Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 Y_RNA.201-201ENST00000364052 96 ntBASIC0.66□□□□□ -2.3
GMDSO60547 Y_RNA.363-201ENST00000365529 113 ntBASIC0.66□□□□□ -2.3
GMDSO60547 RNU6-245P-201ENST00000384020 107 ntBASIC0.66□□□□□ -2.3
GMDSO60547 SNORA67.2-201ENST00000384300 149 ntBASIC0.66□□□□□ -2.3
GMDSO60547 SNORA12.1-201ENST00000390873 148 ntBASIC0.66□□□□□ -2.3
GMDSO60547 RNA5SP219-201ENST00000390940 113 ntBASIC0.66□□□□□ -2.3
GMDSO60547 MIR942-201ENST00000401111 86 ntBASIC0.66□□□□□ -2.3
GMDSO60547 RNU6-1186P-201ENST00000410429 97 ntBASIC0.66□□□□□ -2.3
GMDSO60547 RPS3AP1-201ENST00000413190 320 ntBASIC0.66□□□□□ -2.3
GMDSO60547 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC0.66□□□□□ -2.3
GMDSO60547 AC004941.2-201ENST00000427009 228 ntBASIC0.66□□□□□ -2.3
GMDSO60547 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.66□□□□□ -2.3
GMDSO60547 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.66□□□□□ -2.3
GMDSO60547 BET1P1-201ENST00000482276 359 ntBASIC0.66□□□□□ -2.3
GMDSO60547 RNU7-99P-201ENST00000516271 62 ntBASIC0.66□□□□□ -2.3
GMDSO60547 SCOCP1-201ENST00000554676 349 ntBASIC0.66□□□□□ -2.3
GMDSO60547 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.66□□□□□ -2.3
GMDSO60547 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.66□□□□□ -2.3
GMDSO60547 AC004223.2-201ENST00000590309 544 ntBASIC0.66□□□□□ -2.3
GMDSO60547 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.66□□□□□ -2.3
GMDSO60547 AC136443.5-201ENST00000603741 370 ntBASIC0.66□□□□□ -2.3
GMDSO60547 MIR6504-201ENST00000613520 61 ntBASIC0.66□□□□□ -2.3
GMDSO60547 Y_RNA.4-201ENST00000362333 112 ntBASIC0.65□□□□□ -2.31
GMDSO60547 RNU6-996P-201ENST00000365438 107 ntBASIC0.65□□□□□ -2.31
GMDSO60547 AL606923.1-201ENST00000406616 190 ntBASIC0.65□□□□□ -2.31
GMDSO60547 AL365203.2-201ENST00000423444 196 ntBASIC0.65□□□□□ -2.31
GMDSO60547 NDUFB4P10-201ENST00000452541 359 ntBASIC0.65□□□□□ -2.31
GMDSO60547 SNRPGP9-201ENST00000456025 225 ntBASIC0.65□□□□□ -2.31
GMDSO60547 RNU6-1198P-201ENST00000516904 67 ntBASIC0.65□□□□□ -2.31
GMDSO60547 APOOP3-201ENST00000536787 586 ntBASIC0.65□□□□□ -2.31
GMDSO60547 MTATP6P3-201ENST00000581686 676 ntBASIC0.65□□□□□ -2.31
GMDSO60547 HULC.1-201ENST00000612720 240 ntBASIC0.65□□□□□ -2.31
GMDSO60547 MIR8070-201ENST00000616510 88 ntBASIC0.65□□□□□ -2.31
GMDSO60547 AC139792.3-201ENST00000623525 224 ntBASIC0.65□□□□□ -2.31
GMDSO60547 FER-210ENST00000628534 558 ntTSL 5 BASIC0.65□□□□□ -2.31
GMDSO60547 RNU4-21P-201ENST00000362802 126 ntBASIC0.64□□□□□ -2.31
GMDSO60547 RNU6-82P-201ENST00000363970 107 ntBASIC0.64□□□□□ -2.31
GMDSO60547 RNU6-1317P-201ENST00000364582 104 ntBASIC0.64□□□□□ -2.31
GMDSO60547 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.64□□□□□ -2.31
GMDSO60547 MTCO2P11-201ENST00000431069 680 ntBASIC0.64□□□□□ -2.31
GMDSO60547 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.64□□□□□ -2.31
GMDSO60547 MTND5P15-201ENST00000434246 349 ntBASIC0.64□□□□□ -2.31
GMDSO60547 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.64□□□□□ -2.31
GMDSO60547 MTND1P27-201ENST00000451117 902 ntBASIC0.64□□□□□ -2.31
GMDSO60547 RNU6-189P-201ENST00000516120 101 ntBASIC0.64□□□□□ -2.31
GMDSO60547 RNU6-947P-201ENST00000516264 106 ntBASIC0.64□□□□□ -2.31
GMDSO60547 RNU6-759P-201ENST00000516740 103 ntBASIC0.64□□□□□ -2.31
GMDSO60547 RNU1-117P-201ENST00000517041 158 ntBASIC0.64□□□□□ -2.31
GMDSO60547 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC0.64□□□□□ -2.31
GMDSO60547 MTND1P35-201ENST00000526739 508 ntBASIC0.64□□□□□ -2.31
GMDSO60547 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
GMDSO60547 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.64□□□□□ -2.31
GMDSO60547 AC080078.2-201ENST00000603766 501 ntBASIC0.64□□□□□ -2.31
GMDSO60547 AC027449.1-201ENST00000608890 407 ntBASIC0.64□□□□□ -2.31
GMDSO60547 RMST_3.1-201ENST00000611651 109 ntBASIC0.64□□□□□ -2.31
GMDSO60547 U6.73-201ENST00000619194 103 ntBASIC0.64□□□□□ -2.31
GMDSO60547 SRP54-214ENST00000630962 162 ntTSL 5 BASIC0.64□□□□□ -2.31
GMDSO60547 OR5AK4P-201ENST00000635912 903 ntBASIC0.64□□□□□ -2.31
GMDSO60547 ZNF204P-201ENST00000416749 2397 ntBASIC0.64□□□□□ -2.31
GMDSO60547 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.64□□□□□ -2.31
GMDSO60547 SNORA2.2-201ENST00000365473 135 ntBASIC0.63□□□□□ -2.31
GMDSO60547 RNU6-1329P-201ENST00000365664 107 ntBASIC0.63□□□□□ -2.31
GMDSO60547 RNU6-110P-201ENST00000384508 104 ntBASIC0.63□□□□□ -2.31
GMDSO60547 MIR605-201ENST00000385078 83 ntBASIC0.63□□□□□ -2.31
GMDSO60547 MT-TH-201ENST00000387441 69 ntBASIC0.63□□□□□ -2.31
GMDSO60547 AF228730.1-201ENST00000397972 663 ntBASIC0.63□□□□□ -2.31
GMDSO60547 AL049545.1-201ENST00000401856 572 ntBASIC0.63□□□□□ -2.31
GMDSO60547 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.63□□□□□ -2.31
GMDSO60547 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.63□□□□□ -2.31
GMDSO60547 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.63□□□□□ -2.31
GMDSO60547 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.63□□□□□ -2.31
GMDSO60547 MIR3915-201ENST00000578518 97 ntBASIC0.63□□□□□ -2.31
GMDSO60547 AC064836.2-201ENST00000609491 462 ntBASIC0.63□□□□□ -2.31
GMDSO60547 MIR8076-201ENST00000611401 83 ntBASIC0.63□□□□□ -2.31
GMDSO60547 AC007494.3-201ENST00000624660 743 ntBASIC0.63□□□□□ -2.31
GMDSO60547 CASC19-280ENST00000642102 1351 ntBASIC0.62□□□□□ -2.31
GMDSO60547 SNORA25.9-201ENST00000365087 128 ntBASIC0.62□□□□□ -2.31
GMDSO60547 RNU5A-6P-201ENST00000384136 116 ntBASIC0.62□□□□□ -2.31
GMDSO60547 RNU6-784P-201ENST00000384330 106 ntBASIC0.62□□□□□ -2.31
GMDSO60547 RNU6-933P-201ENST00000384424 107 ntBASIC0.62□□□□□ -2.31
GMDSO60547 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC0.62□□□□□ -2.31
GMDSO60547 RNU6-733P-201ENST00000410759 104 ntBASIC0.62□□□□□ -2.31
GMDSO60547 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.62□□□□□ -2.31
GMDSO60547 MTCYBP8-201ENST00000422855 651 ntBASIC0.62□□□□□ -2.31
GMDSO60547 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.62□□□□□ -2.31
GMDSO60547 FABP5P4-201ENST00000437203 171 ntBASIC0.62□□□□□ -2.31
GMDSO60547 MTCO2P18-201ENST00000457151 658 ntBASIC0.62□□□□□ -2.31
GMDSO60547 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC0.62□□□□□ -2.31
GMDSO60547 RNU4ATAC8P-201ENST00000516196 109 ntBASIC0.62□□□□□ -2.31
GMDSO60547 MIR4778-201ENST00000577635 80 ntBASIC0.62□□□□□ -2.31
GMDSO60547 FAM106DP-201ENST00000586416 501 ntBASIC0.62□□□□□ -2.31
GMDSO60547 MIR6835-201ENST00000621552 64 ntBASIC0.62□□□□□ -2.31
GMDSO60547 AP000568.1-201ENST00000282964 442 ntBASIC0.61□□□□□ -2.31
GMDSO60547 U3.8-201ENST00000363675 217 ntBASIC0.61□□□□□ -2.31
GMDSO60547 Y_RNA.164-201ENST00000363709 102 ntBASIC0.61□□□□□ -2.31
GMDSO60547 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
GMDSO60547 RNU6-969P-201ENST00000383900 105 ntBASIC0.61□□□□□ -2.31
GMDSO60547 MIR487A-201ENST00000385009 80 ntBASIC0.61□□□□□ -2.31
GMDSO60547 SNORD41-201ENST00000386967 70 ntBASIC0.61□□□□□ -2.31
GMDSO60547 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms