Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 AC078899.2-201ENST00000595282 212 ntBASIC1.6□□□□□ -2.15
ZNF253O75346 AC008749.1-201ENST00000597650 306 ntBASIC1.6□□□□□ -2.15
ZNF253O75346 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.6□□□□□ -2.15
ZNF253O75346 AC090971.5-201ENST00000621102 293 ntBASIC1.6□□□□□ -2.15
ZNF253O75346 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.6□□□□□ -2.15
ZNF253O75346 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.59□□□□□ -2.15
ZNF253O75346 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC1.59□□□□□ -2.15
ZNF253O75346 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.59□□□□□ -2.15
ZNF253O75346 Y_RNA.314-201ENST00000365114 102 ntBASIC1.59□□□□□ -2.15
ZNF253O75346 RNU6-1145P-201ENST00000384246 107 ntBASIC1.59□□□□□ -2.15
ZNF253O75346 RNU6-975P-201ENST00000384296 105 ntBASIC1.59□□□□□ -2.15
ZNF253O75346 MIR329-1-201ENST00000385028 80 ntBASIC1.59□□□□□ -2.15
ZNF253O75346 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
ZNF253O75346 MIR1283-2-201ENST00000408621 87 ntBASIC1.59□□□□□ -2.15
ZNF253O75346 AC114482.1-201ENST00000418010 247 ntBASIC1.59□□□□□ -2.15
ZNF253O75346 KRTAP19-11P-201ENST00000439851 104 ntBASIC1.59□□□□□ -2.15
ZNF253O75346 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.59□□□□□ -2.15
ZNF253O75346 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.59□□□□□ -2.15
ZNF253O75346 AC067942.3-201ENST00000512025 362 ntBASIC1.59□□□□□ -2.15
ZNF253O75346 RN7SKP49-201ENST00000516675 260 ntBASIC1.59□□□□□ -2.15
ZNF253O75346 RNU6-856P-201ENST00000516959 98 ntBASIC1.59□□□□□ -2.15
ZNF253O75346 CYCSP23-201ENST00000519781 313 ntBASIC1.59□□□□□ -2.15
ZNF253O75346 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.59□□□□□ -2.15
ZNF253O75346 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.59□□□□□ -2.15
ZNF253O75346 AP002770.2-201ENST00000543613 532 ntBASIC1.59□□□□□ -2.15
ZNF253O75346 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.59□□□□□ -2.15
ZNF253O75346 MIR4529-201ENST00000578110 78 ntBASIC1.59□□□□□ -2.15
ZNF253O75346 MZT1P2-201ENST00000604387 248 ntBASIC1.59□□□□□ -2.15
ZNF253O75346 uc_338.22-201ENST00000622722 187 ntBASIC1.59□□□□□ -2.15
ZNF253O75346 MIR4272-201ENST00000635924 64 ntBASIC1.59□□□□□ -2.15
ZNF253O75346 MTND5P35-201ENST00000557537 1720 ntBASIC1.59□□□□□ -2.16
ZNF253O75346 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.59□□□□□ -2.16
ZNF253O75346 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.59□□□□□ -2.16
ZNF253O75346 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
ZNF253O75346 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
ZNF253O75346 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
ZNF253O75346 AL136360.1-201ENST00000503377 1900 ntBASIC1.58□□□□□ -2.16
ZNF253O75346 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
ZNF253O75346 Y_RNA.11-201ENST00000362375 109 ntBASIC1.58□□□□□ -2.16
ZNF253O75346 RNU1-58P-201ENST00000362413 163 ntBASIC1.58□□□□□ -2.16
ZNF253O75346 RNA5SP361-201ENST00000362686 118 ntBASIC1.58□□□□□ -2.16
ZNF253O75346 Y_RNA.132-201ENST00000363421 102 ntBASIC1.58□□□□□ -2.16
ZNF253O75346 SNORA16B-201ENST00000364674 135 ntBASIC1.58□□□□□ -2.16
ZNF253O75346 Y_RNA.394-201ENST00000383942 103 ntBASIC1.58□□□□□ -2.16
ZNF253O75346 Y_RNA.415-201ENST00000384012 112 ntBASIC1.58□□□□□ -2.16
ZNF253O75346 RNU6-318P-201ENST00000384283 103 ntBASIC1.58□□□□□ -2.16
ZNF253O75346 RNU6-1235P-201ENST00000384559 107 ntBASIC1.58□□□□□ -2.16
ZNF253O75346 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
ZNF253O75346 RNA5SP465-201ENST00000391195 109 ntBASIC1.58□□□□□ -2.16
ZNF253O75346 AL033519.2-201ENST00000403958 392 ntBASIC1.58□□□□□ -2.16
ZNF253O75346 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.58□□□□□ -2.16
ZNF253O75346 AC139712.2-201ENST00000424302 339 ntBASIC1.58□□□□□ -2.16
ZNF253O75346 AC010095.1-201ENST00000443543 144 ntBASIC1.58□□□□□ -2.16
ZNF253O75346 AC007677.1-201ENST00000445757 515 ntBASIC1.58□□□□□ -2.16
ZNF253O75346 AC074290.1-201ENST00000448883 135 ntBASIC1.58□□□□□ -2.16
ZNF253O75346 CHEK2P4-201ENST00000450340 246 ntBASIC1.58□□□□□ -2.16
ZNF253O75346 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.58□□□□□ -2.16
ZNF253O75346 RNU6-498P-201ENST00000459468 107 ntBASIC1.58□□□□□ -2.16
ZNF253O75346 RNU1-117P-201ENST00000517041 158 ntBASIC1.58□□□□□ -2.16
ZNF253O75346 AC022868.1-201ENST00000517767 391 ntBASIC1.58□□□□□ -2.16
ZNF253O75346 AK6P2-201ENST00000549020 471 ntBASIC1.58□□□□□ -2.16
ZNF253O75346 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.58□□□□□ -2.16
ZNF253O75346 MIR3122-201ENST00000577243 73 ntBASIC1.58□□□□□ -2.16
ZNF253O75346 MIR3169-201ENST00000578032 83 ntBASIC1.58□□□□□ -2.16
ZNF253O75346 AL078596.1-201ENST00000624856 447 ntBASIC1.58□□□□□ -2.16
ZNF253O75346 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.58□□□□□ -2.16
ZNF253O75346 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.58□□□□□ -2.16
ZNF253O75346 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.58□□□□□ -2.16
ZNF253O75346 MIR369-201ENST00000362155 70 ntBASIC1.57□□□□□ -2.16
ZNF253O75346 SNORD115-3-201ENST00000363100 82 ntBASIC1.57□□□□□ -2.16
ZNF253O75346 U3.8-201ENST00000363675 217 ntBASIC1.57□□□□□ -2.16
ZNF253O75346 RNU6-879P-201ENST00000364328 108 ntBASIC1.57□□□□□ -2.16
ZNF253O75346 RNU6-1305P-201ENST00000364353 104 ntBASIC1.57□□□□□ -2.16
ZNF253O75346 SNORD114-6-201ENST00000364393 72 ntBASIC1.57□□□□□ -2.16
ZNF253O75346 RNY3P4-201ENST00000384428 101 ntBASIC1.57□□□□□ -2.16
ZNF253O75346 Y_RNA.595-201ENST00000410403 105 ntBASIC1.57□□□□□ -2.16
ZNF253O75346 BX510359.4-201ENST00000423750 193 ntBASIC1.57□□□□□ -2.16
ZNF253O75346 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.57□□□□□ -2.16
ZNF253O75346 AC055731.1-201ENST00000474387 401 ntBASIC1.57□□□□□ -2.16
ZNF253O75346 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.57□□□□□ -2.16
ZNF253O75346 RNU2-19P-201ENST00000517288 84 ntBASIC1.57□□□□□ -2.16
ZNF253O75346 AL442163.3-201ENST00000554110 156 ntBASIC1.57□□□□□ -2.16
ZNF253O75346 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.57□□□□□ -2.16
ZNF253O75346 VN1R91P-201ENST00000594377 169 ntBASIC1.57□□□□□ -2.16
ZNF253O75346 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.57□□□□□ -2.16
ZNF253O75346 AL138825.1-201ENST00000618587 192 ntBASIC1.57□□□□□ -2.16
ZNF253O75346 U2.1-201ENST00000618978 145 ntBASIC1.57□□□□□ -2.16
ZNF253O75346 AC130454.1-201ENST00000622948 401 ntBASIC1.57□□□□□ -2.16
ZNF253O75346 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.57□□□□□ -2.16
ZNF253O75346 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
ZNF253O75346 AC092881.1-201ENST00000638218 2733 ntBASIC1.56□□□□□ -2.16
ZNF253O75346 RNU6-727P-201ENST00000363592 107 ntBASIC1.56□□□□□ -2.16
ZNF253O75346 RNU6-525P-201ENST00000363685 104 ntBASIC1.56□□□□□ -2.16
ZNF253O75346 RNA5SP493-201ENST00000364115 91 ntBASIC1.56□□□□□ -2.16
ZNF253O75346 RNY3P11-201ENST00000364153 102 ntBASIC1.56□□□□□ -2.16
ZNF253O75346 SNORD87-201ENST00000364849 89 ntBASIC1.56□□□□□ -2.16
ZNF253O75346 RNY1P14-201ENST00000384426 108 ntBASIC1.56□□□□□ -2.16
ZNF253O75346 MIR17-201ENST00000385012 84 ntBASIC1.56□□□□□ -2.16
ZNF253O75346 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
ZNF253O75346 SNORA11.4-201ENST00000408823 129 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 171.4 ms