBASIC2.06□□□□□ -2.08
MBD4O95243 RNU6-57P-201ENST00000411348 103 ntBASIC2.06□□□□□ -2.08
MBD4O95243 EBAG9P1-201ENST00000418955 543 ntBASIC2.06□□□□□ -2.08
MBD4O95243 AC007098.1-201ENST00000420122 367 ntBASIC2.06□□□□□ -2.08
MBD4O95243 AC008134.1-201ENST00000420943 193 ntBASIC2.06□□□□□ -2.08
MBD4O95243 MTND3P23-201ENST00000431980 347 ntBASIC2.06□□□□□ -2.08
MBD4O95243 AC069257.2-201ENST00000441819 155 ntBASIC2.06□□□□□ -2.08
MBD4O95243 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.06□□□□□ -2.08
MBD4O95243 AC116353.2-201ENST00000505332 712 ntBASIC2.06□□□□□ -2.08
MBD4O95243 RNU6-1114P-201ENST00000516022 107 ntBASIC2.06□□□□□ -2.08
MBD4O95243 MIR5701-3-201ENST00000578890 82 ntBASIC2.06□□□□□ -2.08
MBD4O95243 MIR3683-201ENST00000580847 82 ntBASIC2.06□□□□□ -2.08
MBD4O95243 AC005899.2-201ENST00000584353 90 ntBASIC2.06□□□□□ -2.08
MBD4O95243 MIR5701-1-201ENST00000585138 82 ntBASIC2.06□□□□□ -2.08
MBD4O95243 AL355802.3-201ENST00000607571 545 ntBASIC2.06□□□□□ -2.08
MBD4O95243 AC009229.3-201ENST00000608056 282 ntBASIC2.06□□□□□ -2.08
MBD4O95243 WT1-AS_8.1-201ENST00000615200 275 ntBASIC2.06□□□□□ -2.08
MBD4O95243 MIR5701-2-201ENST00000615634 82 ntBASIC2.06□□□□□ -2.08
MBD4O95243 PISRT1.1-201ENST00000616930 107 ntBASIC2.06□□□□□ -2.08
MBD4O95243 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.06□□□□□ -2.08
MBD4O95243 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
MBD4O95243 snoU2-30.2-201ENST00000362805 70 ntBASIC2.05□□□□□ -2.08
MBD4O95243 Y_RNA.179-201ENST00000363844 90 ntBASIC2.05□□□□□ -2.08
MBD4O95243 RNA5SP190-201ENST00000365222 118 ntBASIC2.05□□□□□ -2.08
MBD4O95243 MIR520A-201ENST00000384862 85 ntBASIC2.05□□□□□ -2.08
MBD4O95243 MIR515-2-201ENST00000384883 83 ntBASIC2.05□□□□□ -2.08
MBD4O95243 MIR515-1-201ENST00000384884 83 ntBASIC2.05□□□□□ -2.08
MBD4O95243 RNU1-139P-201ENST00000391307 165 ntBASIC2.05□□□□□ -2.08
MBD4O95243 USP9YP16-201ENST00000430287 407 ntBASIC2.05□□□□□ -2.08
MBD4O95243 USP9YP23-201ENST00000455085 407 ntBASIC2.05□□□□□ -2.08
MBD4O95243 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms